RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
TMEM39A-212ENST00000497993 FBXO41Q8TF61 875 aa8.58□□□□□ -1.04
TMEM39A-212ENST00000497993 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
TMEM39A-212ENST00000497993 ALKQ9UM73 1620 aa8.58□□□□□ -1.04
TMEM39A-212ENST00000497993 SETBP1Q9Y6X0 1596 aa8.57□□□□□ -1.04
TMEM39A-212ENST00000497993 CD2BP2O95400 341 aaKnown RBP8.57□□□□□ -1.04
TMEM39A-212ENST00000497993 SLC19A1P41440 591 aa8.57□□□□□ -1.04
TMEM39A-212ENST00000497993 ARMC2Q8NEN0 867 aa8.57□□□□□ -1.04
TMEM39A-212ENST00000497993 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 CSB-PGBD3P0DP91 1061 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 PTCRAQ6ISU1 281 aaPredicted RBP8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 ANKLE2Q86XL3 938 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 UNC93B1Q9H1C4 597 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 SNRKQ9NRH2 765 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 MAP10Q9P2G4 905 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 XRN1Q8IZH2 1706 aaKnown RBP8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 NUP155O75694 1391 aa8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 NKTRP30414 1462 aaKnown RBP8.56□□□□□ -1.04
TMEM39A-212ENST00000497993 PRAG1Q86YV5 1406 aa8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 IDI1Q13907 227 aa8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 PRM3Q9NNZ6 103 aa8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-212ENST00000497993 PLEKHG1Q9ULL1 1385 aa8.54□□□□□ -1.04
TMEM39A-212ENST00000497993 TRIM32Q13049 653 aa8.54□□□□□ -1.04
TMEM39A-212ENST00000497993 NR6A1Q15406 480 aa8.54□□□□□ -1.04
TMEM39A-212ENST00000497993 MTMR14Q8NCE2 650 aa8.54□□□□□ -1.04
TMEM39A-212ENST00000497993 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-212ENST00000497993 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 SND1Q7KZF4 910 aaKnown RBP eCLIP8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 GPKOWQ92917 476 aaPredicted RBP eCLIP8.53□□□□□ -1.043e-8■■■■■ 71.9
TMEM39A-212ENST00000497993 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 TRIM34Q9BYJ4 488 aa8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 LRRC7Q96NW7 1537 aa8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 ZNF335Q9H4Z2 1342 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-212ENST00000497993 PIK3R4Q99570 1358 aa8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 LTKP29376 864 aa8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 WNT7BP56706 349 aa8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 PPARGC1BQ86YN6 1023 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 GLMNQ92990 594 aa8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 ADAMTS13Q76LX8 1427 aa8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 RIMS2Q9UQ26 1411 aa8.52□□□□□ -1.05
TMEM39A-212ENST00000497993 KNDC1Q76NI1 1749 aa8.51□□□□□ -1.05
TMEM39A-212ENST00000497993 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
TMEM39A-212ENST00000497993 FKBPLQ9UIM3 349 aa8.51□□□□□ -1.05
TMEM39A-212ENST00000497993 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
TMEM39A-212ENST00000497993 BAP1Q92560 729 aa8.5□□□□□ -1.05
TMEM39A-212ENST00000497993 SETD5Q9C0A6 1442 aa8.5□□□□□ -1.05
TMEM39A-212ENST00000497993 NDUFB9Q9Y6M9 179 aa8.5□□□□□ -1.05
TMEM39A-212ENST00000497993 NCOA3Q9Y6Q9 1424 aa8.5□□□□□ -1.05
TMEM39A-212ENST00000497993 LAMC1P11047 1609 aa8.5□□□□□ -1.05
TMEM39A-212ENST00000497993 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
TMEM39A-212ENST00000497993 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
TMEM39A-212ENST00000497993 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
TMEM39A-212ENST00000497993 SPATA31E1Q6ZUB1 1445 aa8.48□□□□□ -1.05
TMEM39A-212ENST00000497993 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
TMEM39A-212ENST00000497993 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
TMEM39A-212ENST00000497993 SH3BP2P78314 561 aa8.47□□□□□ -1.05
TMEM39A-212ENST00000497993 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
TMEM39A-212ENST00000497993 TXNDC2Q86VQ3 553 aa8.47□□□□□ -1.05
TMEM39A-212ENST00000497993 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.47□□□□□ -1.05
TMEM39A-212ENST00000497993 GPSM3Q9Y4H4 160 aa8.47□□□□□ -1.05
TMEM39A-212ENST00000497993 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.46□□□□□ -1.05
TMEM39A-212ENST00000497993 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.05
TMEM39A-212ENST00000497993 ABL2P42684 1182 aa8.46□□□□□ -1.06
TMEM39A-212ENST00000497993 SKOR1P84550 965 aa8.46□□□□□ -1.06
TMEM39A-212ENST00000497993 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
TMEM39A-212ENST00000497993 BPHLQ86WA6 291 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-212ENST00000497993 NALCNQ8IZF0 1738 aa8.46□□□□□ -1.06
TMEM39A-212ENST00000497993 DCCP43146 1447 aa8.46□□□□□ -1.06
TMEM39A-212ENST00000497993 MYOM2P54296 1465 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 WNT7AO00755 349 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 ITGAEP38570 1179 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 PTK2Q05397 1052 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 RAB3GAP2Q9H2M9 1393 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 PTCH1Q13635 1447 aa8.45□□□□□ -1.06
TMEM39A-212ENST00000497993 KIAA1210Q9ULL0 1709 aa8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 KCNA6P17658 529 aa8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 VARSP26640 1264 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 SH3RF1Q7Z6J0 888 aa8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
TMEM39A-212ENST00000497993 AGERQ15109 404 aa8.43□□□□□ -1.06
TMEM39A-212ENST00000497993 TBC1D2BQ9UPU7 963 aa8.43□□□□□ -1.06
TMEM39A-212ENST00000497993 TECPR2O15040 1411 aa8.43□□□□□ -1.06
TMEM39A-212ENST00000497993 PTPRUQ92729 1446 aa8.43□□□□□ -1.06
TMEM39A-212ENST00000497993 ASXL1Q8IXJ9 1541 aa8.43□□□□□ -1.06
TMEM39A-212ENST00000497993 ROBO1Q9Y6N7 1651 aa8.43□□□□□ -1.06
TMEM39A-212ENST00000497993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 RBM47A0AV96 593 aaKnown RBP8.42□□□□□ -1.06
TMEM39A-212ENST00000497993 POM121CA8CG34 1229 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms