RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SRP68Q9UHB9 627 aaKnown RBP21.06■□□□□ 0.96
CTDSP1-209ENST00000488627 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
CTDSP1-209ENST00000488627 UBR2Q8IWV8 1755 aa21.05■□□□□ 0.96
CTDSP1-209ENST00000488627 MMP10P09238 476 aa21.05■□□□□ 0.96
CTDSP1-209ENST00000488627 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
CTDSP1-209ENST00000488627 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
CTDSP1-209ENST00000488627 VIRMAQ69YN4 1812 aaKnown RBP21.05■□□□□ 0.96
CTDSP1-209ENST00000488627 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
CTDSP1-209ENST00000488627 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
CTDSP1-209ENST00000488627 KLHL34Q8N239 644 aa21.04■□□□□ 0.96
CTDSP1-209ENST00000488627 RRP7AQ9Y3A4 280 aaKnown RBP21.04■□□□□ 0.96
CTDSP1-209ENST00000488627 A1BGP04217 495 aa21.03■□□□□ 0.96
CTDSP1-209ENST00000488627 SNRPA1P09661 255 aaKnown RBP21.03■□□□□ 0.96
CTDSP1-209ENST00000488627 CANXP27824 592 aaKnown RBP21.03■□□□□ 0.96
CTDSP1-209ENST00000488627 PNISRQ8TF01 805 aaKnown RBP21.03■□□□□ 0.96
CTDSP1-209ENST00000488627 CD2APQ9Y5K6 639 aa21.03■□□□□ 0.96
CTDSP1-209ENST00000488627 FKBP8Q14318 412 aa21.02■□□□□ 0.96
CTDSP1-209ENST00000488627 TRIM35Q9UPQ4 493 aa21.02■□□□□ 0.96
CTDSP1-209ENST00000488627 NARFQ9UHQ1 456 aa21.01■□□□□ 0.95
CTDSP1-209ENST00000488627 COL15A1P39059 1388 aa21■□□□□ 0.95
CTDSP1-209ENST00000488627 ANP32CO43423 234 aa21■□□□□ 0.95
CTDSP1-209ENST00000488627 EIF4A1P60842 406 aaKnown RBP21■□□□□ 0.95
CTDSP1-209ENST00000488627 NEUROD2Q15784 382 aa21■□□□□ 0.95
CTDSP1-209ENST00000488627 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
CTDSP1-209ENST00000488627 BCL2L12Q9HB09 334 aa21■□□□□ 0.95
CTDSP1-209ENST00000488627 TM4SF1P30408 202 aa20.99■□□□□ 0.95
CTDSP1-209ENST00000488627 IL6STP40189 918 aaPredicted RBP20.99■□□□□ 0.95
CTDSP1-209ENST00000488627 LMOD3Q0VAK6 560 aa20.99■□□□□ 0.95
CTDSP1-209ENST00000488627 ZPR1O75312 459 aa20.98■□□□□ 0.95
CTDSP1-209ENST00000488627 GIGYF1O75420 1035 aaPredicted RBP20.97■□□□□ 0.95
CTDSP1-209ENST00000488627 DDR1Q08345 913 aa20.97■□□□□ 0.95
CTDSP1-209ENST00000488627 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
CTDSP1-209ENST00000488627 A0A087WZG4 1122 aa20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 NBPF26B4DH59 902 aa20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 NBPF10Q6P3W6 841 aaKnown RBP20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 NBPF15Q8N660 670 aa20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
CTDSP1-209ENST00000488627 APAF1O14727 1248 aa20.95■□□□□ 0.94
CTDSP1-209ENST00000488627 POLRMTO00411 1230 aaKnown RBP20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 CHL1O00533 1208 aa20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 NFIXQ14938 502 aa20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 TSPYL4Q9UJ04 414 aa20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 TBC1D2BQ9UPU7 963 aa20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 PARP3Q9Y6F1 533 aa20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 C4AP0C0L4 1744 aa20.94■□□□□ 0.94
CTDSP1-209ENST00000488627 GPR162Q16538 588 aa20.92■□□□□ 0.94
CTDSP1-209ENST00000488627 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
CTDSP1-209ENST00000488627 ZNF330Q9Y3S2 320 aaPredicted RBP20.92■□□□□ 0.94
CTDSP1-209ENST00000488627 UTRNP46939 3433 aa20.92■□□□□ 0.94
CTDSP1-209ENST00000488627 CAMTA2O94983 1202 aa20.91■□□□□ 0.94
CTDSP1-209ENST00000488627 YBX3P16989 372 aaKnown RBP eCLIP20.91■□□□□ 0.941e-6■□□□□ 10.2
CTDSP1-209ENST00000488627 C10orf71Q711Q0 1435 aa20.9■□□□□ 0.94
CTDSP1-209ENST00000488627 TGFB2P61812 414 aa20.89■□□□□ 0.93
CTDSP1-209ENST00000488627 DZIP3Q86Y13 1208 aaKnown RBP20.89■□□□□ 0.93
CTDSP1-209ENST00000488627 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
CTDSP1-209ENST00000488627 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
CTDSP1-209ENST00000488627 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
CTDSP1-209ENST00000488627 ZNF853P0CG23 659 aa20.87■□□□□ 0.93
CTDSP1-209ENST00000488627 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
CTDSP1-209ENST00000488627 CFAP44Q96MT7 982 aa20.87■□□□□ 0.93
CTDSP1-209ENST00000488627 PXDNLA1KZ92 1463 aa20.87■□□□□ 0.93
CTDSP1-209ENST00000488627 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
CTDSP1-209ENST00000488627 SERPINB2P05120 415 aa20.86■□□□□ 0.93
CTDSP1-209ENST00000488627 KCNA3P22001 575 aa20.86■□□□□ 0.93
CTDSP1-209ENST00000488627 BICDL1Q6ZP65 573 aa20.86■□□□□ 0.93
CTDSP1-209ENST00000488627 NPM2Q86SE8 214 aaKnown RBP20.86■□□□□ 0.93
CTDSP1-209ENST00000488627 DPEP1P16444 411 aa20.85■□□□□ 0.93
CTDSP1-209ENST00000488627 PDIA6Q15084 440 aa20.85■□□□□ 0.93
CTDSP1-209ENST00000488627 KRT24Q2M2I5 525 aa20.85■□□□□ 0.93
CTDSP1-209ENST00000488627 LRP10Q7Z4F1 713 aa20.85■□□□□ 0.93
CTDSP1-209ENST00000488627 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
CTDSP1-209ENST00000488627 CLEC4GQ6UXB4 293 aa20.84■□□□□ 0.93
CTDSP1-209ENST00000488627 RGL2O15211 777 aa20.83■□□□□ 0.93
CTDSP1-209ENST00000488627 GRIN3BO60391 1043 aa20.83■□□□□ 0.93
CTDSP1-209ENST00000488627 YY1P25490 414 aa20.83■□□□□ 0.93
CTDSP1-209ENST00000488627 WWC3Q9ULE0 1092 aa20.83■□□□□ 0.93
CTDSP1-209ENST00000488627 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
CTDSP1-209ENST00000488627 EIF2S2P20042 333 aaKnown RBP20.82■□□□□ 0.92
CTDSP1-209ENST00000488627 MBIPQ9NS73 344 aa20.82■□□□□ 0.92
CTDSP1-209ENST00000488627 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
CTDSP1-209ENST00000488627 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 MYL6BP14649 208 aa20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 HLFQ16534 295 aa20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 CCDC27Q2M243 656 aa20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 TTLL7Q6ZT98 887 aa20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
CTDSP1-209ENST00000488627 PROSER3Q2NL68 480 aa20.8■□□□□ 0.92
CTDSP1-209ENST00000488627 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
CTDSP1-209ENST00000488627 KIF13BQ9NQT8 1826 aa20.79■□□□□ 0.92
CTDSP1-209ENST00000488627 ERVV-1B6SEH8 477 aa20.79■□□□□ 0.92
CTDSP1-209ENST00000488627 CHRNA5P30532 468 aa20.79■□□□□ 0.92
CTDSP1-209ENST00000488627 CALD1Q05682 793 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-209ENST00000488627 WWC1Q8IX03 1113 aa20.79■□□□□ 0.92
CTDSP1-209ENST00000488627 CARMIL3Q8ND23 1372 aa20.78■□□□□ 0.92
CTDSP1-209ENST00000488627 GNAI1P63096 354 aa20.78■□□□□ 0.92
CTDSP1-209ENST00000488627 PRR5LQ6MZQ0 368 aa20.78■□□□□ 0.92
CTDSP1-209ENST00000488627 ZNF652Q9Y2D9 606 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms