RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 APBA3O96018 575 aa12.09□□□□□ -0.47
CSTF1-206ENST00000493039 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
CSTF1-206ENST00000493039 PLSCR1O15162 318 aa12.08□□□□□ -0.48
CSTF1-206ENST00000493039 HOXB7P09629 217 aa12.08□□□□□ -0.48
CSTF1-206ENST00000493039 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
CSTF1-206ENST00000493039 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
CSTF1-206ENST00000493039 BRD2P25440 801 aaKnown RBP12.07□□□□□ -0.48
CSTF1-206ENST00000493039 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
CSTF1-206ENST00000493039 PDIA6Q15084 440 aa12.07□□□□□ -0.48
CSTF1-206ENST00000493039 SSH1Q8WYL5 1049 aa12.07□□□□□ -0.48
CSTF1-206ENST00000493039 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
CSTF1-206ENST00000493039 CYP19A1P11511 503 aaPredicted RBP12.07□□□□□ -0.48
CSTF1-206ENST00000493039 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
CSTF1-206ENST00000493039 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 BCAR3O75815 825 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 PROSER3Q2NL68 480 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 NBPF14Q5TI25 921 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
CSTF1-206ENST00000493039 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
CSTF1-206ENST00000493039 A1BGP04217 495 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
CSTF1-206ENST00000493039 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 DHX37Q8IY37 1157 aaKnown RBP12.06□□□□□ -0.48
CSTF1-206ENST00000493039 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 RCAN3Q9UKA8 241 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 C5P01031 1676 aa12.06□□□□□ -0.48
CSTF1-206ENST00000493039 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
CSTF1-206ENST00000493039 ANXA1P04083 346 aa12.05□□□□□ -0.48
CSTF1-206ENST00000493039 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
CSTF1-206ENST00000493039 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
CSTF1-206ENST00000493039 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
CSTF1-206ENST00000493039 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
CSTF1-206ENST00000493039 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
CSTF1-206ENST00000493039 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
CSTF1-206ENST00000493039 LY75O60449 1722 aa12.04□□□□□ -0.48
CSTF1-206ENST00000493039 G2E3Q7L622 706 aa12.04□□□□□ -0.48
CSTF1-206ENST00000493039 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
CSTF1-206ENST00000493039 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
CSTF1-206ENST00000493039 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSTF1-206ENST00000493039 ZNF428Q96B54 188 aa12.04□□□□□ -0.48
CSTF1-206ENST00000493039 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
CSTF1-206ENST00000493039 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
CSTF1-206ENST00000493039 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 CCDC30Q5VVM6 783 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 AMIGO3Q86WK7 504 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 TJP1Q07157 1748 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 STARD3NLO95772 234 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
CSTF1-206ENST00000493039 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
CSTF1-206ENST00000493039 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
CSTF1-206ENST00000493039 SMIM5Q71RC9 77 aa12.02□□□□□ -0.48
CSTF1-206ENST00000493039 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.48
CSTF1-206ENST00000493039 DDX21Q9NR30 783 aaKnown RBP eCLIP12.02□□□□□ -0.48
CSTF1-206ENST00000493039 ZBTB1Q9Y2K1 713 aa12.02□□□□□ -0.48
CSTF1-206ENST00000493039 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.49
CSTF1-206ENST00000493039 CICQ96RK0 1608 aaPredicted RBP12.02□□□□□ -0.49
CSTF1-206ENST00000493039 CCDC125Q86Z20 511 aa12.02□□□□□ -0.49
CSTF1-206ENST00000493039 SMC4Q9NTJ3 1288 aa12.02□□□□□ -0.49
CSTF1-206ENST00000493039 DBF4Q9UBU7 674 aaPredicted RBP12.02□□□□□ -0.49
CSTF1-206ENST00000493039 MYH14Q7Z406 1995 aaKnown RBP12.01□□□□□ -0.49
CSTF1-206ENST00000493039 MYL6BP14649 208 aa12.01□□□□□ -0.49
CSTF1-206ENST00000493039 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
CSTF1-206ENST00000493039 PLIN1O60240 522 aa12□□□□□ -0.49
CSTF1-206ENST00000493039 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
CSTF1-206ENST00000493039 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
CSTF1-206ENST00000493039 TNNQ9UQP3 1299 aa12□□□□□ -0.49
CSTF1-206ENST00000493039 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
CSTF1-206ENST00000493039 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
CSTF1-206ENST00000493039 EIF5P55010 431 aaKnown RBP11.99□□□□□ -0.49
CSTF1-206ENST00000493039 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
CSTF1-206ENST00000493039 STK31Q9BXU1 1019 aa11.99□□□□□ -0.49
CSTF1-206ENST00000493039 NOB1Q9ULX3 412 aaKnown RBP11.99□□□□□ -0.49
CSTF1-206ENST00000493039 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
CSTF1-206ENST00000493039 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
CSTF1-206ENST00000493039 BAG6P46379 1132 aa11.99□□□□□ -0.49
CSTF1-206ENST00000493039 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
CSTF1-206ENST00000493039 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
CSTF1-206ENST00000493039 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 FLIIQ13045 1269 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 TMEM132AQ24JP5 1023 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 TTLL7Q6ZT98 887 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 COPS6Q7L5N1 327 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 HYPKQ9NX55 129 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 IL6STP40189 918 aaPredicted RBP11.98□□□□□ -0.49
CSTF1-206ENST00000493039 XAGE3Q8WTP9 111 aa11.98□□□□□ -0.49
CSTF1-206ENST00000493039 TAF1LQ8IZX4 1826 aa11.97□□□□□ -0.49
CSTF1-206ENST00000493039 RPS6KA4O75676 772 aa11.97□□□□□ -0.49
CSTF1-206ENST00000493039 RGPD3A6NKT7 1758 aaPredicted RBP11.97□□□□□ -0.49
CSTF1-206ENST00000493039 RGPD4Q7Z3J3 1758 aa11.97□□□□□ -0.49
CSTF1-206ENST00000493039 GNPATO15228 680 aa11.96□□□□□ -0.49
CSTF1-206ENST00000493039 TRIM27P14373 513 aa11.96□□□□□ -0.49
CSTF1-206ENST00000493039 AIMP1Q12904 312 aaKnown RBP11.96□□□□□ -0.49
CSTF1-206ENST00000493039 C20orf194Q5TEA3 1177 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms