RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RLBP1P12271 317 aa17.94■□□□□ 0.46
PDZRN3-210ENST00000492909 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-210ENST00000492909 ACSBG1Q96GR2 724 aa17.94■□□□□ 0.46
PDZRN3-210ENST00000492909 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
PDZRN3-210ENST00000492909 KCPQ6ZWJ8 1503 aa17.93■□□□□ 0.46
PDZRN3-210ENST00000492909 PTPRCP08575 1304 aa17.93■□□□□ 0.46
PDZRN3-210ENST00000492909 TRIM37O94972 964 aa17.93■□□□□ 0.46
PDZRN3-210ENST00000492909 PRIM1P49642 420 aaKnown RBP17.93■□□□□ 0.46
PDZRN3-210ENST00000492909 API5Q9BZZ5 524 aaKnown RBP17.93■□□□□ 0.46
PDZRN3-210ENST00000492909 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
PDZRN3-210ENST00000492909 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
PDZRN3-210ENST00000492909 COG6Q9Y2V7 657 aa17.92■□□□□ 0.46
PDZRN3-210ENST00000492909 KCNQ2O43526 872 aa17.91■□□□□ 0.46
PDZRN3-210ENST00000492909 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
PDZRN3-210ENST00000492909 ASAP1Q9ULH1 1129 aa17.91■□□□□ 0.46
PDZRN3-210ENST00000492909 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-210ENST00000492909 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-210ENST00000492909 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
PDZRN3-210ENST00000492909 CHPF2Q9P2E5 772 aa17.9■□□□□ 0.46
PDZRN3-210ENST00000492909 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
PDZRN3-210ENST00000492909 FLIIQ13045 1269 aa17.89■□□□□ 0.45
PDZRN3-210ENST00000492909 G2E3Q7L622 706 aa17.89■□□□□ 0.45
PDZRN3-210ENST00000492909 ABCC4O15439 1325 aa17.89■□□□□ 0.45
PDZRN3-210ENST00000492909 SOCS7O14512 581 aa17.89■□□□□ 0.45
PDZRN3-210ENST00000492909 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
PDZRN3-210ENST00000492909 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
PDZRN3-210ENST00000492909 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
PDZRN3-210ENST00000492909 FKBP5Q13451 457 aaPredicted RBP17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 VSIG10Q8N0Z9 540 aa17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 ANP32EQ9BTT0 268 aa17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 DDX21Q9NR30 783 aaKnown RBP eCLIP17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 DDX19BQ9UMR2 479 aa17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 AAMPQ13685 434 aa17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 PHAXQ9H814 394 aaKnown RBP17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 HYPKQ9NX55 129 aa17.86■□□□□ 0.45
PDZRN3-210ENST00000492909 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
PDZRN3-210ENST00000492909 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-210ENST00000492909 NHSQ6T4R5 1651 aa17.85■□□□□ 0.45
PDZRN3-210ENST00000492909 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 ANXA1P04083 346 aa17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 PDIA6Q15084 440 aa17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 ERBB4Q15303 1308 aa17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
PDZRN3-210ENST00000492909 APBA3O96018 575 aa17.83■□□□□ 0.44
PDZRN3-210ENST00000492909 SF3B2Q13435 895 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-210ENST00000492909 INTS3Q68E01 1043 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-210ENST00000492909 N4BP2Q86UW6 1770 aaPredicted RBP17.83■□□□□ 0.44
PDZRN3-210ENST00000492909 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
PDZRN3-210ENST00000492909 CHMP4BQ9H444 224 aaKnown RBP17.82■□□□□ 0.44
PDZRN3-210ENST00000492909 BTAF1O14981 1849 aa17.82■□□□□ 0.44
PDZRN3-210ENST00000492909 F6X3S4 739 aa17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 MYL6BP14649 208 aa17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 PXDNLA1KZ92 1463 aa17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 TJP1Q07157 1748 aa17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 EN1Q05925 392 aaPredicted RBP17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 CCDC125Q86Z20 511 aa17.81■□□□□ 0.44
PDZRN3-210ENST00000492909 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
PDZRN3-210ENST00000492909 STARD3NLO95772 234 aa17.8■□□□□ 0.44
PDZRN3-210ENST00000492909 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
PDZRN3-210ENST00000492909 DNAJC10Q8IXB1 793 aa17.8■□□□□ 0.44
PDZRN3-210ENST00000492909 CICQ96RK0 1608 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-210ENST00000492909 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-210ENST00000492909 SLC4A9Q96Q91 983 aa17.79■□□□□ 0.44
PDZRN3-210ENST00000492909 PI4KAP2A4QPH2 592 aa17.79■□□□□ 0.44
PDZRN3-210ENST00000492909 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
PDZRN3-210ENST00000492909 PI4KAP1Q8N8J0 262 aa17.79■□□□□ 0.44
PDZRN3-210ENST00000492909 ZNF831Q5JPB2 1677 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 LOC102724428A0A0B4J2F2 783 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 A1BGP04217 495 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 PIP4K2AP48426 406 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 SIK1P57059 783 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 AIMP1Q12904 312 aaKnown RBP17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 ZBTB40Q9NUA8 1239 aa17.78■□□□□ 0.44
PDZRN3-210ENST00000492909 BAG6P46379 1132 aa17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 EZH2Q15910 746 aaKnown RBP17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 KSR2Q6VAB6 950 aa17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 ADCY9O60503 1353 aa17.77■□□□□ 0.44
PDZRN3-210ENST00000492909 CYP19A1P11511 503 aaPredicted RBP17.76■□□□□ 0.43
PDZRN3-210ENST00000492909 ATP6V1AP38606 617 aa17.76■□□□□ 0.43
PDZRN3-210ENST00000492909 MAP3K2Q9Y2U5 619 aa17.76■□□□□ 0.43
PDZRN3-210ENST00000492909 CAMKK2Q96RR4 588 aa17.75■□□□□ 0.43
PDZRN3-210ENST00000492909 KCNQ4P56696 695 aa17.74■□□□□ 0.43
PDZRN3-210ENST00000492909 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
PDZRN3-210ENST00000492909 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
PDZRN3-210ENST00000492909 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
PDZRN3-210ENST00000492909 PROM2Q8N271 834 aa17.74■□□□□ 0.43
PDZRN3-210ENST00000492909 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms