RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TRPM2O94759 1503 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 RPS6KA5O75582 802 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 TUBB4AP04350 444 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 ST5P78524 1137 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 NRBP1Q9UHY1 535 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 MRVI1Q9Y6F6 885 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 ZSCAN22P10073 491 aaPredicted RBP11.49□□□□□ -0.57
VPS8-225ENST00000492449 SATB1Q01826 763 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 FILIP1Q7Z7B0 1213 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 MORC1Q86VD1 984 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 LRRC8AQ8IWT6 810 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.49□□□□□ -0.57
VPS8-225ENST00000492449 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 PLEKHF1Q96S99 279 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 ARGLU1Q9NWB6 273 aaPredicted RBP11.49□□□□□ -0.57
VPS8-225ENST00000492449 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.49□□□□□ -0.57
VPS8-225ENST00000492449 ATP6V1DQ9Y5K8 247 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 PTPRTO14522 1441 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 FANCAO15360 1455 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 SAMD9LQ8IVG5 1584 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 CPP00450 1065 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 PACS2Q86VP3 889 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 REXO1L1PQ8IX06 675 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 ZNF592Q92610 1267 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 AK7Q96M32 723 aa11.49□□□□□ -0.57
VPS8-225ENST00000492449 IVLP07476 585 aa11.48□□□□□ -0.57
VPS8-225ENST00000492449 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
VPS8-225ENST00000492449 RPAINQ86UA6 219 aa11.48□□□□□ -0.57
VPS8-225ENST00000492449 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
VPS8-225ENST00000492449 SARM1Q6SZW1 724 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 TMCO3Q6UWJ1 677 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 CEP89Q96ST8 783 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 PREX2Q70Z35 1606 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 USP27XA6NNY8 438 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 EPB41L2O43491 1005 aaKnown RBP11.47□□□□□ -0.57
VPS8-225ENST00000492449 ACTN2P35609 894 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
VPS8-225ENST00000492449 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
VPS8-225ENST00000492449 CCAR2Q8N163 923 aaKnown RBP11.47□□□□□ -0.57
VPS8-225ENST00000492449 CXorf56Q9H5V9 222 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 EXOC6BQ9Y2D4 811 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 NSD2O96028 1365 aa11.47□□□□□ -0.57
VPS8-225ENST00000492449 TYRO3Q06418 890 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 ERCC6LQ2NKX8 1250 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 PPM1EQ8WY54 764 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 COL3A1P02461 1466 aaPredicted RBP11.46□□□□□ -0.57
VPS8-225ENST00000492449 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.57
VPS8-225ENST00000492449 MCCP23508 829 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 CCDC144BQ3MJ40 725 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
VPS8-225ENST00000492449 MAP3K4Q9Y6R4 1608 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 ABCA8O94911 1581 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 CAVIN2O95810 425 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 F13A1P00488 732 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 TPM1P09493 284 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 MTHFSP49914 203 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 MAP3K11Q16584 847 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 MCTP2Q6DN12 878 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.58
VPS8-225ENST00000492449 OAS2P29728 719 aaKnown RBP11.45□□□□□ -0.58
VPS8-225ENST00000492449 LUZP1Q86V48 1076 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 MRFAP1L1Q96HT8 127 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 ORC3Q9UBD5 711 aaPredicted RBP11.45□□□□□ -0.58
VPS8-225ENST00000492449 IFT172Q9UG01 1749 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 POLR3GO15318 223 aaPredicted RBP11.45□□□□□ -0.58
VPS8-225ENST00000492449 CCZ1BP86790 482 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 CCZ1P86791 482 aaPredicted RBP11.45□□□□□ -0.58
VPS8-225ENST00000492449 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
VPS8-225ENST00000492449 TRIM5Q9C035 493 aa11.45□□□□□ -0.58
VPS8-225ENST00000492449 KCNJ6P48051 423 aa11.44□□□□□ -0.58
VPS8-225ENST00000492449 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.44□□□□□ -0.58
VPS8-225ENST00000492449 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
VPS8-225ENST00000492449 ARHGEF40Q8TER5 1519 aa11.44□□□□□ -0.58
VPS8-225ENST00000492449 ARHGAP29Q52LW3 1261 aa11.44□□□□□ -0.58
VPS8-225ENST00000492449 ANKRD26Q9UPS8 1709 aa11.44□□□□□ -0.58
VPS8-225ENST00000492449 GLI2P10070 1586 aa11.44□□□□□ -0.58
VPS8-225ENST00000492449 STX6O43752 255 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 CORO7P57737 925 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 GPATCH11Q8N954 259 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 CDC42BPGQ6DT37 1551 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 TBC1D8O95759 1140 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 SMC1AQ14683 1233 aaKnown RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 MMS22LQ6ZRQ5 1243 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 EP400NLQ6ZTU2 488 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 TOMM22Q9NS69 142 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 U2AF1L5P0DN76 240 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms