RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 IFT57Q9NWB7 429 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 ABCA3Q99758 1704 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 NRKQ7Z2Y5 1582 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 FAM83GA6ND36 823 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 BRPF1P55201 1214 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-208ENST00000489537 ABTB2Q8N961 1025 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 GAS2L2Q8NHY3 880 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 SLC4A5Q9BY07 1137 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 BABAM1Q9NWV8 329 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 EMILIN1Q9Y6C2 1016 aa8.15□□□□□ -1.1
SF3A3-208ENST00000489537 TNS3Q68CZ2 1445 aa8.14□□□□□ -1.11
SF3A3-208ENST00000489537 GOLGA8CPA6NN73 597 aa8.14□□□□□ -1.11
SF3A3-208ENST00000489537 TCERG1O14776 1098 aaKnown RBP8.14□□□□□ -1.11
SF3A3-208ENST00000489537 CENPQQ7L2Z9 268 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-208ENST00000489537 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-208ENST00000489537 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
SF3A3-208ENST00000489537 VPS9D1Q9Y2B5 631 aa8.14□□□□□ -1.11
SF3A3-208ENST00000489537 KIF1AQ12756 1690 aa8.14□□□□□ -1.11
SF3A3-208ENST00000489537 USP54Q70EL1 1684 aa8.14□□□□□ -1.11
SF3A3-208ENST00000489537 BRWD3Q6RI45 1802 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
SF3A3-208ENST00000489537 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-208ENST00000489537 ZKSCAN2Q63HK3 967 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 UNC5CLQ8IV45 518 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 FBXW7Q969H0 707 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 KCTD12Q96CX2 325 aaKnown RBP8.13□□□□□ -1.11
SF3A3-208ENST00000489537 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 ALS2Q96Q42 1657 aa8.13□□□□□ -1.11
SF3A3-208ENST00000489537 CRYBG1Q9Y4K1 1723 aa8.12□□□□□ -1.11
SF3A3-208ENST00000489537 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
SF3A3-208ENST00000489537 RRS1Q15050 365 aaKnown RBP8.12□□□□□ -1.11
SF3A3-208ENST00000489537 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
SF3A3-208ENST00000489537 ARHGAP45Q92619 1136 aa8.12□□□□□ -1.11
SF3A3-208ENST00000489537 NBPF3Q9H094 633 aa8.12□□□□□ -1.11
SF3A3-208ENST00000489537 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.12□□□□□ -1.11
SF3A3-208ENST00000489537 PLCH1Q4KWH8 1693 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 KDRP35968 1356 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 MAP3K19Q56UN5 1328 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 MAP2P11137 1827 aaKnown RBP8.11□□□□□ -1.11
SF3A3-208ENST00000489537 B4GALNT3Q6L9W6 998 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 LMOD2Q6P5Q4 547 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 FTSJ3Q8IY81 847 aaKnown RBP8.11□□□□□ -1.11
SF3A3-208ENST00000489537 IP6K1Q92551 441 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 ADAM33Q9BZ11 813 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 DDX19BQ9UMR2 479 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 RRP7AQ9Y3A4 280 aaKnown RBP8.11□□□□□ -1.11
SF3A3-208ENST00000489537 NRAPQ86VF7 1730 aa8.11□□□□□ -1.11
SF3A3-208ENST00000489537 PHF14O94880 888 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 CAMK2BQ13554 666 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 AMOTQ4VCS5 1084 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 NUTM2GQ5VZR2 741 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 SULT6B1Q6IMI4 303 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 DEFB132Q7Z7B7 95 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
SF3A3-208ENST00000489537 EXOC6Q8TAG9 804 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 ZBED2Q9BTP6 218 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 SMC4Q9NTJ3 1288 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
SF3A3-208ENST00000489537 PPP1R3GB7ZBB8 358 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-208ENST00000489537 EIF5BO60841 1220 aaKnown RBP8.09□□□□□ -1.11
SF3A3-208ENST00000489537 HMOX1P09601 288 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 ZNF853P0CG23 659 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 HOXC9P31274 260 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 VPS72Q15906 364 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 DZIP1LQ8IYY4 767 aaKnown RBP8.09□□□□□ -1.11
SF3A3-208ENST00000489537 EPAS1Q99814 870 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 API5Q9BZZ5 524 aaKnown RBP8.09□□□□□ -1.11
SF3A3-208ENST00000489537 RWDD1Q9H446 243 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-208ENST00000489537 PLA2G2EQ9NZK7 142 aa8.09□□□□□ -1.11
SF3A3-208ENST00000489537 DPYSL4O14531 572 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 EXOSC9Q06265 439 aaKnown RBP8.08□□□□□ -1.12
SF3A3-208ENST00000489537 CHRNA2Q15822 529 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 HSP90AB2PQ58FF8 381 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 ATF7IPQ6VMQ6 1270 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 CLUAP1Q96AJ1 413 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 CRBNQ96SW2 442 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 RTN4Q9NQC3 1192 aaKnown RBP8.08□□□□□ -1.12
SF3A3-208ENST00000489537 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 PCDHGA10Q9Y5H3 936 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 ABCC6O95255 1503 aa8.08□□□□□ -1.12
SF3A3-208ENST00000489537 USP19O94966 1318 aa8.07□□□□□ -1.12
SF3A3-208ENST00000489537 FRAT1Q92837 279 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-208ENST00000489537 BTG4Q9NY30 223 aa8.07□□□□□ -1.12
SF3A3-208ENST00000489537 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 PIK3C2AO00443 1686 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 CHL1O00533 1208 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 PLIN1O60240 522 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 BCAR3O75815 825 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 GCP02774 474 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 PTPN5P54829 565 aa8.06□□□□□ -1.12
SF3A3-208ENST00000489537 MVPQ14764 893 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms