RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 TRAIPQ9BWF2 469 aa8.97□□□□□ -0.97
NCKAP1-207ENST00000493359 ANKRD26Q9UPS8 1709 aa8.97□□□□□ -0.97
NCKAP1-207ENST00000493359 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
NCKAP1-207ENST00000493359 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.97
NCKAP1-207ENST00000493359 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.97
NCKAP1-207ENST00000493359 FDX1P10109 184 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 WDR43Q15061 677 aaKnown RBP eCLIP8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 KCTD17Q8N5Z5 321 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 GLMNQ92990 594 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 ZBED2Q9BTP6 218 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 ANKARQ7Z5J8 1434 aa8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 NKTRP30414 1462 aaKnown RBP8.96□□□□□ -0.98
NCKAP1-207ENST00000493359 MON2Q7Z3U7 1717 aa8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 NALCNQ8IZF0 1738 aa8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 GCGRP47871 477 aa8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 PNISRQ8TF01 805 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 CFAP53Q96M91 514 aa8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 NDUFB9Q9Y6M9 179 aa8.95□□□□□ -0.98
NCKAP1-207ENST00000493359 FMN2Q9NZ56 1722 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 AKAP12Q02952 1782 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 TK2O00142 265 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 HOXA2O43364 376 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 NPM2Q86SE8 214 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 AEBP1Q8IUX7 1158 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 TSC1Q92574 1164 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 KIAA1468Q9P260 1216 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 CPSF1Q10570 1443 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 ADGRL3Q9HAR2 1447 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 LMTK3Q96Q04 1460 aa8.94□□□□□ -0.98
NCKAP1-207ENST00000493359 POM121CA8CG34 1229 aa8.93□□□□□ -0.98
NCKAP1-207ENST00000493359 TNNT2P45379 298 aaPredicted RBP8.93□□□□□ -0.98
NCKAP1-207ENST00000493359 RETREG2Q8NC44 543 aa8.93□□□□□ -0.98
NCKAP1-207ENST00000493359 ZBED9Q6R2W3 1325 aa8.93□□□□□ -0.98
NCKAP1-207ENST00000493359 PRR36Q9H6K5 1346 aa8.93□□□□□ -0.98
NCKAP1-207ENST00000493359 INSRP06213 1382 aa8.93□□□□□ -0.98
NCKAP1-207ENST00000493359 NRKQ7Z2Y5 1582 aa8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 BLMP54132 1417 aaPredicted RBP8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 POLR3AO14802 1390 aaPredicted RBP8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 HRO43593 1189 aa8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 HELBQ8NG08 1087 aaPredicted RBP8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 GGNBP2Q9H3C7 697 aa8.92□□□□□ -0.98
NCKAP1-207ENST00000493359 ACEP12821 1306 aa8.91□□□□□ -0.98
NCKAP1-207ENST00000493359 HSPA2P54652 639 aa8.91□□□□□ -0.98
NCKAP1-207ENST00000493359 MTMR2Q13614 643 aa8.91□□□□□ -0.98
NCKAP1-207ENST00000493359 WASHC4Q2M389 1173 aa8.91□□□□□ -0.98
NCKAP1-207ENST00000493359 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
NCKAP1-207ENST00000493359 USP6P35125 1406 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 FYB1O15117 783 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 PDE4CQ08493 712 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 NGDNQ8NEJ9 315 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 COG3Q96JB2 828 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.98
NCKAP1-207ENST00000493359 HDGFL1Q5TGJ6 251 aa8.89□□□□□ -0.99
NCKAP1-207ENST00000493359 GJD4Q96KN9 370 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-207ENST00000493359 PCDHGC3Q9UN70 934 aa8.89□□□□□ -0.99
NCKAP1-207ENST00000493359 TTC21AQ8NDW8 1320 aa8.88□□□□□ -0.99
NCKAP1-207ENST00000493359 C6orf229H3BNL8 230 aa8.88□□□□□ -0.99
NCKAP1-207ENST00000493359 MTHFSP49914 203 aa8.88□□□□□ -0.99
NCKAP1-207ENST00000493359 PMFBP1Q8TBY8 1022 aa8.88□□□□□ -0.99
NCKAP1-207ENST00000493359 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
NCKAP1-207ENST00000493359 SHPRHQ149N8 1683 aa8.88□□□□□ -0.99
NCKAP1-207ENST00000493359 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 SLC10A3P09131 477 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 NME9Q86XW9 330 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 HLA-CQ95604 372 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 ADAMTS8Q9UP79 889 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 NUDCQ9Y266 331 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 KIF1AQ12756 1690 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 DCCP43146 1447 aa8.87□□□□□ -0.99
NCKAP1-207ENST00000493359 BHMG1C9JSJ3 638 aaPredicted RBP8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 NEFLP07196 543 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 RFX1P22670 979 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 IRF5Q13568 498 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 HMX1Q9NP08 348 aaPredicted RBP8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 SEPT9Q9UHD8 586 aaPredicted RBP8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 RABGEF1Q9UJ41 708 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 MSH6P52701 1360 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 TMEM94Q12767 1356 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 AATKQ6ZMQ8 1374 aa8.86□□□□□ -0.99
NCKAP1-207ENST00000493359 CDK12Q9NYV4 1490 aaPredicted RBP8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 ATF3P18847 181 aa8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 RGPD8O14715 1765 aaPredicted RBP8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 STRCQ7RTU9 1775 aa8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 OVOS2A0A0J9YW53 1432 aa8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 OVOS2Q6IE36 1432 aa8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 SMG6Q86US8 1419 aaKnown RBP8.85□□□□□ -0.99
NCKAP1-207ENST00000493359 COL3A1P02461 1466 aaPredicted RBP8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 PPM1GO15355 546 aaPredicted RBP8.84□□□□□ -0.99
NCKAP1-207ENST00000493359 RNF40O75150 1001 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms