RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 TSR2Q969E8 191 aaKnown RBP30.71■■■□□ 2.51
ABCF3-216ENST00000485921 PNPLA7Q6ZV29 1317 aa30.71■■■□□ 2.51
ABCF3-216ENST00000485921 RPS6KA4O75676 772 aa30.7■■■□□ 2.51
ABCF3-216ENST00000485921 HNRNPUQ00839 825 aaKnown RBP eCLIP30.7■■■□□ 2.51
ABCF3-216ENST00000485921 AMIGO3Q86WK7 504 aa30.7■■■□□ 2.51
ABCF3-216ENST00000485921 RTCBQ9Y3I0 505 aaKnown RBP30.7■■■□□ 2.51
ABCF3-216ENST00000485921 MYH14Q7Z406 1995 aaKnown RBP30.7■■■□□ 2.5
ABCF3-216ENST00000485921 SMIM5Q71RC9 77 aa30.69■■■□□ 2.5
ABCF3-216ENST00000485921 SPINK5Q9NQ38 1064 aaPredicted RBP30.69■■■□□ 2.5
ABCF3-216ENST00000485921 PHF14O94880 888 aa30.68■■■□□ 2.5
ABCF3-216ENST00000485921 ZBTB1Q9Y2K1 713 aa30.68■■■□□ 2.5
ABCF3-216ENST00000485921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.67■■■□□ 2.5
ABCF3-216ENST00000485921 A1BGP04217 495 aa30.67■■■□□ 2.5
ABCF3-216ENST00000485921 SSFA2P28290 1259 aa30.67■■■□□ 2.5
ABCF3-216ENST00000485921 FLAD1Q8NFF5 587 aa30.67■■■□□ 2.5
ABCF3-216ENST00000485921 PDGFDQ9GZP0 370 aaPredicted RBP30.67■■■□□ 2.5
ABCF3-216ENST00000485921 TUBGCP6Q96RT7 1819 aa30.67■■■□□ 2.5
ABCF3-216ENST00000485921 UBR3Q6ZT12 1888 aa30.66■■■□□ 2.5
ABCF3-216ENST00000485921 CANXP27824 592 aaKnown RBP30.66■■■□□ 2.5
ABCF3-216ENST00000485921 GOLGA2Q08379 1002 aa30.66■■■□□ 2.5
ABCF3-216ENST00000485921 COL23A1Q86Y22 540 aaPredicted RBP30.66■■■□□ 2.5
ABCF3-216ENST00000485921 MYH16Q9H6N6 1097 aa30.65■■■□□ 2.5
ABCF3-216ENST00000485921 FANCIQ9NVI1 1328 aa30.65■■■□□ 2.5
ABCF3-216ENST00000485921 QSER1Q2KHR3 1735 aa30.64■■■□□ 2.5
ABCF3-216ENST00000485921 MSH5O43196 834 aa30.64■■■□□ 2.5
ABCF3-216ENST00000485921 TRAPPC3LQ5T215 181 aa30.64■■■□□ 2.5
ABCF3-216ENST00000485921 DUSP27Q5VZP5 1158 aa30.64■■■□□ 2.5
ABCF3-216ENST00000485921 EIF2S2P20042 333 aaKnown RBP30.63■■■□□ 2.49
ABCF3-216ENST00000485921 C8orf58Q8NAV2 365 aa30.63■■■□□ 2.49
ABCF3-216ENST00000485921 SOS1Q07889 1333 aaPredicted RBP30.63■■■□□ 2.49
ABCF3-216ENST00000485921 HOXB7P09629 217 aa30.62■■■□□ 2.49
ABCF3-216ENST00000485921 ADRA2BP18089 450 aa30.62■■■□□ 2.49
ABCF3-216ENST00000485921 LAMB4A4D0S4 1761 aa30.61■■■□□ 2.49
ABCF3-216ENST00000485921 ELL2O00472 640 aaPredicted RBP30.61■■■□□ 2.49
ABCF3-216ENST00000485921 PIP4K2AP48426 406 aaPredicted RBP30.61■■■□□ 2.49
ABCF3-216ENST00000485921 E9PSI1 815 aa30.6■■■□□ 2.49
ABCF3-216ENST00000485921 ARHGEF1Q92888 912 aaKnown RBP30.6■■■□□ 2.49
ABCF3-216ENST00000485921 NBPF26B4DH59 902 aa30.59■■■□□ 2.49
ABCF3-216ENST00000485921 IL6STP40189 918 aaPredicted RBP30.59■■■□□ 2.49
ABCF3-216ENST00000485921 EIF5P55010 431 aaKnown RBP30.59■■■□□ 2.49
ABCF3-216ENST00000485921 NBPF10Q6P3W6 841 aaKnown RBP30.59■■■□□ 2.49
ABCF3-216ENST00000485921 NBPF15Q8N660 670 aa30.59■■■□□ 2.49
ABCF3-216ENST00000485921 CDCA7LQ96GN5 454 aa30.59■■■□□ 2.49
ABCF3-216ENST00000485921 CASZ1Q86V15 1759 aa30.59■■■□□ 2.49
ABCF3-216ENST00000485921 RFC4P35249 363 aa30.58■■■□□ 2.49
ABCF3-216ENST00000485921 SLFN5Q08AF3 891 aa30.58■■■□□ 2.49
ABCF3-216ENST00000485921 TSPYL6Q8N831 410 aa30.58■■■□□ 2.49
ABCF3-216ENST00000485921 NECTIN2Q92692 538 aa30.58■■■□□ 2.49
ABCF3-216ENST00000485921 ZNF330Q9Y3S2 320 aaPredicted RBP30.58■■■□□ 2.49
ABCF3-216ENST00000485921 SLC16A10Q8TF71 515 aa30.57■■■□□ 2.48
ABCF3-216ENST00000485921 COL15A1P39059 1388 aa30.56■■■□□ 2.48
ABCF3-216ENST00000485921 EXOSC9Q06265 439 aaKnown RBP30.56■■■□□ 2.48
ABCF3-216ENST00000485921 HDGFL1Q5TGJ6 251 aa30.56■■■□□ 2.48
ABCF3-216ENST00000485921 ERBB4Q15303 1308 aa30.55■■■□□ 2.48
ABCF3-216ENST00000485921 ZBTB7AO95365 584 aa30.55■■■□□ 2.48
ABCF3-216ENST00000485921 NPM2Q86SE8 214 aaKnown RBP30.55■■■□□ 2.48
ABCF3-216ENST00000485921 A0A087WZG4 1122 aa30.54■■■□□ 2.48
ABCF3-216ENST00000485921 TWISTNBQ3B726 338 aaPredicted RBP30.54■■■□□ 2.48
ABCF3-216ENST00000485921 MYL6BP14649 208 aa30.52■■■□□ 2.48
ABCF3-216ENST00000485921 PDIA6Q15084 440 aa30.52■■■□□ 2.48
ABCF3-216ENST00000485921 MTFR1LQ9H019 292 aa30.52■■■□□ 2.48
ABCF3-216ENST00000485921 ZBED9Q6R2W3 1325 aa30.51■■■□□ 2.48
ABCF3-216ENST00000485921 TRMT2AQ8IZ69 625 aaKnown RBP30.51■■■□□ 2.47
ABCF3-216ENST00000485921 ARXQ96QS3 562 aa30.51■■■□□ 2.47
ABCF3-216ENST00000485921 SRP68Q9UHB9 627 aaKnown RBP30.51■■■□□ 2.47
ABCF3-216ENST00000485921 ATF5Q9Y2D1 282 aaPredicted RBP30.51■■■□□ 2.47
ABCF3-216ENST00000485921 ZPR1O75312 459 aa30.5■■■□□ 2.47
ABCF3-216ENST00000485921 PROSER3Q2NL68 480 aa30.5■■■□□ 2.47
ABCF3-216ENST00000485921 CHMP4AQ9BY43 222 aa30.5■■■□□ 2.47
ABCF3-216ENST00000485921 CHPF2Q9P2E5 772 aa30.5■■■□□ 2.47
ABCF3-216ENST00000485921 NARFQ9UHQ1 456 aa30.5■■■□□ 2.47
ABCF3-216ENST00000485921 USP42Q9H9J4 1324 aaKnown RBP30.49■■■□□ 2.47
ABCF3-216ENST00000485921 ANXA1P04083 346 aa30.49■■■□□ 2.47
ABCF3-216ENST00000485921 DDX21Q9NR30 783 aaKnown RBP eCLIP30.49■■■□□ 2.47
ABCF3-216ENST00000485921 TBC1D2BQ9UPU7 963 aa30.49■■■□□ 2.47
ABCF3-216ENST00000485921 C4AP0C0L4 1744 aa30.48■■■□□ 2.47
ABCF3-216ENST00000485921 VAMP4O75379 141 aa30.48■■■□□ 2.47
ABCF3-216ENST00000485921 SPON1Q9HCB6 807 aa30.48■■■□□ 2.47
ABCF3-216ENST00000485921 DBF4Q9UBU7 674 aaPredicted RBP30.48■■■□□ 2.47
ABCF3-216ENST00000485921 CCDC30Q5VVM6 783 aa30.47■■■□□ 2.47
ABCF3-216ENST00000485921 MSL1Q68DK7 614 aa30.47■■■□□ 2.47
ABCF3-216ENST00000485921 DZIP3Q86Y13 1208 aaKnown RBP30.47■■■□□ 2.47
ABCF3-216ENST00000485921 GYS1P13807 737 aa30.46■■■□□ 2.47
ABCF3-216ENST00000485921 USPL1Q5W0Q7 1092 aa30.46■■■□□ 2.47
ABCF3-216ENST00000485921 LRP10Q7Z4F1 713 aa30.46■■■□□ 2.47
ABCF3-216ENST00000485921 NLGN1Q8N2Q7 840 aa30.43■■■□□ 2.46
ABCF3-216ENST00000485921 CAMTA2O94983 1202 aa30.42■■■□□ 2.46
ABCF3-216ENST00000485921 TTLL7Q6ZT98 887 aa30.42■■■□□ 2.46
ABCF3-216ENST00000485921 BCL2L12Q9HB09 334 aa30.42■■■□□ 2.46
ABCF3-216ENST00000485921 HYPKQ9NX55 129 aa30.42■■■□□ 2.46
ABCF3-216ENST00000485921 TCERG1O14776 1098 aaKnown RBP30.41■■■□□ 2.46
ABCF3-216ENST00000485921 FKBP8Q14318 412 aa30.41■■■□□ 2.46
ABCF3-216ENST00000485921 STK31Q9BXU1 1019 aa30.41■■■□□ 2.46
ABCF3-216ENST00000485921 PTGER2P43116 358 aa30.4■■■□□ 2.46
ABCF3-216ENST00000485921 KIF6Q6ZMV9 814 aa30.4■■■□□ 2.46
ABCF3-216ENST00000485921 COPS6Q7L5N1 327 aa30.4■■■□□ 2.46
ABCF3-216ENST00000485921 XAGE3Q8WTP9 111 aa30.4■■■□□ 2.46
ABCF3-216ENST00000485921 POLD1P28340 1107 aa30.39■■■□□ 2.46
ABCF3-216ENST00000485921 AIMP1Q12904 312 aaKnown RBP30.39■■■□□ 2.46
ABCF3-216ENST00000485921 SGIP1Q9BQI5 828 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms