RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
NFIA-213ENST00000493627 ZPR1O75312 459 aa12.27□□□□□ -0.45
NFIA-213ENST00000493627 FCHSD2O94868 740 aa12.27□□□□□ -0.45
NFIA-213ENST00000493627 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
NFIA-213ENST00000493627 USPL1Q5W0Q7 1092 aa12.27□□□□□ -0.45
NFIA-213ENST00000493627 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
NFIA-213ENST00000493627 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.45
NFIA-213ENST00000493627 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
NFIA-213ENST00000493627 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
NFIA-213ENST00000493627 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 GNAT3A8MTJ3 354 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 KCNA3P22001 575 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 TEFQ10587 303 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
NFIA-213ENST00000493627 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
NFIA-213ENST00000493627 TM4SF1P30408 202 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 CHRNA5P30532 468 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 NFIXQ14938 502 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 IL17REQ8NFR9 667 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 PIM2Q9P1W9 311 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
NFIA-213ENST00000493627 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 STARD3NLO95772 234 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
NFIA-213ENST00000493627 PRKAR2BP31323 418 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
NFIA-213ENST00000493627 ZNF790Q6PG37 636 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 ZNF496Q96IT1 587 aaPredicted RBP12.23□□□□□ -0.45
NFIA-213ENST00000493627 BCL2L12Q9HB09 334 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
NFIA-213ENST00000493627 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
NFIA-213ENST00000493627 KIF3CO14782 793 aa12.22□□□□□ -0.45
NFIA-213ENST00000493627 PPP2R1AP30153 589 aa12.21□□□□□ -0.45
NFIA-213ENST00000493627 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.45
NFIA-213ENST00000493627 PHACTR3Q96KR7 559 aa12.21□□□□□ -0.45
NFIA-213ENST00000493627 FMNL2Q96PY5 1086 aa12.21□□□□□ -0.45
NFIA-213ENST00000493627 NUDCQ9Y266 331 aa12.21□□□□□ -0.45
NFIA-213ENST00000493627 AFDNP55196 1824 aaKnown RBP12.21□□□□□ -0.46
NFIA-213ENST00000493627 CARMIL3Q8ND23 1372 aa12.2□□□□□ -0.46
NFIA-213ENST00000493627 A0A087WZG4 1122 aa12.2□□□□□ -0.46
NFIA-213ENST00000493627 SERPINB2P05120 415 aa12.2□□□□□ -0.46
NFIA-213ENST00000493627 HSPA6P17066 643 aa12.2□□□□□ -0.46
NFIA-213ENST00000493627 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
NFIA-213ENST00000493627 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
NFIA-213ENST00000493627 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
NFIA-213ENST00000493627 U2AF1L5P0DN76 240 aaPredicted RBP12.19□□□□□ -0.46
NFIA-213ENST00000493627 U2AF1Q01081 240 aaKnown RBP eCLIP12.19□□□□□ -0.46
NFIA-213ENST00000493627 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
NFIA-213ENST00000493627 DLEC1Q9Y238 1755 aa12.18□□□□□ -0.46
NFIA-213ENST00000493627 KCNQ3O43525 872 aa12.18□□□□□ -0.46
NFIA-213ENST00000493627 IL6STP40189 918 aaPredicted RBP12.18□□□□□ -0.46
NFIA-213ENST00000493627 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
NFIA-213ENST00000493627 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
NFIA-213ENST00000493627 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
NFIA-213ENST00000493627 TBC1D9BQ66K14 1250 aa12.17□□□□□ -0.46
NFIA-213ENST00000493627 C2CD5Q86YS7 1000 aa12.17□□□□□ -0.46
NFIA-213ENST00000493627 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
NFIA-213ENST00000493627 TOMM70O94826 608 aa12.16□□□□□ -0.46
NFIA-213ENST00000493627 A1BGP04217 495 aa12.16□□□□□ -0.46
NFIA-213ENST00000493627 RASSF7Q02833 373 aa12.16□□□□□ -0.46
NFIA-213ENST00000493627 MCM10Q7L590 875 aa12.16□□□□□ -0.46
NFIA-213ENST00000493627 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
NFIA-213ENST00000493627 TBC1D2BQ9UPU7 963 aa12.16□□□□□ -0.46
NFIA-213ENST00000493627 BCORQ6W2J9 1755 aa12.15□□□□□ -0.46
NFIA-213ENST00000493627 H0YIN7 160 aa12.15□□□□□ -0.46
NFIA-213ENST00000493627 CAMTA2O94983 1202 aa12.15□□□□□ -0.46
NFIA-213ENST00000493627 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
NFIA-213ENST00000493627 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
NFIA-213ENST00000493627 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
NFIA-213ENST00000493627 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
NFIA-213ENST00000493627 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
NFIA-213ENST00000493627 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
NFIA-213ENST00000493627 ANKRD31Q8N7Z5 1873 aa12.14□□□□□ -0.47
NFIA-213ENST00000493627 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
NFIA-213ENST00000493627 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
NFIA-213ENST00000493627 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
NFIA-213ENST00000493627 LMNB1P20700 586 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
NFIA-213ENST00000493627 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
NFIA-213ENST00000493627 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
NFIA-213ENST00000493627 NFKBIEO00221 500 aa12.12□□□□□ -0.47
NFIA-213ENST00000493627 NPHP1O15259 732 aa12.12□□□□□ -0.47
NFIA-213ENST00000493627 PDE6BP35913 854 aa12.12□□□□□ -0.47
NFIA-213ENST00000493627 APLP1P51693 650 aa12.12□□□□□ -0.47
NFIA-213ENST00000493627 PRELPP51888 382 aa12.12□□□□□ -0.47
NFIA-213ENST00000493627 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
NFIA-213ENST00000493627 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
NFIA-213ENST00000493627 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
NFIA-213ENST00000493627 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
NFIA-213ENST00000493627 SBF1O95248 1867 aa12.11□□□□□ -0.47
NFIA-213ENST00000493627 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms