RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
APTX-228ENST00000486724 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
APTX-228ENST00000486724 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
APTX-228ENST00000486724 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
APTX-228ENST00000486724 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
APTX-228ENST00000486724 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
APTX-228ENST00000486724 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
APTX-228ENST00000486724 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
APTX-228ENST00000486724 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
APTX-228ENST00000486724 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
APTX-228ENST00000486724 CASP8AP2Q9UKL3 1982 aa11.86□□□□□ -0.51
APTX-228ENST00000486724 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
APTX-228ENST00000486724 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
APTX-228ENST00000486724 GRM1Q13255 1194 aa11.85□□□□□ -0.51
APTX-228ENST00000486724 COG3Q96JB2 828 aa11.85□□□□□ -0.51
APTX-228ENST00000486724 AFDNP55196 1824 aaKnown RBP11.85□□□□□ -0.51
APTX-228ENST00000486724 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
APTX-228ENST00000486724 NRXN2Q9P2S2 1712 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 TM4SF1P30408 202 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 MAP2K2P36507 400 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 CYP4F22Q6NT55 531 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 SLC4A9Q96Q91 983 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
APTX-228ENST00000486724 TERF2IPQ9NYB0 399 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
APTX-228ENST00000486724 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
APTX-228ENST00000486724 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
APTX-228ENST00000486724 TAOK3Q9H2K8 898 aa11.83□□□□□ -0.52
APTX-228ENST00000486724 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
APTX-228ENST00000486724 H0YIN7 160 aa11.82□□□□□ -0.52
APTX-228ENST00000486724 FBLN1P23142 703 aa11.82□□□□□ -0.52
APTX-228ENST00000486724 MAP1SQ66K74 1059 aaPredicted RBP11.82□□□□□ -0.52
APTX-228ENST00000486724 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
APTX-228ENST00000486724 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
APTX-228ENST00000486724 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
APTX-228ENST00000486724 HACL1Q9UJ83 578 aa11.82□□□□□ -0.52
APTX-228ENST00000486724 INSRP06213 1382 aa11.81□□□□□ -0.52
APTX-228ENST00000486724 C21orf2O43822 256 aa11.81□□□□□ -0.52
APTX-228ENST00000486724 EPHX2P34913 555 aa11.81□□□□□ -0.52
APTX-228ENST00000486724 RRS1Q15050 365 aaKnown RBP11.81□□□□□ -0.52
APTX-228ENST00000486724 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
APTX-228ENST00000486724 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
APTX-228ENST00000486724 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
APTX-228ENST00000486724 AOC2O75106 756 aa11.8□□□□□ -0.52
APTX-228ENST00000486724 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
APTX-228ENST00000486724 ZPR1O75312 459 aa11.79□□□□□ -0.52
APTX-228ENST00000486724 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
APTX-228ENST00000486724 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
APTX-228ENST00000486724 PHKG2P15735 406 aa11.78□□□□□ -0.52
APTX-228ENST00000486724 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
APTX-228ENST00000486724 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
APTX-228ENST00000486724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.521e-6■□□□□ 10.8
APTX-228ENST00000486724 FLT4P35916 1363 aa11.78□□□□□ -0.52
APTX-228ENST00000486724 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
APTX-228ENST00000486724 TRPM7Q96QT4 1865 aa11.77□□□□□ -0.53
APTX-228ENST00000486724 NFIXQ14938 502 aa11.77□□□□□ -0.53
APTX-228ENST00000486724 USPL1Q5W0Q7 1092 aa11.77□□□□□ -0.53
APTX-228ENST00000486724 ZNF622Q969S3 477 aaKnown RBP eCLIP11.77□□□□□ -0.53
APTX-228ENST00000486724 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
APTX-228ENST00000486724 KIF24Q5T7B8 1368 aa11.77□□□□□ -0.53
APTX-228ENST00000486724 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
APTX-228ENST00000486724 SERPINB2P05120 415 aa11.76□□□□□ -0.53
APTX-228ENST00000486724 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
APTX-228ENST00000486724 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
APTX-228ENST00000486724 TJP1Q07157 1748 aa11.76□□□□□ -0.53
APTX-228ENST00000486724 RNF123Q5XPI4 1314 aa11.76□□□□□ -0.53
APTX-228ENST00000486724 ZNF541Q9H0D2 1346 aa11.76□□□□□ -0.53
APTX-228ENST00000486724 ROCK2O75116 1388 aaKnown RBP11.76□□□□□ -0.53
APTX-228ENST00000486724 DLL1O00548 723 aa11.75□□□□□ -0.53
APTX-228ENST00000486724 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
APTX-228ENST00000486724 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
APTX-228ENST00000486724 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
APTX-228ENST00000486724 A0A0C4DFX4 3053 aa11.74□□□□□ -0.53
APTX-228ENST00000486724 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
APTX-228ENST00000486724 PDE6BP35913 854 aa11.73□□□□□ -0.53
APTX-228ENST00000486724 FXR1P51114 621 aaKnown RBP eCLIP11.73□□□□□ -0.53
APTX-228ENST00000486724 FMR1Q06787 632 aaKnown RBP eCLIP11.73□□□□□ -0.53
APTX-228ENST00000486724 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
APTX-228ENST00000486724 CST9Q5W186 159 aa11.73□□□□□ -0.53
APTX-228ENST00000486724 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
APTX-228ENST00000486724 ARFGEF2Q9Y6D5 1785 aa11.73□□□□□ -0.53
APTX-228ENST00000486724 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
APTX-228ENST00000486724 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
APTX-228ENST00000486724 SAPCD2Q86UD0 394 aa11.72□□□□□ -0.53
APTX-228ENST00000486724 HHIPL1Q96JK4 782 aa11.72□□□□□ -0.53
APTX-228ENST00000486724 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
APTX-228ENST00000486724 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
APTX-228ENST00000486724 PRPF40BQ6NWY9 871 aaKnown RBP11.71□□□□□ -0.53
APTX-228ENST00000486724 GPC2Q8N158 579 aa11.71□□□□□ -0.53
APTX-228ENST00000486724 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.53
APTX-228ENST00000486724 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
APTX-228ENST00000486724 ANKRD26Q9UPS8 1709 aa11.71□□□□□ -0.54
APTX-228ENST00000486724 COL15A1P39059 1388 aa11.7□□□□□ -0.54
APTX-228ENST00000486724 SZT2Q5T011 3432 aa11.7□□□□□ -0.54
APTX-228ENST00000486724 TRAF5O00463 557 aa11.7□□□□□ -0.54
APTX-228ENST00000486724 CNKSR1Q969H4 720 aa11.7□□□□□ -0.54
APTX-228ENST00000486724 HSP90AB1P08238 724 aaKnown RBP11.69□□□□□ -0.54
APTX-228ENST00000486724 CABP4P57796 275 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms