RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 RRP7AQ9Y3A4 280 aaKnown RBP25.71■■□□□ 1.71
ACTN4-208ENST00000497637 TMPOP42166 694 aaKnown RBP25.7■■□□□ 1.7
ACTN4-208ENST00000497637 NKX1-1Q15270 411 aaPredicted RBP25.7■■□□□ 1.7
ACTN4-208ENST00000497637 ATP6V1AP38606 617 aa25.69■■□□□ 1.7
ACTN4-208ENST00000497637 DCAF5Q96JK2 942 aa25.69■■□□□ 1.7
ACTN4-208ENST00000497637 SPINK5Q9NQ38 1064 aaPredicted RBP25.69■■□□□ 1.7
ACTN4-208ENST00000497637 RTCBQ9Y3I0 505 aaKnown RBP25.69■■□□□ 1.7
ACTN4-208ENST00000497637 PARP3Q9Y6F1 533 aa25.69■■□□□ 1.7
ACTN4-208ENST00000497637 ZC3H4Q9UPT8 1303 aaKnown RBP25.68■■□□□ 1.7
ACTN4-208ENST00000497637 ADRA2BP18089 450 aa25.68■■□□□ 1.7
ACTN4-208ENST00000497637 RRP1P56182 461 aaKnown RBP25.68■■□□□ 1.7
ACTN4-208ENST00000497637 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
ACTN4-208ENST00000497637 DALRD3Q5D0E6 543 aaKnown RBP25.68■■□□□ 1.7
ACTN4-208ENST00000497637 RGPD2P0DJD1 1756 aa25.67■■□□□ 1.7
ACTN4-208ENST00000497637 KCNA3P22001 575 aa25.67■■□□□ 1.7
ACTN4-208ENST00000497637 ITPK1Q13572 414 aa25.67■■□□□ 1.7
ACTN4-208ENST00000497637 TMOD3Q9NYL9 352 aa25.67■■□□□ 1.7
ACTN4-208ENST00000497637 EIF4A2Q14240 407 aaKnown RBP25.66■■□□□ 1.7
ACTN4-208ENST00000497637 N4BP2Q86UW6 1770 aaPredicted RBP25.66■■□□□ 1.7
ACTN4-208ENST00000497637 KIF24Q5T7B8 1368 aa25.66■■□□□ 1.7
ACTN4-208ENST00000497637 KIAA1551Q9HCM1 1747 aa25.66■■□□□ 1.7
ACTN4-208ENST00000497637 NEFMP07197 916 aa25.65■■□□□ 1.7
ACTN4-208ENST00000497637 VEGFAP15692 232 aaPredicted RBP25.65■■□□□ 1.7
ACTN4-208ENST00000497637 PRKAR2BP31323 418 aa25.65■■□□□ 1.7
ACTN4-208ENST00000497637 PPP4R2Q9NY27 417 aa25.64■■□□□ 1.7
ACTN4-208ENST00000497637 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
ACTN4-208ENST00000497637 ASAP1Q9ULH1 1129 aa25.63■■□□□ 1.69
ACTN4-208ENST00000497637 FLT4P35916 1363 aa25.63■■□□□ 1.69
ACTN4-208ENST00000497637 TNRC6CQ9HCJ0 1690 aaKnown RBP25.62■■□□□ 1.69
ACTN4-208ENST00000497637 RFC4P35249 363 aa25.62■■□□□ 1.69
ACTN4-208ENST00000497637 HSP90AB2PQ58FF8 381 aa25.62■■□□□ 1.69
ACTN4-208ENST00000497637 PCDH10Q9P2E7 1040 aa25.62■■□□□ 1.69
ACTN4-208ENST00000497637 TRIM35Q9UPQ4 493 aa25.62■■□□□ 1.69
ACTN4-208ENST00000497637 HMOX1P09601 288 aa25.61■■□□□ 1.69
ACTN4-208ENST00000497637 RC3H1Q5TC82 1133 aaKnown RBP25.61■■□□□ 1.69
ACTN4-208ENST00000497637 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
ACTN4-208ENST00000497637 IL16Q14005 1332 aa25.61■■□□□ 1.69
ACTN4-208ENST00000497637 GYS1P13807 737 aa25.6■■□□□ 1.69
ACTN4-208ENST00000497637 RIPK4P57078 832 aa25.6■■□□□ 1.69
ACTN4-208ENST00000497637 NFE2L2Q16236 605 aa25.6■■□□□ 1.69
ACTN4-208ENST00000497637 ITGB4P16144 1822 aa25.6■■□□□ 1.69
ACTN4-208ENST00000497637 ARFGEF1Q9Y6D6 1849 aa25.58■■□□□ 1.69
ACTN4-208ENST00000497637 PKD1L3Q7Z443 1732 aa25.58■■□□□ 1.69
ACTN4-208ENST00000497637 MYH16Q9H6N6 1097 aa25.58■■□□□ 1.69
ACTN4-208ENST00000497637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.58■■□□□ 1.69
ACTN4-208ENST00000497637 GLTPD2A6NH11 291 aa25.57■■□□□ 1.68
ACTN4-208ENST00000497637 PHACTR3Q96KR7 559 aa25.57■■□□□ 1.68
ACTN4-208ENST00000497637 BRCA1P38398 1863 aaKnown RBP25.56■■□□□ 1.68
ACTN4-208ENST00000497637 PRDM10Q9NQV6 1147 aa25.56■■□□□ 1.68
ACTN4-208ENST00000497637 ATG3Q9NT62 314 aa25.56■■□□□ 1.68
ACTN4-208ENST00000497637 C4AP0C0L4 1744 aa25.56■■□□□ 1.68
ACTN4-208ENST00000497637 RPS6KA4O75676 772 aa25.55■■□□□ 1.68
ACTN4-208ENST00000497637 LMNB1P20700 586 aa25.53■■□□□ 1.68
ACTN4-208ENST00000497637 SULT6B1Q6IMI4 303 aa25.53■■□□□ 1.68
ACTN4-208ENST00000497637 CNTNAP4Q9C0A0 1308 aa25.53■■□□□ 1.68
ACTN4-208ENST00000497637 IFNL2Q8IZJ0 200 aa25.52■■□□□ 1.68
ACTN4-208ENST00000497637 CREBZFQ9NS37 354 aa25.51■■□□□ 1.67
ACTN4-208ENST00000497637 LMOD3Q0VAK6 560 aa25.5■■□□□ 1.67
ACTN4-208ENST00000497637 AEBP1Q8IUX7 1158 aa25.5■■□□□ 1.67
ACTN4-208ENST00000497637 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.5■■□□□ 1.67
ACTN4-208ENST00000497637 KDM6AO15550 1401 aaPredicted RBP25.49■■□□□ 1.67
ACTN4-208ENST00000497637 KDRP35968 1356 aa25.49■■□□□ 1.67
ACTN4-208ENST00000497637 CALD1Q05682 793 aaKnown RBP25.49■■□□□ 1.67
ACTN4-208ENST00000497637 CT47B1P0C2W7 299 aaPredicted RBP25.48■■□□□ 1.67
ACTN4-208ENST00000497637 PHKG2P15735 406 aa25.47■■□□□ 1.67
ACTN4-208ENST00000497637 CHRNA5P30532 468 aa25.47■■□□□ 1.67
ACTN4-208ENST00000497637 EYA1Q99502 592 aa25.47■■□□□ 1.67
ACTN4-208ENST00000497637 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
ACTN4-208ENST00000497637 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
ACTN4-208ENST00000497637 CTCFP49711 727 aaPredicted RBP25.46■■□□□ 1.67
ACTN4-208ENST00000497637 DPY19L2Q6NUT2 758 aa25.46■■□□□ 1.67
ACTN4-208ENST00000497637 AIDAQ96BJ3 306 aa25.46■■□□□ 1.67
ACTN4-208ENST00000497637 FANCIQ9NVI1 1328 aa25.45■■□□□ 1.66
ACTN4-208ENST00000497637 FOXN1O15353 648 aa25.45■■□□□ 1.66
ACTN4-208ENST00000497637 PLIN1O60240 522 aa25.45■■□□□ 1.66
ACTN4-208ENST00000497637 SLC4A9Q96Q91 983 aa25.45■■□□□ 1.66
ACTN4-208ENST00000497637 SBF1O95248 1867 aa25.45■■□□□ 1.66
ACTN4-208ENST00000497637 ERVV-2B6SEH9 535 aa25.44■■□□□ 1.66
ACTN4-208ENST00000497637 MKRN1Q9UHC7 482 aaKnown RBP25.44■■□□□ 1.66
ACTN4-208ENST00000497637 RASSF7Q02833 373 aa25.43■■□□□ 1.66
ACTN4-208ENST00000497637 DDR1Q08345 913 aa25.43■■□□□ 1.66
ACTN4-208ENST00000497637 EXOC6Q8TAG9 804 aa25.42■■□□□ 1.66
ACTN4-208ENST00000497637 RARSP54136 660 aaKnown RBP25.41■■□□□ 1.66
ACTN4-208ENST00000497637 ZNF831Q5JPB2 1677 aa25.41■■□□□ 1.66
ACTN4-208ENST00000497637 USP42Q9H9J4 1324 aaKnown RBP25.4■■□□□ 1.66
ACTN4-208ENST00000497637 BCAR3O75815 825 aa25.4■■□□□ 1.66
ACTN4-208ENST00000497637 CHADLQ6NUI6 762 aa25.4■■□□□ 1.66
ACTN4-208ENST00000497637 IFT57Q9NWB7 429 aa25.4■■□□□ 1.66
ACTN4-208ENST00000497637 HSP90AB1P08238 724 aaKnown RBP25.39■■□□□ 1.66
ACTN4-208ENST00000497637 ZNF853P0CG23 659 aa25.39■■□□□ 1.66
ACTN4-208ENST00000497637 GNAI1P63096 354 aa25.39■■□□□ 1.66
ACTN4-208ENST00000497637 TSR2Q969E8 191 aaKnown RBP25.39■■□□□ 1.66
ACTN4-208ENST00000497637 POTECB2RU33 542 aa25.38■■□□□ 1.65
ACTN4-208ENST00000497637 POLRMTO00411 1230 aaKnown RBP25.38■■□□□ 1.65
ACTN4-208ENST00000497637 EXOSC9Q06265 439 aaKnown RBP25.38■■□□□ 1.65
ACTN4-208ENST00000497637 FAM161AQ3B820 660 aa25.38■■□□□ 1.65
ACTN4-208ENST00000497637 B4GALNT3Q6L9W6 998 aa25.38■■□□□ 1.65
ACTN4-208ENST00000497637 SRP68Q9UHB9 627 aaKnown RBP25.38■■□□□ 1.65
ACTN4-208ENST00000497637 CNTNAP1P78357 1384 aa25.37■■□□□ 1.65
ACTN4-208ENST00000497637 TM4SF1P30408 202 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms