RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 CYP19A1P11511 503 aaPredicted RBP29.23■■■□□ 2.27
PFDN4-205ENST00000493356 SLC39A6Q13433 755 aa29.22■■■□□ 2.27
PFDN4-205ENST00000493356 AMER1Q5JTC6 1135 aaPredicted RBP29.22■■■□□ 2.27
PFDN4-205ENST00000493356 TNRC6CQ9HCJ0 1690 aaKnown RBP29.21■■■□□ 2.27
PFDN4-205ENST00000493356 NRXN2Q9P2S2 1712 aa29.21■■■□□ 2.27
PFDN4-205ENST00000493356 RNMTO43148 476 aaKnown RBP29.21■■■□□ 2.27
PFDN4-205ENST00000493356 NARFQ9UHQ1 456 aa29.2■■■□□ 2.26
PFDN4-205ENST00000493356 COL15A1P39059 1388 aa29.2■■■□□ 2.26
PFDN4-205ENST00000493356 HMOX1P09601 288 aa29.19■■■□□ 2.26
PFDN4-205ENST00000493356 FSTL1Q12841 308 aa29.19■■■□□ 2.26
PFDN4-205ENST00000493356 NFIXQ14938 502 aa29.19■■■□□ 2.26
PFDN4-205ENST00000493356 ZBTB1Q9Y2K1 713 aa29.18■■■□□ 2.26
PFDN4-205ENST00000493356 DLEC1Q9Y238 1755 aa29.18■■■□□ 2.26
PFDN4-205ENST00000493356 RRAGCQ9HB90 399 aa29.17■■■□□ 2.26
PFDN4-205ENST00000493356 HTRA3P83110 453 aa29.16■■■□□ 2.26
PFDN4-205ENST00000493356 UBR2Q8IWV8 1755 aa29.16■■■□□ 2.26
PFDN4-205ENST00000493356 BCL2L12Q9HB09 334 aa29.15■■■□□ 2.26
PFDN4-205ENST00000493356 RASSF7Q02833 373 aa29.14■■■□□ 2.26
PFDN4-205ENST00000493356 MTHFSDQ2M296 383 aaKnown RBP29.14■■■□□ 2.26
PFDN4-205ENST00000493356 VSIG10Q8N0Z9 540 aa29.13■■■□□ 2.25
PFDN4-205ENST00000493356 KLRG1Q96E93 195 aa29.13■■■□□ 2.25
PFDN4-205ENST00000493356 ZC3H4Q9UPT8 1303 aaKnown RBP29.13■■■□□ 2.25
PFDN4-205ENST00000493356 SERPINB2P05120 415 aa29.12■■■□□ 2.25
PFDN4-205ENST00000493356 LMNB1P20700 586 aa29.09■■■□□ 2.25
PFDN4-205ENST00000493356 PRELPP51888 382 aa29.09■■■□□ 2.25
PFDN4-205ENST00000493356 TTLL6Q8N841 843 aa29.09■■■□□ 2.25
PFDN4-205ENST00000493356 JMYQ8N9B5 988 aa29.09■■■□□ 2.25
PFDN4-205ENST00000493356 KIF7Q2M1P5 1343 aa29.09■■■□□ 2.25
PFDN4-205ENST00000493356 CARMIL3Q8ND23 1372 aa29.09■■■□□ 2.25
PFDN4-205ENST00000493356 DIAPH1O60610 1272 aaKnown RBP29.08■■■□□ 2.25
PFDN4-205ENST00000493356 CANXP27824 592 aaKnown RBP29.08■■■□□ 2.25
PFDN4-205ENST00000493356 CCDC88AQ3V6T2 1871 aa29.08■■■□□ 2.25
PFDN4-205ENST00000493356 C2CD5Q86YS7 1000 aa29.07■■■□□ 2.24
PFDN4-205ENST00000493356 TIAM2Q8IVF5 1701 aa29.07■■■□□ 2.24
PFDN4-205ENST00000493356 SMC1BQ8NDV3 1235 aa29.07■■■□□ 2.24
PFDN4-205ENST00000493356 EIF5P55010 431 aaKnown RBP29.06■■■□□ 2.24
PFDN4-205ENST00000493356 PER1O15534 1290 aaPredicted RBP29.05■■■□□ 2.24
PFDN4-205ENST00000493356 GLTPD2A6NH11 291 aa29.04■■■□□ 2.24
PFDN4-205ENST00000493356 H0YIN7 160 aa29.04■■■□□ 2.24
PFDN4-205ENST00000493356 STARD3NLO95772 234 aa29.04■■■□□ 2.24
PFDN4-205ENST00000493356 TTC5Q8N0Z6 440 aa29.04■■■□□ 2.24
PFDN4-205ENST00000493356 ANKRD31Q8N7Z5 1873 aa29.04■■■□□ 2.24
PFDN4-205ENST00000493356 PCNTO95613 3336 aa29.03■■■□□ 2.24
PFDN4-205ENST00000493356 BICDL1Q6ZP65 573 aa29.03■■■□□ 2.24
PFDN4-205ENST00000493356 SCN7AQ01118 1682 aa29.02■■■□□ 2.24
PFDN4-205ENST00000493356 NFKBIEO00221 500 aa29.02■■■□□ 2.24
PFDN4-205ENST00000493356 CC2D1BQ5T0F9 858 aaKnown RBP29.02■■■□□ 2.24
PFDN4-205ENST00000493356 CCER1Q8TC90 406 aaPredicted RBP29.02■■■□□ 2.24
PFDN4-205ENST00000493356 SIPA1L3O60292 1781 aaPredicted RBP29.01■■■□□ 2.23
PFDN4-205ENST00000493356 A0A087WZG4 1122 aa29.01■■■□□ 2.23
PFDN4-205ENST00000493356 VEGFAP15692 232 aaPredicted RBP29.01■■■□□ 2.23
PFDN4-205ENST00000493356 ZNF496Q96IT1 587 aaPredicted RBP29.01■■■□□ 2.23
PFDN4-205ENST00000493356 COL3A1P02461 1466 aaPredicted RBP29.01■■■□□ 2.23
PFDN4-205ENST00000493356 HEG1Q9ULI3 1381 aa29■■■□□ 2.23
PFDN4-205ENST00000493356 TBC1D9BQ66K14 1250 aa28.99■■■□□ 2.23
PFDN4-205ENST00000493356 COL11A2P13942 1736 aaPredicted RBP28.98■■■□□ 2.23
PFDN4-205ENST00000493356 TEFQ10587 303 aa28.98■■■□□ 2.23
PFDN4-205ENST00000493356 ZNF790Q6PG37 636 aa28.98■■■□□ 2.23
PFDN4-205ENST00000493356 IL17REQ8NFR9 667 aa28.98■■■□□ 2.23
PFDN4-205ENST00000493356 COL13A1Q5TAT6 717 aaPredicted RBP28.97■■■□□ 2.23
PFDN4-205ENST00000493356 GNAT3A8MTJ3 354 aa28.96■■■□□ 2.23
PFDN4-205ENST00000493356 BRIP1Q9BX63 1249 aa28.96■■■□□ 2.23
PFDN4-205ENST00000493356 TEX13AQ9BXU3 409 aaPredicted RBP28.96■■■□□ 2.23
PFDN4-205ENST00000493356 FER1L6Q2WGJ9 1857 aa28.95■■■□□ 2.23
PFDN4-205ENST00000493356 DICER1Q9UPY3 1922 aaKnown RBP28.95■■■□□ 2.23
PFDN4-205ENST00000493356 GAS2L2Q8NHY3 880 aa28.95■■■□□ 2.22
PFDN4-205ENST00000493356 ZNF622Q969S3 477 aaKnown RBP eCLIP28.95■■■□□ 2.221e-12■□□□□ 11.2
PFDN4-205ENST00000493356 PDZRN3Q9UPQ7 1066 aa28.95■■■□□ 2.22
PFDN4-205ENST00000493356 TBC1D2BQ9UPU7 963 aa28.95■■■□□ 2.22
PFDN4-205ENST00000493356 U2SURPO15042 1029 aaKnown RBP28.94■■■□□ 2.22
PFDN4-205ENST00000493356 PDE6BP35913 854 aa28.94■■■□□ 2.22
PFDN4-205ENST00000493356 PRR5LQ6MZQ0 368 aa28.94■■■□□ 2.22
PFDN4-205ENST00000493356 ZNF330Q9Y3S2 320 aaPredicted RBP28.94■■■□□ 2.22
PFDN4-205ENST00000493356 IL6STP40189 918 aaPredicted RBP28.93■■■□□ 2.22
PFDN4-205ENST00000493356 CCDC24Q8N4L8 307 aa28.93■■■□□ 2.22
PFDN4-205ENST00000493356 POTECB2RU33 542 aa28.92■■■□□ 2.22
PFDN4-205ENST00000493356 C21orf2O43822 256 aa28.92■■■□□ 2.22
PFDN4-205ENST00000493356 NPC1L1Q9UHC9 1359 aa28.91■■■□□ 2.22
PFDN4-205ENST00000493356 FMNL2Q96PY5 1086 aa28.91■■■□□ 2.22
PFDN4-205ENST00000493356 ZNF219Q9P2Y4 722 aaPredicted RBP28.91■■■□□ 2.22
PFDN4-205ENST00000493356 DPY19L2Q6NUT2 758 aa28.9■■■□□ 2.22
PFDN4-205ENST00000493356 CEMIPQ8WUJ3 1361 aa28.89■■■□□ 2.22
PFDN4-205ENST00000493356 A1BGP04217 495 aa28.89■■■□□ 2.22
PFDN4-205ENST00000493356 BCORQ6W2J9 1755 aa28.88■■■□□ 2.21
PFDN4-205ENST00000493356 ERFEQ4G0M1 354 aa28.88■■■□□ 2.21
PFDN4-205ENST00000493356 CACNA1SQ13698 1873 aa28.88■■■□□ 2.21
PFDN4-205ENST00000493356 CAMTA2O94983 1202 aa28.87■■■□□ 2.21
PFDN4-205ENST00000493356 CNGB1Q14028 1251 aaPredicted RBP28.87■■■□□ 2.21
PFDN4-205ENST00000493356 CNBD1Q8NA66 436 aa28.87■■■□□ 2.21
PFDN4-205ENST00000493356 SETDB2Q96T68 719 aa28.87■■■□□ 2.21
PFDN4-205ENST00000493356 LTBP3Q9NS15 1303 aa28.87■■■□□ 2.21
PFDN4-205ENST00000493356 SLX4Q8IY92 1834 aa28.87■■■□□ 2.21
PFDN4-205ENST00000493356 NPM2Q86SE8 214 aaKnown RBP28.86■■■□□ 2.21
PFDN4-205ENST00000493356 ARFGEF2Q9Y6D5 1785 aa28.85■■■□□ 2.21
PFDN4-205ENST00000493356 KCNQ3O43525 872 aa28.85■■■□□ 2.21
PFDN4-205ENST00000493356 CNKSR1Q969H4 720 aa28.84■■■□□ 2.21
PFDN4-205ENST00000493356 PHACTR3Q96KR7 559 aa28.84■■■□□ 2.21
PFDN4-205ENST00000493356 TAOK3Q9H2K8 898 aa28.84■■■□□ 2.21
PFDN4-205ENST00000493356 BTBD11A6QL63 1104 aa28.83■■■□□ 2.21
PFDN4-205ENST00000493356 NPHP1O15259 732 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms