RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 RARSP54136 660 aaKnown RBP12.78□□□□□ -0.36
C4A-258ENST00000496659 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
C4A-258ENST00000496659 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
C4A-258ENST00000496659 TXNRD1Q16881 649 aa12.77□□□□□ -0.37
C4A-258ENST00000496659 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
C4A-258ENST00000496659 C5P01031 1676 aa12.77□□□□□ -0.37
C4A-258ENST00000496659 STARD3NLO95772 234 aa12.76□□□□□ -0.37
C4A-258ENST00000496659 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
C4A-258ENST00000496659 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
C4A-258ENST00000496659 RGPD3A6NKT7 1758 aaPredicted RBP12.75□□□□□ -0.37
C4A-258ENST00000496659 IPO8O15397 1037 aaKnown RBP12.75□□□□□ -0.37
C4A-258ENST00000496659 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
C4A-258ENST00000496659 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
C4A-258ENST00000496659 SIK1P57059 783 aa12.75□□□□□ -0.37
C4A-258ENST00000496659 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
C4A-258ENST00000496659 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
C4A-258ENST00000496659 TJP1Q07157 1748 aa12.74□□□□□ -0.37
C4A-258ENST00000496659 NEFLP07196 543 aa12.74□□□□□ -0.37
C4A-258ENST00000496659 MS4A1P11836 297 aa12.74□□□□□ -0.37
C4A-258ENST00000496659 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
C4A-258ENST00000496659 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
C4A-258ENST00000496659 LY75O60449 1722 aa12.74□□□□□ -0.37
C4A-258ENST00000496659 PTPRCP08575 1304 aa12.73□□□□□ -0.37
C4A-258ENST00000496659 SLC27A3Q5K4L6 730 aa12.73□□□□□ -0.37
C4A-258ENST00000496659 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
C4A-258ENST00000496659 BCL2L13Q9BXK5 485 aa12.73□□□□□ -0.37
C4A-258ENST00000496659 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
C4A-258ENST00000496659 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
C4A-258ENST00000496659 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
C4A-258ENST00000496659 BCAR3O75815 825 aa12.72□□□□□ -0.37
C4A-258ENST00000496659 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
C4A-258ENST00000496659 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
C4A-258ENST00000496659 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
C4A-258ENST00000496659 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
C4A-258ENST00000496659 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
C4A-258ENST00000496659 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
C4A-258ENST00000496659 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
C4A-258ENST00000496659 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
C4A-258ENST00000496659 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
C4A-258ENST00000496659 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
C4A-258ENST00000496659 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
C4A-258ENST00000496659 DDX58O95786 925 aaKnown RBP12.71□□□□□ -0.37
C4A-258ENST00000496659 SLC15A2Q16348 729 aa12.71□□□□□ -0.37
C4A-258ENST00000496659 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
C4A-258ENST00000496659 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.37
C4A-258ENST00000496659 LRRC4BQ9NT99 713 aa12.71□□□□□ -0.37
C4A-258ENST00000496659 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
C4A-258ENST00000496659 CASZ1Q86V15 1759 aa12.71□□□□□ -0.38
C4A-258ENST00000496659 RNF123Q5XPI4 1314 aa12.7□□□□□ -0.38
C4A-258ENST00000496659 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
C4A-258ENST00000496659 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
C4A-258ENST00000496659 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
C4A-258ENST00000496659 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
C4A-258ENST00000496659 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
C4A-258ENST00000496659 COL5A3P25940 1745 aaPredicted RBP12.7□□□□□ -0.38
C4A-258ENST00000496659 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
C4A-258ENST00000496659 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
C4A-258ENST00000496659 KCNQ4P56696 695 aa12.69□□□□□ -0.38
C4A-258ENST00000496659 FLIIQ13045 1269 aa12.69□□□□□ -0.38
C4A-258ENST00000496659 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
C4A-258ENST00000496659 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
C4A-258ENST00000496659 NOB1Q9ULX3 412 aaKnown RBP12.69□□□□□ -0.38
C4A-258ENST00000496659 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 MYL6BP14649 208 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 PTGER2P43116 358 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
C4A-258ENST00000496659 ITPK1Q13572 414 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 PDE3AQ14432 1141 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 ZNF827Q17R98 1081 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
C4A-258ENST00000496659 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
C4A-258ENST00000496659 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
C4A-258ENST00000496659 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
C4A-258ENST00000496659 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
C4A-258ENST00000496659 C4BP0C0L5 1744 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 A0A087WZG4 1122 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 A1BGP04217 495 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 TRIM27P14373 513 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 PDIA6Q15084 440 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
C4A-258ENST00000496659 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
C4A-258ENST00000496659 AK7Q96M32 723 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 CHMP4BQ9H444 224 aaKnown RBP12.66□□□□□ -0.38
C4A-258ENST00000496659 ZBTB1Q9Y2K1 713 aa12.66□□□□□ -0.38
C4A-258ENST00000496659 PLIN1O60240 522 aa12.65□□□□□ -0.38
C4A-258ENST00000496659 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
C4A-258ENST00000496659 LINC00116Q8NCU8 138 aa12.65□□□□□ -0.38
C4A-258ENST00000496659 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
C4A-258ENST00000496659 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
C4A-258ENST00000496659 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
C4A-258ENST00000496659 PHAXQ9H814 394 aaKnown RBP12.65□□□□□ -0.38
C4A-258ENST00000496659 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
C4A-258ENST00000496659 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.39
C4A-258ENST00000496659 ABCC4O15439 1325 aa12.64□□□□□ -0.39
C4A-258ENST00000496659 NBPF26B4DH59 902 aa12.64□□□□□ -0.39
C4A-258ENST00000496659 ANXA1P04083 346 aa12.64□□□□□ -0.39
C4A-258ENST00000496659 NEXNQ0ZGT2 675 aa12.64□□□□□ -0.39
C4A-258ENST00000496659 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
C4A-258ENST00000496659 NBPF10Q6P3W6 841 aaKnown RBP12.64□□□□□ -0.39
C4A-258ENST00000496659 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms