RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
HDLBP-246ENST00000496569 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
HDLBP-246ENST00000496569 COL15A1P39059 1388 aa16.25■□□□□ 0.19
HDLBP-246ENST00000496569 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
HDLBP-246ENST00000496569 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
HDLBP-246ENST00000496569 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
HDLBP-246ENST00000496569 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
HDLBP-246ENST00000496569 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
HDLBP-246ENST00000496569 C10orf71Q711Q0 1435 aa16.23■□□□□ 0.19
HDLBP-246ENST00000496569 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
HDLBP-246ENST00000496569 DDR1Q08345 913 aa16.23■□□□□ 0.19
HDLBP-246ENST00000496569 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
HDLBP-246ENST00000496569 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
HDLBP-246ENST00000496569 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
HDLBP-246ENST00000496569 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
HDLBP-246ENST00000496569 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
HDLBP-246ENST00000496569 ZNF330Q9Y3S2 320 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-246ENST00000496569 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
HDLBP-246ENST00000496569 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.19
HDLBP-246ENST00000496569 VSIG10Q8N0Z9 540 aa16.21■□□□□ 0.19
HDLBP-246ENST00000496569 NLGN1Q8N2Q7 840 aa16.21■□□□□ 0.19
HDLBP-246ENST00000496569 FMNL2Q96PY5 1086 aa16.21■□□□□ 0.19
HDLBP-246ENST00000496569 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
HDLBP-246ENST00000496569 A1BGP04217 495 aa16.2■□□□□ 0.18
HDLBP-246ENST00000496569 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
HDLBP-246ENST00000496569 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
HDLBP-246ENST00000496569 NEFMP07197 916 aa16.19■□□□□ 0.18
HDLBP-246ENST00000496569 PRKRIP1Q9H875 184 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-246ENST00000496569 RRP7AQ9Y3A4 280 aaKnown RBP16.19■□□□□ 0.18
HDLBP-246ENST00000496569 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
HDLBP-246ENST00000496569 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
HDLBP-246ENST00000496569 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
HDLBP-246ENST00000496569 ZPR1O75312 459 aa16.18■□□□□ 0.18
HDLBP-246ENST00000496569 STARD3NLO95772 234 aa16.18■□□□□ 0.18
HDLBP-246ENST00000496569 CACNA1SQ13698 1873 aa16.17■□□□□ 0.18
HDLBP-246ENST00000496569 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
HDLBP-246ENST00000496569 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
HDLBP-246ENST00000496569 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
HDLBP-246ENST00000496569 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
HDLBP-246ENST00000496569 EIF5P55010 431 aaKnown RBP16.17■□□□□ 0.18
HDLBP-246ENST00000496569 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
HDLBP-246ENST00000496569 NFIXQ14938 502 aa16.16■□□□□ 0.18
HDLBP-246ENST00000496569 TAF7Q15545 349 aaPredicted RBP16.16■□□□□ 0.18
HDLBP-246ENST00000496569 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
HDLBP-246ENST00000496569 TBC1D2BQ9UPU7 963 aa16.16■□□□□ 0.18
HDLBP-246ENST00000496569 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
HDLBP-246ENST00000496569 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
HDLBP-246ENST00000496569 DPEP1P16444 411 aa16.15■□□□□ 0.18
HDLBP-246ENST00000496569 TM4SF1P30408 202 aa16.15■□□□□ 0.18
HDLBP-246ENST00000496569 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
HDLBP-246ENST00000496569 COL11A2P13942 1736 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-246ENST00000496569 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
HDLBP-246ENST00000496569 RIPK4P57078 832 aa16.14■□□□□ 0.17
HDLBP-246ENST00000496569 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
HDLBP-246ENST00000496569 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
HDLBP-246ENST00000496569 CHRNA5P30532 468 aa16.13■□□□□ 0.17
HDLBP-246ENST00000496569 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDLBP-246ENST00000496569 CCDC24Q8N4L8 307 aa16.13■□□□□ 0.17
HDLBP-246ENST00000496569 ZNF784Q8NCA9 323 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-246ENST00000496569 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-246ENST00000496569 ADAMTS8Q9UP79 889 aa16.13■□□□□ 0.17
HDLBP-246ENST00000496569 NUP98P52948 1817 aa16.12■□□□□ 0.17
HDLBP-246ENST00000496569 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
HDLBP-246ENST00000496569 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
HDLBP-246ENST00000496569 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-246ENST00000496569 TBC1D9BQ66K14 1250 aa16.12■□□□□ 0.17
HDLBP-246ENST00000496569 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
HDLBP-246ENST00000496569 NBPF15Q8N660 670 aa16.12■□□□□ 0.17
HDLBP-246ENST00000496569 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
HDLBP-246ENST00000496569 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
HDLBP-246ENST00000496569 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
HDLBP-246ENST00000496569 KCNA3P22001 575 aa16.11■□□□□ 0.17
HDLBP-246ENST00000496569 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
HDLBP-246ENST00000496569 BCS1LQ9Y276 419 aa16.11■□□□□ 0.17
HDLBP-246ENST00000496569 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-246ENST00000496569 SERPINB2P05120 415 aa16.1■□□□□ 0.17
HDLBP-246ENST00000496569 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
HDLBP-246ENST00000496569 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
HDLBP-246ENST00000496569 A0A087WZG4 1122 aa16.09■□□□□ 0.17
HDLBP-246ENST00000496569 TGFB2P61812 414 aa16.09■□□□□ 0.17
HDLBP-246ENST00000496569 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
HDLBP-246ENST00000496569 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
HDLBP-246ENST00000496569 CCDC88AQ3V6T2 1871 aa16.09■□□□□ 0.17
HDLBP-246ENST00000496569 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-246ENST00000496569 RUNDC1Q96C34 613 aa16.08■□□□□ 0.16
HDLBP-246ENST00000496569 TRIM35Q9UPQ4 493 aa16.08■□□□□ 0.16
HDLBP-246ENST00000496569 SBF1O95248 1867 aa16.08■□□□□ 0.16
HDLBP-246ENST00000496569 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
HDLBP-246ENST00000496569 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
HDLBP-246ENST00000496569 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
HDLBP-246ENST00000496569 ANXA1P04083 346 aa16.05■□□□□ 0.16
HDLBP-246ENST00000496569 MYL6BP14649 208 aa16.05■□□□□ 0.16
HDLBP-246ENST00000496569 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
HDLBP-246ENST00000496569 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
HDLBP-246ENST00000496569 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
HDLBP-246ENST00000496569 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
HDLBP-246ENST00000496569 ADCY9O60503 1353 aa16.04■□□□□ 0.16
HDLBP-246ENST00000496569 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
HDLBP-246ENST00000496569 HLFQ16534 295 aa16.04■□□□□ 0.16
HDLBP-246ENST00000496569 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms