RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 MS4A1P11836 297 aa11.84□□□□□ -0.51
ABCA1-204ENST00000494467 PDIA6Q15084 440 aa11.84□□□□□ -0.51
ABCA1-204ENST00000494467 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
ABCA1-204ENST00000494467 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
ABCA1-204ENST00000494467 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
ABCA1-204ENST00000494467 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
ABCA1-204ENST00000494467 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 EP400Q96L91 3159 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 SIK1P57059 783 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
ABCA1-204ENST00000494467 RGL2O15211 777 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 STARD3NLO95772 234 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 CYP19A1P11511 503 aaPredicted RBP11.82□□□□□ -0.52
ABCA1-204ENST00000494467 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
ABCA1-204ENST00000494467 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 ATF7IPQ6VMQ6 1270 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
ABCA1-204ENST00000494467 ABCC4O15439 1325 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
ABCA1-204ENST00000494467 UBR3Q6ZT12 1888 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 QSER1Q2KHR3 1735 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
ABCA1-204ENST00000494467 AAMPQ13685 434 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 FAM182BQ5T319 152 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 API5Q9BZZ5 524 aaKnown RBP11.81□□□□□ -0.52
ABCA1-204ENST00000494467 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
ABCA1-204ENST00000494467 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 ANKRD36CQ5JPF3 1778 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 TRIM27P14373 513 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
ABCA1-204ENST00000494467 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
ABCA1-204ENST00000494467 NUP98P52948 1817 aa11.8□□□□□ -0.52
ABCA1-204ENST00000494467 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
ABCA1-204ENST00000494467 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
ABCA1-204ENST00000494467 FLIIQ13045 1269 aa11.79□□□□□ -0.52
ABCA1-204ENST00000494467 ITPK1Q13572 414 aa11.79□□□□□ -0.52
ABCA1-204ENST00000494467 TRIM37O94972 964 aa11.78□□□□□ -0.52
ABCA1-204ENST00000494467 EIF2S2P20042 333 aaKnown RBP11.78□□□□□ -0.52
ABCA1-204ENST00000494467 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
ABCA1-204ENST00000494467 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
ABCA1-204ENST00000494467 INTS3Q68E01 1043 aaKnown RBP11.78□□□□□ -0.52
ABCA1-204ENST00000494467 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
ABCA1-204ENST00000494467 G2E3Q7L622 706 aa11.78□□□□□ -0.52
ABCA1-204ENST00000494467 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
ABCA1-204ENST00000494467 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
ABCA1-204ENST00000494467 BCL2L13Q9BXK5 485 aa11.78□□□□□ -0.52
ABCA1-204ENST00000494467 EIF5P55010 431 aaKnown RBP11.77□□□□□ -0.53
ABCA1-204ENST00000494467 PROSER3Q2NL68 480 aa11.77□□□□□ -0.53
ABCA1-204ENST00000494467 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
ABCA1-204ENST00000494467 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
ABCA1-204ENST00000494467 ADCY9O60503 1353 aa11.77□□□□□ -0.53
ABCA1-204ENST00000494467 SCN7AQ01118 1682 aa11.76□□□□□ -0.53
ABCA1-204ENST00000494467 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
ABCA1-204ENST00000494467 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
ABCA1-204ENST00000494467 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
ABCA1-204ENST00000494467 TUBGCP6Q96RT7 1819 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 PLIN1O60240 522 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
ABCA1-204ENST00000494467 A1BGP04217 495 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 RLBP1P12271 317 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
ABCA1-204ENST00000494467 PROM2Q8N271 834 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 PLBD2Q8NHP8 589 aa11.75□□□□□ -0.53
ABCA1-204ENST00000494467 PHAXQ9H814 394 aaKnown RBP11.75□□□□□ -0.53
ABCA1-204ENST00000494467 CCNL1Q9UK58 526 aaPredicted RBP11.75□□□□□ -0.53
ABCA1-204ENST00000494467 ERVV-1B6SEH8 477 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
ABCA1-204ENST00000494467 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
ABCA1-204ENST00000494467 MVPQ14764 893 aaKnown RBP11.74□□□□□ -0.53
ABCA1-204ENST00000494467 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 C20orf194Q5TEA3 1177 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
ABCA1-204ENST00000494467 CHMP4BQ9H444 224 aaKnown RBP11.74□□□□□ -0.53
ABCA1-204ENST00000494467 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
ABCA1-204ENST00000494467 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 NEFLP07196 543 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 ADRA2BP18089 450 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 TRIM28Q13263 835 aaKnown RBP11.73□□□□□ -0.53
ABCA1-204ENST00000494467 FKBP5Q13451 457 aaPredicted RBP11.73□□□□□ -0.53
ABCA1-204ENST00000494467 XAGE3Q8WTP9 111 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 DNAAF4Q8WXU2 420 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
ABCA1-204ENST00000494467 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms