RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 NHSQ6T4R5 1651 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 KAT6BQ8WYB5 2073 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 NUP188Q5SRE5 1749 aa8.83□□□□□ -1
TOPBP1-203ENST00000503464 ARFGEF2Q9Y6D5 1785 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 EXOC5O00471 708 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 SLC4A2P04920 1241 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 FAM98CQ17RN3 349 aaKnown RBP8.82□□□□□ -1
TOPBP1-203ENST00000503464 PROSER3Q2NL68 480 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 HDGFL1Q5TGJ6 251 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 CHPF2Q9P2E5 772 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 BTAF1O14981 1849 aa8.82□□□□□ -1
TOPBP1-203ENST00000503464 RREB1Q92766 1687 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 COL5A3P25940 1745 aaPredicted RBP8.81□□□□□ -1
TOPBP1-203ENST00000503464 IPO8O15397 1037 aaKnown RBP8.81□□□□□ -1
TOPBP1-203ENST00000503464 ANXA1P04083 346 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 PDIA6Q15084 440 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 DDB1Q16531 1140 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 CCDC30Q5VVM6 783 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 LHX8Q68G74 356 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 PIGBQ92521 554 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 CCDC9Q9Y3X0 531 aaKnown RBP8.81□□□□□ -1
TOPBP1-203ENST00000503464 PXDNLA1KZ92 1463 aa8.81□□□□□ -1
TOPBP1-203ENST00000503464 PTPRCP08575 1304 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 EIF2S2P20042 333 aaKnown RBP8.8□□□□□ -1
TOPBP1-203ENST00000503464 FLIIQ13045 1269 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 MEX3CQ5U5Q3 659 aaKnown RBP8.8□□□□□ -1
TOPBP1-203ENST00000503464 LRP10Q7Z4F1 713 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 FTSJ3Q8IY81 847 aaKnown RBP8.8□□□□□ -1
TOPBP1-203ENST00000503464 CCDC136Q96JN2 1154 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
TOPBP1-203ENST00000503464 PHAXQ9H814 394 aaKnown RBP8.8□□□□□ -1
TOPBP1-203ENST00000503464 ATG3Q9NT62 314 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 TMOD3Q9NYL9 352 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 ASAP1Q9ULH1 1129 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 PCDHB15Q9Y5E8 787 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 USP16Q9Y5T5 823 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 ZNF831Q5JPB2 1677 aa8.8□□□□□ -1
TOPBP1-203ENST00000503464 ADCY9O60503 1353 aa8.79□□□□□ -1
TOPBP1-203ENST00000503464 F6X3S4 739 aa8.79□□□□□ -1
TOPBP1-203ENST00000503464 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
TOPBP1-203ENST00000503464 ITPRIPQ8IWB1 547 aa8.79□□□□□ -1
TOPBP1-203ENST00000503464 GJD4Q96KN9 370 aaPredicted RBP8.79□□□□□ -1
TOPBP1-203ENST00000503464 FMNL2Q96PY5 1086 aa8.79□□□□□ -1
TOPBP1-203ENST00000503464 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
TOPBP1-203ENST00000503464 STK31Q9BXU1 1019 aa8.79□□□□□ -1
TOPBP1-203ENST00000503464 AFDNP55196 1824 aaKnown RBP8.78□□□□□ -1
TOPBP1-203ENST00000503464 LY75O60449 1722 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
TOPBP1-203ENST00000503464 ONECUT3O60422 494 aaPredicted RBP8.78□□□□□ -1
TOPBP1-203ENST00000503464 IGHDP01880 384 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 SNRPA1P09661 255 aaKnown RBP8.78□□□□□ -1
TOPBP1-203ENST00000503464 MS4A1P11836 297 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 PRIM1P49642 420 aaKnown RBP8.78□□□□□ -1
TOPBP1-203ENST00000503464 TTC5Q8N0Z6 440 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 ZBTB40Q9NUA8 1239 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 DDX19BQ9UMR2 479 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 MYH14Q7Z406 1995 aaKnown RBP8.78□□□□□ -1
TOPBP1-203ENST00000503464 ATP10DQ9P241 1426 aa8.78□□□□□ -1
TOPBP1-203ENST00000503464 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 PTF1AQ7RTS3 328 aa8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 ACSBG1Q96GR2 724 aa8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 DDX21Q9NR30 783 aaKnown RBP eCLIP8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 TRPC5Q9UL62 973 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 TAF1LQ8IZX4 1826 aa8.77□□□□□ -1.01
TOPBP1-203ENST00000503464 KCNQ2O43526 872 aa8.76□□□□□ -1.01
TOPBP1-203ENST00000503464 FKBP5Q13451 457 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-203ENST00000503464 REM2Q8IYK8 340 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-203ENST00000503464 ANKRD36CQ5JPF3 1778 aa8.76□□□□□ -1.01
TOPBP1-203ENST00000503464 FXR2P51116 673 aaKnown RBP eCLIP8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 AAMPQ13685 434 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 POLA2Q14181 598 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 FAM182BQ5T319 152 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 SKAP1Q86WV1 359 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 DNAJC10Q8IXB1 793 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 MEIS3Q99687 375 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 QTRT2Q9H974 415 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-203ENST00000503464 PI4KAP2A4QPH2 592 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 A1BGP04217 495 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 MYL6BP14649 208 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 CCT4P50991 539 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 BEND3Q5T5X7 828 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 ILDR1Q86SU0 546 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 SIRT2Q8IXJ6 389 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 SEPT12Q8IYM1 358 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 PI4KAP1Q8N8J0 262 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 XAGE3Q8WTP9 111 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 SYTL4Q96C24 671 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 HYPKQ9NX55 129 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
TOPBP1-203ENST00000503464 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms