RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-212ENST00000493940 VSIG10Q8N0Z9 540 aa16.84■□□□□ 0.29
HSPG2-212ENST00000493940 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
HSPG2-212ENST00000493940 USP42Q9H9J4 1324 aaKnown RBP16.84■□□□□ 0.29
HSPG2-212ENST00000493940 DDR1Q08345 913 aa16.83■□□□□ 0.28
HSPG2-212ENST00000493940 KDM3BQ7LBC6 1761 aa16.83■□□□□ 0.28
HSPG2-212ENST00000493940 NLGN1Q8N2Q7 840 aa16.83■□□□□ 0.28
HSPG2-212ENST00000493940 HEG1Q9ULI3 1381 aa16.83■□□□□ 0.28
HSPG2-212ENST00000493940 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
HSPG2-212ENST00000493940 A1BGP04217 495 aa16.82■□□□□ 0.28
HSPG2-212ENST00000493940 CANXP27824 592 aaKnown RBP16.82■□□□□ 0.28
HSPG2-212ENST00000493940 TM4SF1P30408 202 aa16.82■□□□□ 0.28
HSPG2-212ENST00000493940 USPL1Q5W0Q7 1092 aa16.82■□□□□ 0.28
HSPG2-212ENST00000493940 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
HSPG2-212ENST00000493940 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
HSPG2-212ENST00000493940 NRXN2Q9P2S2 1712 aa16.81■□□□□ 0.28
HSPG2-212ENST00000493940 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
HSPG2-212ENST00000493940 COL15A1P39059 1388 aa16.8■□□□□ 0.28
HSPG2-212ENST00000493940 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-212ENST00000493940 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
HSPG2-212ENST00000493940 RALBP1Q15311 655 aa16.8■□□□□ 0.28
HSPG2-212ENST00000493940 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
HSPG2-212ENST00000493940 THUMPD2Q9BTF0 503 aaKnown RBP16.8■□□□□ 0.28
HSPG2-212ENST00000493940 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
HSPG2-212ENST00000493940 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
HSPG2-212ENST00000493940 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
HSPG2-212ENST00000493940 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
HSPG2-212ENST00000493940 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
HSPG2-212ENST00000493940 KCNA3P22001 575 aa16.78■□□□□ 0.28
HSPG2-212ENST00000493940 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
HSPG2-212ENST00000493940 FMNL2Q96PY5 1086 aa16.78■□□□□ 0.28
HSPG2-212ENST00000493940 NARFQ9UHQ1 456 aa16.78■□□□□ 0.28
HSPG2-212ENST00000493940 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.28
HSPG2-212ENST00000493940 BCORQ6W2J9 1755 aa16.77■□□□□ 0.28
HSPG2-212ENST00000493940 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
HSPG2-212ENST00000493940 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
HSPG2-212ENST00000493940 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
HSPG2-212ENST00000493940 SCN7AQ01118 1682 aa16.77■□□□□ 0.28
HSPG2-212ENST00000493940 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
HSPG2-212ENST00000493940 DPEP1P16444 411 aa16.76■□□□□ 0.27
HSPG2-212ENST00000493940 NFIXQ14938 502 aa16.76■□□□□ 0.27
HSPG2-212ENST00000493940 LAMB4A4D0S4 1761 aa16.75■□□□□ 0.27
HSPG2-212ENST00000493940 ZPR1O75312 459 aa16.75■□□□□ 0.27
HSPG2-212ENST00000493940 STARD3NLO95772 234 aa16.75■□□□□ 0.27
HSPG2-212ENST00000493940 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-212ENST00000493940 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-212ENST00000493940 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
HSPG2-212ENST00000493940 SBF1O95248 1867 aa16.74■□□□□ 0.27
HSPG2-212ENST00000493940 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 TGFB2P61812 414 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
HSPG2-212ENST00000493940 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 NBPF15Q8N660 670 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
HSPG2-212ENST00000493940 DLEC1Q9Y238 1755 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 NUP98P52948 1817 aa16.73■□□□□ 0.27
HSPG2-212ENST00000493940 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
HSPG2-212ENST00000493940 CHRNA5P30532 468 aa16.72■□□□□ 0.27
HSPG2-212ENST00000493940 IFFO2Q5TF58 517 aa16.72■□□□□ 0.27
HSPG2-212ENST00000493940 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
HSPG2-212ENST00000493940 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
HSPG2-212ENST00000493940 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
HSPG2-212ENST00000493940 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
HSPG2-212ENST00000493940 IL6STP40189 918 aaPredicted RBP16.71■□□□□ 0.27
HSPG2-212ENST00000493940 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
HSPG2-212ENST00000493940 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
HSPG2-212ENST00000493940 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
HSPG2-212ENST00000493940 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
HSPG2-212ENST00000493940 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
HSPG2-212ENST00000493940 CARMIL3Q8ND23 1372 aa16.71■□□□□ 0.27
HSPG2-212ENST00000493940 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
HSPG2-212ENST00000493940 SERPINB2P05120 415 aa16.7■□□□□ 0.26
HSPG2-212ENST00000493940 RIPK4P57078 832 aa16.7■□□□□ 0.26
HSPG2-212ENST00000493940 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
HSPG2-212ENST00000493940 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
HSPG2-212ENST00000493940 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-212ENST00000493940 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-212ENST00000493940 ADCY9O60503 1353 aa16.69■□□□□ 0.26
HSPG2-212ENST00000493940 BCS1LQ9Y276 419 aa16.69■□□□□ 0.26
HSPG2-212ENST00000493940 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
HSPG2-212ENST00000493940 NEFMP07197 916 aa16.67■□□□□ 0.26
HSPG2-212ENST00000493940 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
HSPG2-212ENST00000493940 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
HSPG2-212ENST00000493940 A0A087WZG4 1122 aa16.66■□□□□ 0.26
HSPG2-212ENST00000493940 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
HSPG2-212ENST00000493940 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
HSPG2-212ENST00000493940 HLFQ16534 295 aa16.65■□□□□ 0.26
HSPG2-212ENST00000493940 SLX4Q8IY92 1834 aa16.65■□□□□ 0.26
HSPG2-212ENST00000493940 HSPA6P17066 643 aa16.64■□□□□ 0.25
HSPG2-212ENST00000493940 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
HSPG2-212ENST00000493940 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
HSPG2-212ENST00000493940 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-212ENST00000493940 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
HSPG2-212ENST00000493940 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
HSPG2-212ENST00000493940 PNISRQ8TF01 805 aaKnown RBP16.63■□□□□ 0.25
HSPG2-212ENST00000493940 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
HSPG2-212ENST00000493940 TTLL7Q6ZT98 887 aa16.62■□□□□ 0.25
HSPG2-212ENST00000493940 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
HSPG2-212ENST00000493940 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms