RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TMPOP42166 694 aaKnown RBP9.19□□□□□ -0.94
TOP3A-207ENST00000493648 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
TOP3A-207ENST00000493648 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
TOP3A-207ENST00000493648 U3KPZ7 1027 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-207ENST00000493648 HEG1Q9ULI3 1381 aa9.19□□□□□ -0.94
TOP3A-207ENST00000493648 MYH14Q7Z406 1995 aaKnown RBP9.19□□□□□ -0.94
TOP3A-207ENST00000493648 KCNQ3O43525 872 aa9.18□□□□□ -0.94
TOP3A-207ENST00000493648 SIPA1L3O60292 1781 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-207ENST00000493648 ZPR1O75312 459 aa9.18□□□□□ -0.94
TOP3A-207ENST00000493648 COL24A1Q17RW2 1714 aa9.18□□□□□ -0.94
TOP3A-207ENST00000493648 KCPQ6ZWJ8 1503 aa9.18□□□□□ -0.94
TOP3A-207ENST00000493648 NPM2Q86SE8 214 aaKnown RBP9.18□□□□□ -0.94
TOP3A-207ENST00000493648 CCDC146Q8IYE0 955 aa9.18□□□□□ -0.94
TOP3A-207ENST00000493648 DLG5Q8TDM6 1919 aa9.18□□□□□ -0.94
TOP3A-207ENST00000493648 TJP1Q07157 1748 aa9.17□□□□□ -0.94
TOP3A-207ENST00000493648 A0A087WZG4 1122 aa9.17□□□□□ -0.94
TOP3A-207ENST00000493648 SNRPA1P09661 255 aaKnown RBP9.17□□□□□ -0.94
TOP3A-207ENST00000493648 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
TOP3A-207ENST00000493648 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
TOP3A-207ENST00000493648 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
TOP3A-207ENST00000493648 UBR2Q8IWV8 1755 aa9.17□□□□□ -0.94
TOP3A-207ENST00000493648 CICQ96RK0 1608 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-207ENST00000493648 MMP10P09238 476 aa9.16□□□□□ -0.94
TOP3A-207ENST00000493648 GYS1P13807 737 aa9.16□□□□□ -0.94
TOP3A-207ENST00000493648 DSG3P32926 999 aa9.16□□□□□ -0.94
TOP3A-207ENST00000493648 THUMPD2Q9BTF0 503 aaKnown RBP9.16□□□□□ -0.94
TOP3A-207ENST00000493648 ZBTB1Q9Y2K1 713 aa9.16□□□□□ -0.94
TOP3A-207ENST00000493648 RRP7AQ9Y3A4 280 aaKnown RBP9.16□□□□□ -0.94
TOP3A-207ENST00000493648 CD2APQ9Y5K6 639 aa9.16□□□□□ -0.94
TOP3A-207ENST00000493648 SOS1Q07889 1333 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-207ENST00000493648 USP42Q9H9J4 1324 aaKnown RBP9.15□□□□□ -0.94
TOP3A-207ENST00000493648 IL6STP40189 918 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-207ENST00000493648 USPL1Q5W0Q7 1092 aa9.15□□□□□ -0.94
TOP3A-207ENST00000493648 BABAM1Q9NWV8 329 aa9.15□□□□□ -0.94
TOP3A-207ENST00000493648 SRP68Q9UHB9 627 aaKnown RBP9.15□□□□□ -0.94
TOP3A-207ENST00000493648 NARFQ9UHQ1 456 aa9.15□□□□□ -0.94
TOP3A-207ENST00000493648 USP16Q9Y5T5 823 aa9.15□□□□□ -0.94
TOP3A-207ENST00000493648 PARP3Q9Y6F1 533 aa9.15□□□□□ -0.94
TOP3A-207ENST00000493648 SRCAPQ6ZRS2 3230 aa9.15□□□□□ -0.94
TOP3A-207ENST00000493648 A1BGP04217 495 aa9.14□□□□□ -0.95
TOP3A-207ENST00000493648 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
TOP3A-207ENST00000493648 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
TOP3A-207ENST00000493648 TSPYL4Q9UJ04 414 aa9.14□□□□□ -0.95
TOP3A-207ENST00000493648 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-207ENST00000493648 COL15A1P39059 1388 aa9.13□□□□□ -0.95
TOP3A-207ENST00000493648 APAF1O14727 1248 aa9.13□□□□□ -0.95
TOP3A-207ENST00000493648 EIF4A1P60842 406 aaKnown RBP9.13□□□□□ -0.95
TOP3A-207ENST00000493648 FKBP8Q14318 412 aa9.13□□□□□ -0.95
TOP3A-207ENST00000493648 GPR162Q16538 588 aa9.13□□□□□ -0.95
TOP3A-207ENST00000493648 CCDC184Q52MB2 194 aa9.13□□□□□ -0.95
TOP3A-207ENST00000493648 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
TOP3A-207ENST00000493648 PRAMEF22A3QJZ6 481 aa9.12□□□□□ -0.95
TOP3A-207ENST00000493648 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-207ENST00000493648 TM4SF1P30408 202 aa9.12□□□□□ -0.95
TOP3A-207ENST00000493648 CALD1Q05682 793 aaKnown RBP9.12□□□□□ -0.95
TOP3A-207ENST00000493648 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
TOP3A-207ENST00000493648 NLGN2Q8NFZ4 835 aa9.12□□□□□ -0.95
TOP3A-207ENST00000493648 SPINK5Q9NQ38 1064 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-207ENST00000493648 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
TOP3A-207ENST00000493648 LAS1LQ9Y4W2 734 aaKnown RBP9.12□□□□□ -0.95
TOP3A-207ENST00000493648 C4AP0C0L4 1744 aa9.11□□□□□ -0.95
TOP3A-207ENST00000493648 CHL1O00533 1208 aa9.11□□□□□ -0.95
TOP3A-207ENST00000493648 TGFB2P61812 414 aa9.11□□□□□ -0.95
TOP3A-207ENST00000493648 DZIP3Q86Y13 1208 aaKnown RBP9.11□□□□□ -0.95
TOP3A-207ENST00000493648 KDM3BQ7LBC6 1761 aa9.1□□□□□ -0.95
TOP3A-207ENST00000493648 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
TOP3A-207ENST00000493648 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-207ENST00000493648 NFIXQ14938 502 aa9.1□□□□□ -0.95
TOP3A-207ENST00000493648 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
TOP3A-207ENST00000493648 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
TOP3A-207ENST00000493648 NBPF26B4DH59 902 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 POLRMTO00411 1230 aaKnown RBP9.09□□□□□ -0.95
TOP3A-207ENST00000493648 SERPINB2P05120 415 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 EIF2S2P20042 333 aaKnown RBP9.09□□□□□ -0.95
TOP3A-207ENST00000493648 GNAI1P63096 354 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 DDR1Q08345 913 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 NBPF10Q6P3W6 841 aaKnown RBP9.09□□□□□ -0.95
TOP3A-207ENST00000493648 CLEC4GQ6UXB4 293 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 NGEFQ8N5V2 710 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 NBPF15Q8N660 670 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 SETDB2Q96T68 719 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 ZNF652Q9Y2D9 606 aa9.09□□□□□ -0.95
TOP3A-207ENST00000493648 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 A0A0G2JLW4 131 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 RGL2O15211 777 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 CAPN15O75808 1086 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 MYL6BP14649 208 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 TBC1D9BQ66K14 1250 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 IFT57Q9NWB7 429 aa9.08□□□□□ -0.96
TOP3A-207ENST00000493648 NPHP1O15259 732 aa9.07□□□□□ -0.96
TOP3A-207ENST00000493648 YY1P25490 414 aa9.07□□□□□ -0.96
TOP3A-207ENST00000493648 CCDC27Q2M243 656 aa9.07□□□□□ -0.96
TOP3A-207ENST00000493648 KIF6Q6ZMV9 814 aa9.07□□□□□ -0.96
TOP3A-207ENST00000493648 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
TOP3A-207ENST00000493648 LAMB4A4D0S4 1761 aa9.07□□□□□ -0.96
TOP3A-207ENST00000493648 C10orf71Q711Q0 1435 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 KIF13BQ9NQT8 1826 aa9.06□□□□□ -0.96
TOP3A-207ENST00000493648 ERVV-1B6SEH8 477 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms