RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 COL9A3Q14050 684 aaPredicted RBP7.04□□□□□ -1.28
COMMD6-211ENST00000486516 SKIV2LQ15477 1246 aaKnown RBP7.04□□□□□ -1.28
COMMD6-211ENST00000486516 FIGNL1Q6PIW4 674 aa7.04□□□□□ -1.28
COMMD6-211ENST00000486516 CCDC125Q86Z20 511 aa7.04□□□□□ -1.28
COMMD6-211ENST00000486516 KHNYNO15037 678 aaKnown RBP7.03□□□□□ -1.28
COMMD6-211ENST00000486516 ATP4AP20648 1035 aa7.03□□□□□ -1.28
COMMD6-211ENST00000486516 GTF2E1P29083 439 aaPredicted RBP7.03□□□□□ -1.28
COMMD6-211ENST00000486516 RHBDD1Q8TEB9 315 aa7.03□□□□□ -1.28
COMMD6-211ENST00000486516 CDCA7Q9BWT1 371 aaPredicted RBP7.03□□□□□ -1.28
COMMD6-211ENST00000486516 FAM182BQ5T319 152 aa7.02□□□□□ -1.29
COMMD6-211ENST00000486516 ZNF468Q5VIY5 522 aaPredicted RBP7.02□□□□□ -1.29
COMMD6-211ENST00000486516 C8orf86Q6ZUL3 223 aa7.02□□□□□ -1.29
COMMD6-211ENST00000486516 AVENQ9NQS1 362 aaPredicted RBP7.02□□□□□ -1.29
COMMD6-211ENST00000486516 SPDYE3A6NKU9 549 aa7.01□□□□□ -1.29
COMMD6-211ENST00000486516 H2AFB1P0C5Y9 115 aa7.01□□□□□ -1.29
COMMD6-211ENST00000486516 H2AFB2P0C5Z0 115 aa7.01□□□□□ -1.29
COMMD6-211ENST00000486516 TBC1D9Q6ZT07 1266 aa7.01□□□□□ -1.29
COMMD6-211ENST00000486516 STRN4Q9NRL3 753 aa7.01□□□□□ -1.29
COMMD6-211ENST00000486516 ELOA3CA0A087WX78 387 aaPredicted RBP7□□□□□ -1.29
COMMD6-211ENST00000486516 ELOA3DA6NLF2 546 aaPredicted RBP7□□□□□ -1.29
COMMD6-211ENST00000486516 ELOA3BQ3SY89 546 aa7□□□□□ -1.29
COMMD6-211ENST00000486516 NLRP8Q86W28 1048 aa7□□□□□ -1.29
COMMD6-211ENST00000486516 PPARGC1BQ86YN6 1023 aaKnown RBP7□□□□□ -1.29
COMMD6-211ENST00000486516 ELOA3Q8NG57 546 aa7□□□□□ -1.29
COMMD6-211ENST00000486516 PRR12Q9ULL5 1215 aa7□□□□□ -1.29
COMMD6-211ENST00000486516 M0R082 166 aa6.99□□□□□ -1.29
COMMD6-211ENST00000486516 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
COMMD6-211ENST00000486516 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
COMMD6-211ENST00000486516 ZNF417Q8TAU3 575 aa6.99□□□□□ -1.29
COMMD6-211ENST00000486516 ZNF587Q96SQ5 575 aaPredicted RBP6.99□□□□□ -1.29
COMMD6-211ENST00000486516 MDFIQ99750 246 aa6.99□□□□□ -1.29
COMMD6-211ENST00000486516 A0A1W2PNR3 127 aa6.98□□□□□ -1.29
COMMD6-211ENST00000486516 TLR1Q15399 786 aa6.98□□□□□ -1.29
COMMD6-211ENST00000486516 AIDAQ96BJ3 306 aa6.98□□□□□ -1.29
COMMD6-211ENST00000486516 CCDC85AQ96PX6 553 aaPredicted RBP6.98□□□□□ -1.29
COMMD6-211ENST00000486516 NACC1Q96RE7 527 aa6.98□□□□□ -1.29
COMMD6-211ENST00000486516 ETNK1Q9HBU6 452 aa6.98□□□□□ -1.29
COMMD6-211ENST00000486516 STARD13Q9Y3M8 1113 aa6.98□□□□□ -1.29
COMMD6-211ENST00000486516 MBTPS1Q14703 1052 aa6.97□□□□□ -1.29
COMMD6-211ENST00000486516 SLC24A3Q9HC58 644 aa6.97□□□□□ -1.29
COMMD6-211ENST00000486516 MYCP01106 439 aaPredicted RBP6.96□□□□□ -1.3
COMMD6-211ENST00000486516 ALBP02768 609 aa6.96□□□□□ -1.3
COMMD6-211ENST00000486516 SELPP16109 830 aa6.96□□□□□ -1.3
COMMD6-211ENST00000486516 ADGRE1Q14246 886 aa6.96□□□□□ -1.3
COMMD6-211ENST00000486516 SYT9Q86SS6 491 aa6.96□□□□□ -1.3
COMMD6-211ENST00000486516 PAX4O43316 350 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 NID1P14543 1247 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 ALAS2P22557 587 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 RFC5P40937 340 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 ESCO1Q5FWF5 840 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
COMMD6-211ENST00000486516 TP53INP1Q96A56 240 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
COMMD6-211ENST00000486516 COL17A1Q9UMD9 1497 aaPredicted RBP6.94□□□□□ -1.3
COMMD6-211ENST00000486516 FAM157BP0CG42 384 aa6.94□□□□□ -1.3
COMMD6-211ENST00000486516 ELNP15502 786 aa6.94□□□□□ -1.3
COMMD6-211ENST00000486516 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
COMMD6-211ENST00000486516 VSIG10Q8N0Z9 540 aa6.94□□□□□ -1.3
COMMD6-211ENST00000486516 GJD4Q96KN9 370 aaPredicted RBP6.94□□□□□ -1.3
COMMD6-211ENST00000486516 TXKP42681 527 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 NR1H3Q13133 447 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 TSGA10IPQ3SY00 556 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 TXNRD3Q86VQ6 643 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 MICALL1Q8N3F8 863 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 FMNL2Q96PY5 1086 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
COMMD6-211ENST00000486516 C9orf172C9J069 976 aa6.92□□□□□ -1.3
COMMD6-211ENST00000486516 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
COMMD6-211ENST00000486516 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
COMMD6-211ENST00000486516 PRDM6Q9NQX0 595 aa6.92□□□□□ -1.3
COMMD6-211ENST00000486516 ARID1BQ8NFD5 2236 aaPredicted RBP6.91□□□□□ -1.3
COMMD6-211ENST00000486516 EFSO43281 561 aa6.91□□□□□ -1.3
COMMD6-211ENST00000486516 NRG1Q02297 640 aaPredicted RBP6.91□□□□□ -1.3
COMMD6-211ENST00000486516 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
COMMD6-211ENST00000486516 TRAPPC3LQ5T215 181 aa6.9□□□□□ -1.3
COMMD6-211ENST00000486516 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
COMMD6-211ENST00000486516 FAM117AQ9C073 453 aa6.9□□□□□ -1.3
COMMD6-211ENST00000486516 RNF112Q9ULX5 631 aa6.9□□□□□ -1.3
COMMD6-211ENST00000486516 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
COMMD6-211ENST00000486516 NIFKQ9BYG3 293 aaKnown RBP6.89□□□□□ -1.31
COMMD6-211ENST00000486516 KRTAP4-2Q9BYR5 136 aa6.89□□□□□ -1.31
COMMD6-211ENST00000486516 USP3Q9Y6I4 520 aa6.89□□□□□ -1.31
COMMD6-211ENST00000486516 A0A0A0MRY4 1105 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 SIN3BO75182 1162 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 SCNN1DP51172 638 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 FZD5Q13467 585 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 ZNF295-AS1Q8N0V1 137 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 SLC30A3Q99726 388 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 GJA3Q9Y6H8 435 aa6.88□□□□□ -1.31
COMMD6-211ENST00000486516 GPR37L1O60883 481 aa6.87□□□□□ -1.31
COMMD6-211ENST00000486516 C20orf204Q6ZNR8 217 aa6.87□□□□□ -1.31
COMMD6-211ENST00000486516 LENG1Q96BZ8 264 aaPredicted RBP6.87□□□□□ -1.31
COMMD6-211ENST00000486516 PCMTD2Q9NV79 361 aa6.87□□□□□ -1.31
COMMD6-211ENST00000486516 CEP126Q9P2H0 1117 aa6.87□□□□□ -1.31
COMMD6-211ENST00000486516 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
COMMD6-211ENST00000486516 ADH7P40394 386 aa6.86□□□□□ -1.31
COMMD6-211ENST00000486516 NBPF1Q3BBV0 1214 aa6.86□□□□□ -1.31
COMMD6-211ENST00000486516 SAMD5Q5TGI4 173 aa6.86□□□□□ -1.31
COMMD6-211ENST00000486516 RAB44Q7Z6P3 723 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms