RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.28
TOP3B-217ENST00000489581 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
TOP3B-217ENST00000489581 NFIXQ14938 502 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 RRAGCQ9HB90 399 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 ZBTB1Q9Y2K1 713 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 KDM2BQ8NHM5 1336 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
TOP3B-217ENST00000489581 MTHFSDQ2M296 383 aaKnown RBP23.04■■□□□ 1.28
TOP3B-217ENST00000489581 NARFQ9UHQ1 456 aa23.04■■□□□ 1.28
TOP3B-217ENST00000489581 MRC1P22897 1456 aa23.04■■□□□ 1.28
TOP3B-217ENST00000489581 COL15A1P39059 1388 aa23.03■■□□□ 1.28
TOP3B-217ENST00000489581 HTRA3P83110 453 aa23.03■■□□□ 1.28
TOP3B-217ENST00000489581 CCDC88AQ3V6T2 1871 aa23.02■■□□□ 1.28
TOP3B-217ENST00000489581 RASSF7Q02833 373 aa23.02■■□□□ 1.28
TOP3B-217ENST00000489581 BCL2L12Q9HB09 334 aa23.02■■□□□ 1.28
TOP3B-217ENST00000489581 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
TOP3B-217ENST00000489581 NRXN2Q9P2S2 1712 aa23.01■■□□□ 1.27
TOP3B-217ENST00000489581 SERPINB2P05120 415 aa23■■□□□ 1.27
TOP3B-217ENST00000489581 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
TOP3B-217ENST00000489581 FSTL1Q12841 308 aa23■■□□□ 1.27
TOP3B-217ENST00000489581 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
TOP3B-217ENST00000489581 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
TOP3B-217ENST00000489581 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
TOP3B-217ENST00000489581 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
TOP3B-217ENST00000489581 TNRC6CQ9HCJ0 1690 aaKnown RBP22.99■■□□□ 1.27
TOP3B-217ENST00000489581 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
TOP3B-217ENST00000489581 UBR2Q8IWV8 1755 aa22.97■■□□□ 1.27
TOP3B-217ENST00000489581 BICDL1Q6ZP65 573 aa22.97■■□□□ 1.27
TOP3B-217ENST00000489581 C2CD5Q86YS7 1000 aa22.96■■□□□ 1.27
TOP3B-217ENST00000489581 TTLL6Q8N841 843 aa22.96■■□□□ 1.27
TOP3B-217ENST00000489581 KLRG1Q96E93 195 aa22.96■■□□□ 1.27
TOP3B-217ENST00000489581 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
TOP3B-217ENST00000489581 PRELPP51888 382 aa22.95■■□□□ 1.26
TOP3B-217ENST00000489581 TTC5Q8N0Z6 440 aa22.95■■□□□ 1.26
TOP3B-217ENST00000489581 CARMIL3Q8ND23 1372 aa22.94■■□□□ 1.26
TOP3B-217ENST00000489581 STARD3NLO95772 234 aa22.94■■□□□ 1.26
TOP3B-217ENST00000489581 LMNB1P20700 586 aa22.94■■□□□ 1.26
TOP3B-217ENST00000489581 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
TOP3B-217ENST00000489581 H0YIN7 160 aa22.93■■□□□ 1.26
TOP3B-217ENST00000489581 EIF5P55010 431 aaKnown RBP22.93■■□□□ 1.26
TOP3B-217ENST00000489581 SMC1BQ8NDV3 1235 aa22.93■■□□□ 1.26
TOP3B-217ENST00000489581 ZC3H4Q9UPT8 1303 aaKnown RBP22.92■■□□□ 1.26
TOP3B-217ENST00000489581 ZNF496Q96IT1 587 aaPredicted RBP22.92■■□□□ 1.26
TOP3B-217ENST00000489581 A0A087WZG4 1122 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
TOP3B-217ENST00000489581 TEFQ10587 303 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 ZNF330Q9Y3S2 320 aaPredicted RBP22.91■■□□□ 1.26
TOP3B-217ENST00000489581 ANKRD31Q8N7Z5 1873 aa22.91■■□□□ 1.26
TOP3B-217ENST00000489581 CCDC24Q8N4L8 307 aa22.9■■□□□ 1.26
TOP3B-217ENST00000489581 JMYQ8N9B5 988 aa22.9■■□□□ 1.26
TOP3B-217ENST00000489581 TIAM2Q8IVF5 1701 aa22.89■■□□□ 1.26
TOP3B-217ENST00000489581 NFKBIEO00221 500 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
TOP3B-217ENST00000489581 ZNF790Q6PG37 636 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 ZNF622Q969S3 477 aaKnown RBP eCLIP22.89■■□□□ 1.255e-19■■□□□ 13.6
TOP3B-217ENST00000489581 TBC1D2BQ9UPU7 963 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.25
TOP3B-217ENST00000489581 GNAT3A8MTJ3 354 aa22.88■■□□□ 1.25
TOP3B-217ENST00000489581 ZNF219Q9P2Y4 722 aaPredicted RBP22.88■■□□□ 1.25
TOP3B-217ENST00000489581 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
TOP3B-217ENST00000489581 GAS2L2Q8NHY3 880 aa22.87■■□□□ 1.25
TOP3B-217ENST00000489581 COL3A1P02461 1466 aaPredicted RBP22.86■■□□□ 1.25
TOP3B-217ENST00000489581 PCNTO95613 3336 aa22.86■■□□□ 1.25
TOP3B-217ENST00000489581 A1BGP04217 495 aa22.86■■□□□ 1.25
TOP3B-217ENST00000489581 TEX13AQ9BXU3 409 aaPredicted RBP22.86■■□□□ 1.25
TOP3B-217ENST00000489581 SCN7AQ01118 1682 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 DICER1Q9UPY3 1922 aaKnown RBP22.85■■□□□ 1.25
TOP3B-217ENST00000489581 C21orf2O43822 256 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 BRIP1Q9BX63 1249 aa22.85■■□□□ 1.25
TOP3B-217ENST00000489581 CACNA1SQ13698 1873 aa22.84■■□□□ 1.25
TOP3B-217ENST00000489581 FER1L6Q2WGJ9 1857 aa22.84■■□□□ 1.25
TOP3B-217ENST00000489581 PDE6BP35913 854 aa22.84■■□□□ 1.25
TOP3B-217ENST00000489581 COL13A1Q5TAT6 717 aaPredicted RBP22.84■■□□□ 1.25
TOP3B-217ENST00000489581 COL11A2P13942 1736 aaPredicted RBP22.84■■□□□ 1.25
TOP3B-217ENST00000489581 IL6STP40189 918 aaPredicted RBP22.83■■□□□ 1.25
TOP3B-217ENST00000489581 FMNL2Q96PY5 1086 aa22.83■■□□□ 1.25
TOP3B-217ENST00000489581 POTECB2RU33 542 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 KCNQ3O43525 872 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 DPY19L2Q6NUT2 758 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
TOP3B-217ENST00000489581 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
TOP3B-217ENST00000489581 SLX4Q8IY92 1834 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 NPHP1O15259 732 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 ERFEQ4G0M1 354 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 SETDB2Q96T68 719 aa22.81■■□□□ 1.24
TOP3B-217ENST00000489581 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
TOP3B-217ENST00000489581 CAMTA2O94983 1202 aa22.8■■□□□ 1.24
TOP3B-217ENST00000489581 PHACTR3Q96KR7 559 aa22.8■■□□□ 1.24
TOP3B-217ENST00000489581 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
TOP3B-217ENST00000489581 CNBD1Q8NA66 436 aa22.79■■□□□ 1.24
TOP3B-217ENST00000489581 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
TOP3B-217ENST00000489581 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
TOP3B-217ENST00000489581 PIP4K2AP48426 406 aaPredicted RBP22.78■■□□□ 1.24
TOP3B-217ENST00000489581 DZIP3Q86Y13 1208 aaKnown RBP22.78■■□□□ 1.24
TOP3B-217ENST00000489581 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
TOP3B-217ENST00000489581 BCORQ6W2J9 1755 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms