RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 COL23A1Q86Y22 540 aaPredicted RBP10.32□□□□□ -0.76
SSR1-210ENST00000489567 VSIG10Q8N0Z9 540 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
SSR1-210ENST00000489567 MYH14Q7Z406 1995 aaKnown RBP10.31□□□□□ -0.76
SSR1-210ENST00000489567 UBR3Q6ZT12 1888 aa10.31□□□□□ -0.76
SSR1-210ENST00000489567 KDM3BQ7LBC6 1761 aa10.31□□□□□ -0.76
SSR1-210ENST00000489567 PHF14O94880 888 aa10.31□□□□□ -0.76
SSR1-210ENST00000489567 INTS5Q6P9B9 1019 aaKnown RBP10.31□□□□□ -0.76
SSR1-210ENST00000489567 CNTNAP4Q9C0A0 1308 aa10.31□□□□□ -0.76
SSR1-210ENST00000489567 QSER1Q2KHR3 1735 aa10.3□□□□□ -0.76
SSR1-210ENST00000489567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
SSR1-210ENST00000489567 EIF4A1P60842 406 aaKnown RBP10.3□□□□□ -0.76
SSR1-210ENST00000489567 RC3H1Q5TC82 1133 aaKnown RBP10.3□□□□□ -0.76
SSR1-210ENST00000489567 SALL2Q9Y467 1007 aaPredicted RBP10.3□□□□□ -0.76
SSR1-210ENST00000489567 USP16Q9Y5T5 823 aa10.3□□□□□ -0.76
SSR1-210ENST00000489567 TSPYL4Q9UJ04 414 aa10.3□□□□□ -0.76
SSR1-210ENST00000489567 ZBTB1Q9Y2K1 713 aa10.3□□□□□ -0.76
SSR1-210ENST00000489567 CHL1O00533 1208 aa10.29□□□□□ -0.76
SSR1-210ENST00000489567 RPS6KA4O75676 772 aa10.29□□□□□ -0.76
SSR1-210ENST00000489567 WWC1Q8IX03 1113 aa10.29□□□□□ -0.76
SSR1-210ENST00000489567 CCDC87Q9NVE4 849 aa10.29□□□□□ -0.76
SSR1-210ENST00000489567 ATF5Q9Y2D1 282 aaPredicted RBP10.29□□□□□ -0.76
SSR1-210ENST00000489567 LAS1LQ9Y4W2 734 aaKnown RBP10.29□□□□□ -0.76
SSR1-210ENST00000489567 A1BGP04217 495 aa10.28□□□□□ -0.76
SSR1-210ENST00000489567 SNRPA1P09661 255 aaKnown RBP10.28□□□□□ -0.76
SSR1-210ENST00000489567 SSFA2P28290 1259 aa10.28□□□□□ -0.76
SSR1-210ENST00000489567 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
SSR1-210ENST00000489567 RTCBQ9Y3I0 505 aaKnown RBP10.28□□□□□ -0.76
SSR1-210ENST00000489567 GIGYF1O75420 1035 aaPredicted RBP10.27□□□□□ -0.76
SSR1-210ENST00000489567 ZNF853P0CG23 659 aa10.27□□□□□ -0.76
SSR1-210ENST00000489567 HMGB2P26583 209 aaKnown RBP10.27□□□□□ -0.76
SSR1-210ENST00000489567 PTGER2P43116 358 aa10.27□□□□□ -0.76
SSR1-210ENST00000489567 PIP4K2AP48426 406 aaPredicted RBP10.27□□□□□ -0.76
SSR1-210ENST00000489567 CCDC27Q2M243 656 aa10.27□□□□□ -0.76
SSR1-210ENST00000489567 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.76
SSR1-210ENST00000489567 CFAP44Q96MT7 982 aa10.27□□□□□ -0.76
SSR1-210ENST00000489567 STARD3NLO95772 234 aa10.27□□□□□ -0.77
SSR1-210ENST00000489567 CANXP27824 592 aaKnown RBP10.27□□□□□ -0.77
SSR1-210ENST00000489567 MSL1Q68DK7 614 aa10.27□□□□□ -0.77
SSR1-210ENST00000489567 SGIP1Q9BQI5 828 aa10.27□□□□□ -0.77
SSR1-210ENST00000489567 MTFR1LQ9H019 292 aa10.27□□□□□ -0.77
SSR1-210ENST00000489567 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
SSR1-210ENST00000489567 BABAM1Q9NWV8 329 aa10.27□□□□□ -0.77
SSR1-210ENST00000489567 SOS1Q07889 1333 aaPredicted RBP10.27□□□□□ -0.77
SSR1-210ENST00000489567 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
SSR1-210ENST00000489567 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
SSR1-210ENST00000489567 FLAD1Q8NFF5 587 aa10.26□□□□□ -0.77
SSR1-210ENST00000489567 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
SSR1-210ENST00000489567 SPON1Q9HCB6 807 aa10.26□□□□□ -0.77
SSR1-210ENST00000489567 LRP5O75197 1615 aa10.26□□□□□ -0.77
SSR1-210ENST00000489567 NBPF26B4DH59 902 aa10.25□□□□□ -0.77
SSR1-210ENST00000489567 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
SSR1-210ENST00000489567 NBPF10Q6P3W6 841 aaKnown RBP10.25□□□□□ -0.77
SSR1-210ENST00000489567 NBPF15Q8N660 670 aa10.25□□□□□ -0.77
SSR1-210ENST00000489567 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
SSR1-210ENST00000489567 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
SSR1-210ENST00000489567 SRP68Q9UHB9 627 aaKnown RBP10.25□□□□□ -0.77
SSR1-210ENST00000489567 C4AP0C0L4 1744 aa10.25□□□□□ -0.77
SSR1-210ENST00000489567 EIF5P55010 431 aaKnown RBP10.25□□□□□ -0.77
SSR1-210ENST00000489567 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
SSR1-210ENST00000489567 RFC4P35249 363 aa10.24□□□□□ -0.77
SSR1-210ENST00000489567 GNAI1P63096 354 aa10.24□□□□□ -0.77
SSR1-210ENST00000489567 TSR2Q969E8 191 aaKnown RBP10.24□□□□□ -0.77
SSR1-210ENST00000489567 COL15A1P39059 1388 aa10.24□□□□□ -0.77
SSR1-210ENST00000489567 LAMB4A4D0S4 1761 aa10.24□□□□□ -0.77
SSR1-210ENST00000489567 GYS1P13807 737 aa10.23□□□□□ -0.77
SSR1-210ENST00000489567 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
SSR1-210ENST00000489567 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
SSR1-210ENST00000489567 ZNF521Q96K83 1311 aa10.23□□□□□ -0.77
SSR1-210ENST00000489567 USP42Q9H9J4 1324 aaKnown RBP10.23□□□□□ -0.77
SSR1-210ENST00000489567 COL24A1Q17RW2 1714 aa10.23□□□□□ -0.77
SSR1-210ENST00000489567 IL6STP40189 918 aaPredicted RBP10.23□□□□□ -0.77
SSR1-210ENST00000489567 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
SSR1-210ENST00000489567 BCL2L12Q9HB09 334 aa10.23□□□□□ -0.77
SSR1-210ENST00000489567 IL16Q14005 1332 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 ELL2O00472 640 aaPredicted RBP10.22□□□□□ -0.77
SSR1-210ENST00000489567 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
SSR1-210ENST00000489567 FKBP8Q14318 412 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 DUSP27Q5VZP5 1158 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 USPL1Q5W0Q7 1092 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 WDR63Q8IWG1 891 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 C8orf58Q8NAV2 365 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
SSR1-210ENST00000489567 ANXA1P04083 346 aa10.21□□□□□ -0.77
SSR1-210ENST00000489567 PDIA6Q15084 440 aa10.21□□□□□ -0.77
SSR1-210ENST00000489567 PROSER3Q2NL68 480 aa10.21□□□□□ -0.77
SSR1-210ENST00000489567 TSPYL6Q8N831 410 aa10.21□□□□□ -0.77
SSR1-210ENST00000489567 NARFQ9UHQ1 456 aa10.21□□□□□ -0.77
SSR1-210ENST00000489567 FANCIQ9NVI1 1328 aa10.21□□□□□ -0.78
SSR1-210ENST00000489567 MYL6BP14649 208 aa10.21□□□□□ -0.78
SSR1-210ENST00000489567 LRP10Q7Z4F1 713 aa10.21□□□□□ -0.78
SSR1-210ENST00000489567 HOMEZQ8IX15 550 aa10.21□□□□□ -0.78
SSR1-210ENST00000489567 NGEFQ8N5V2 710 aa10.21□□□□□ -0.78
SSR1-210ENST00000489567 ZPR1O75312 459 aa10.2□□□□□ -0.78
SSR1-210ENST00000489567 CAMTA2O94983 1202 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 MMP10P09238 476 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 POLD1P28340 1107 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 DZIP3Q86Y13 1208 aaKnown RBP10.19□□□□□ -0.78
SSR1-210ENST00000489567 NLGN1Q8N2Q7 840 aa10.19□□□□□ -0.78
SSR1-210ENST00000489567 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms