RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 PARP3Q9Y6F1 533 aa23.38■■□□□ 1.33
NECAB3-216ENST00000498353 ZPR1O75312 459 aa23.37■■□□□ 1.33
NECAB3-216ENST00000498353 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
NECAB3-216ENST00000498353 MYBBP1AQ9BQG0 1328 aaKnown RBP23.36■■□□□ 1.33
NECAB3-216ENST00000498353 KCNQ3O43525 872 aa23.36■■□□□ 1.33
NECAB3-216ENST00000498353 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
NECAB3-216ENST00000498353 NARFQ9UHQ1 456 aa23.36■■□□□ 1.33
NECAB3-216ENST00000498353 COL15A1P39059 1388 aa23.36■■□□□ 1.33
NECAB3-216ENST00000498353 TGFB2P61812 414 aa23.35■■□□□ 1.33
NECAB3-216ENST00000498353 USPL1Q5W0Q7 1092 aa23.35■■□□□ 1.33
NECAB3-216ENST00000498353 CANXP27824 592 aaKnown RBP23.34■■□□□ 1.33
NECAB3-216ENST00000498353 TM4SF1P30408 202 aa23.34■■□□□ 1.33
NECAB3-216ENST00000498353 EIF5P55010 431 aaKnown RBP23.34■■□□□ 1.33
NECAB3-216ENST00000498353 C10orf71Q711Q0 1435 aa23.33■■□□□ 1.33
NECAB3-216ENST00000498353 TAF7Q15545 349 aaPredicted RBP23.33■■□□□ 1.33
NECAB3-216ENST00000498353 NFE2L2Q16236 605 aa23.33■■□□□ 1.33
NECAB3-216ENST00000498353 CHD4Q14839 1912 aa23.32■■□□□ 1.32
NECAB3-216ENST00000498353 DDR1Q08345 913 aa23.32■■□□□ 1.32
NECAB3-216ENST00000498353 MAPK8IP3Q9UPT6 1336 aa23.32■■□□□ 1.32
NECAB3-216ENST00000498353 A0A087WZG4 1122 aa23.31■■□□□ 1.32
NECAB3-216ENST00000498353 IL6STP40189 918 aaPredicted RBP23.31■■□□□ 1.32
NECAB3-216ENST00000498353 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
NECAB3-216ENST00000498353 PXDNLA1KZ92 1463 aa23.3■■□□□ 1.32
NECAB3-216ENST00000498353 BCL2L12Q9HB09 334 aa23.3■■□□□ 1.32
NECAB3-216ENST00000498353 POLRMTO00411 1230 aaKnown RBP23.29■■□□□ 1.32
NECAB3-216ENST00000498353 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
NECAB3-216ENST00000498353 ZNF784Q8NCA9 323 aaPredicted RBP23.29■■□□□ 1.32
NECAB3-216ENST00000498353 USP16Q9Y5T5 823 aa23.29■■□□□ 1.32
NECAB3-216ENST00000498353 A1BGP04217 495 aa23.28■■□□□ 1.32
NECAB3-216ENST00000498353 PRKRIP1Q9H875 184 aaPredicted RBP23.28■■□□□ 1.32
NECAB3-216ENST00000498353 A0A0G2JLW4 131 aa23.27■■□□□ 1.32
NECAB3-216ENST00000498353 NFIXQ14938 502 aa23.27■■□□□ 1.32
NECAB3-216ENST00000498353 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
NECAB3-216ENST00000498353 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.32
NECAB3-216ENST00000498353 KIAA1551Q9HCM1 1747 aa23.26■■□□□ 1.31
NECAB3-216ENST00000498353 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
NECAB3-216ENST00000498353 MIS18AQ9NYP9 233 aa23.26■■□□□ 1.31
NECAB3-216ENST00000498353 DPEP1P16444 411 aa23.25■■□□□ 1.31
NECAB3-216ENST00000498353 DLG5Q8TDM6 1919 aa23.24■■□□□ 1.31
NECAB3-216ENST00000498353 NPM2Q86SE8 214 aaKnown RBP23.24■■□□□ 1.31
NECAB3-216ENST00000498353 KCNA3P22001 575 aa23.23■■□□□ 1.31
NECAB3-216ENST00000498353 RIPK4P57078 832 aa23.23■■□□□ 1.31
NECAB3-216ENST00000498353 THUMPD2Q9BTF0 503 aaKnown RBP23.23■■□□□ 1.31
NECAB3-216ENST00000498353 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
NECAB3-216ENST00000498353 ZNF330Q9Y3S2 320 aaPredicted RBP23.23■■□□□ 1.31
NECAB3-216ENST00000498353 SERPINB2P05120 415 aa23.22■■□□□ 1.31
NECAB3-216ENST00000498353 TMPOP42166 694 aaKnown RBP23.21■■□□□ 1.31
NECAB3-216ENST00000498353 N4BP2Q86UW6 1770 aaPredicted RBP23.2■■□□□ 1.3
NECAB3-216ENST00000498353 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
NECAB3-216ENST00000498353 BCS1LQ9Y276 419 aa23.2■■□□□ 1.3
NECAB3-216ENST00000498353 CAMTA2O94983 1202 aa23.19■■□□□ 1.3
NECAB3-216ENST00000498353 PIP4K2AP48426 406 aaPredicted RBP23.19■■□□□ 1.3
NECAB3-216ENST00000498353 EIF4A1P60842 406 aaKnown RBP23.19■■□□□ 1.3
NECAB3-216ENST00000498353 TBC1D9BQ66K14 1250 aa23.19■■□□□ 1.3
NECAB3-216ENST00000498353 DZIP3Q86Y13 1208 aaKnown RBP23.19■■□□□ 1.3
NECAB3-216ENST00000498353 PIM2Q9P1W9 311 aa23.19■■□□□ 1.3
NECAB3-216ENST00000498353 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
NECAB3-216ENST00000498353 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
NECAB3-216ENST00000498353 LMOD3Q0VAK6 560 aa23.18■■□□□ 1.3
NECAB3-216ENST00000498353 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
NECAB3-216ENST00000498353 BICDL1Q6ZP65 573 aa23.18■■□□□ 1.3
NECAB3-216ENST00000498353 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
NECAB3-216ENST00000498353 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
NECAB3-216ENST00000498353 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
NECAB3-216ENST00000498353 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
NECAB3-216ENST00000498353 NRXN2Q9P2S2 1712 aa23.17■■□□□ 1.3
NECAB3-216ENST00000498353 CCDC146Q8IYE0 955 aa23.17■■□□□ 1.3
NECAB3-216ENST00000498353 SCN7AQ01118 1682 aa23.16■■□□□ 1.3
NECAB3-216ENST00000498353 CHRNA5P30532 468 aa23.16■■□□□ 1.3
NECAB3-216ENST00000498353 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
NECAB3-216ENST00000498353 CLEC4GQ6UXB4 293 aa23.15■■□□□ 1.3
NECAB3-216ENST00000498353 AFDNP55196 1824 aaKnown RBP23.15■■□□□ 1.3
NECAB3-216ENST00000498353 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
NECAB3-216ENST00000498353 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.29
NECAB3-216ENST00000498353 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.29
NECAB3-216ENST00000498353 BRCA1P38398 1863 aaKnown RBP23.13■■□□□ 1.29
NECAB3-216ENST00000498353 RGL2O15211 777 aa23.13■■□□□ 1.29
NECAB3-216ENST00000498353 SETDB2Q96T68 719 aa23.13■■□□□ 1.29
NECAB3-216ENST00000498353 TSPYL4Q9UJ04 414 aa23.13■■□□□ 1.29
NECAB3-216ENST00000498353 ADCY9O60503 1353 aa23.13■■□□□ 1.29
NECAB3-216ENST00000498353 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
NECAB3-216ENST00000498353 PRR5LQ6MZQ0 368 aa23.11■■□□□ 1.29
NECAB3-216ENST00000498353 ARHGAP27Q6ZUM4 889 aa23.11■■□□□ 1.29
NECAB3-216ENST00000498353 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
NECAB3-216ENST00000498353 ZNF652Q9Y2D9 606 aa23.11■■□□□ 1.29
NECAB3-216ENST00000498353 LAMB4A4D0S4 1761 aa23.1■■□□□ 1.29
NECAB3-216ENST00000498353 ZNF316A6NFI3 1004 aaPredicted RBP23.1■■□□□ 1.29
NECAB3-216ENST00000498353 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
NECAB3-216ENST00000498353 BCORQ6W2J9 1755 aa23.09■■□□□ 1.29
NECAB3-216ENST00000498353 ATP10DQ9P241 1426 aa23.09■■□□□ 1.29
NECAB3-216ENST00000498353 PDZRN3Q9UPQ7 1066 aa23.09■■□□□ 1.29
NECAB3-216ENST00000498353 H0YIN7 160 aa23.08■■□□□ 1.29
NECAB3-216ENST00000498353 C2CD5Q86YS7 1000 aa23.08■■□□□ 1.29
NECAB3-216ENST00000498353 PDE6BP35913 854 aa23.07■■□□□ 1.28
NECAB3-216ENST00000498353 CNBD1Q8NA66 436 aa23.07■■□□□ 1.28
NECAB3-216ENST00000498353 ERBB4Q15303 1308 aa23.07■■□□□ 1.28
NECAB3-216ENST00000498353 ARFGEF1Q9Y6D6 1849 aa23.06■■□□□ 1.28
NECAB3-216ENST00000498353 CHL1O00533 1208 aa23.06■■□□□ 1.28
NECAB3-216ENST00000498353 ERVV-1B6SEH8 477 aa23.05■■□□□ 1.28
NECAB3-216ENST00000498353 HLFQ16534 295 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms