RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 CD2APQ9Y5K6 639 aa19.82■□□□□ 0.76
YIF1A-208ENST00000485820 MMP10P09238 476 aa19.81■□□□□ 0.76
YIF1A-208ENST00000485820 MIS18AQ9NYP9 233 aa19.81■□□□□ 0.76
YIF1A-208ENST00000485820 USP42Q9H9J4 1324 aaKnown RBP19.8■□□□□ 0.76
YIF1A-208ENST00000485820 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
YIF1A-208ENST00000485820 TMPOP42166 694 aaKnown RBP19.8■□□□□ 0.76
YIF1A-208ENST00000485820 THUMPD2Q9BTF0 503 aaKnown RBP19.8■□□□□ 0.76
YIF1A-208ENST00000485820 USP16Q9Y5T5 823 aa19.8■□□□□ 0.76
YIF1A-208ENST00000485820 EIF5P55010 431 aaKnown RBP19.79■□□□□ 0.76
YIF1A-208ENST00000485820 RIPK4P57078 832 aa19.79■□□□□ 0.76
YIF1A-208ENST00000485820 FKBP8Q14318 412 aa19.79■□□□□ 0.76
YIF1A-208ENST00000485820 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
YIF1A-208ENST00000485820 PRAMEF22A3QJZ6 481 aa19.78■□□□□ 0.76
YIF1A-208ENST00000485820 A1BGP04217 495 aa19.78■□□□□ 0.76
YIF1A-208ENST00000485820 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
YIF1A-208ENST00000485820 SNRPA1P09661 255 aaKnown RBP19.77■□□□□ 0.76
YIF1A-208ENST00000485820 USPL1Q5W0Q7 1092 aa19.77■□□□□ 0.76
YIF1A-208ENST00000485820 RUNDC1Q96C34 613 aa19.77■□□□□ 0.76
YIF1A-208ENST00000485820 NARFQ9UHQ1 456 aa19.77■□□□□ 0.76
YIF1A-208ENST00000485820 ZPR1O75312 459 aa19.76■□□□□ 0.75
YIF1A-208ENST00000485820 TM4SF1P30408 202 aa19.76■□□□□ 0.75
YIF1A-208ENST00000485820 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
YIF1A-208ENST00000485820 COL15A1P39059 1388 aa19.75■□□□□ 0.75
YIF1A-208ENST00000485820 GPR162Q16538 588 aa19.75■□□□□ 0.75
YIF1A-208ENST00000485820 CCDC184Q52MB2 194 aa19.75■□□□□ 0.75
YIF1A-208ENST00000485820 BCL2L12Q9HB09 334 aa19.75■□□□□ 0.75
YIF1A-208ENST00000485820 IL6STP40189 918 aaPredicted RBP19.74■□□□□ 0.75
YIF1A-208ENST00000485820 RRP7AQ9Y3A4 280 aaKnown RBP19.74■□□□□ 0.75
YIF1A-208ENST00000485820 PARP3Q9Y6F1 533 aa19.74■□□□□ 0.75
YIF1A-208ENST00000485820 KDM3BQ7LBC6 1761 aa19.73■□□□□ 0.75
YIF1A-208ENST00000485820 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
YIF1A-208ENST00000485820 DDR1Q08345 913 aa19.73■□□□□ 0.75
YIF1A-208ENST00000485820 KIF13BQ9NQT8 1826 aa19.73■□□□□ 0.75
YIF1A-208ENST00000485820 A0A087WZG4 1122 aa19.72■□□□□ 0.75
YIF1A-208ENST00000485820 NEUROD2Q15784 382 aa19.72■□□□□ 0.75
YIF1A-208ENST00000485820 TRIM35Q9UPQ4 493 aa19.72■□□□□ 0.75
YIF1A-208ENST00000485820 GIGYF1O75420 1035 aaPredicted RBP19.71■□□□□ 0.75
YIF1A-208ENST00000485820 YBX3P16989 372 aaKnown RBP eCLIP19.71■□□□□ 0.753e-12■□□□□ 8.5
YIF1A-208ENST00000485820 LMOD3Q0VAK6 560 aa19.71■□□□□ 0.75
YIF1A-208ENST00000485820 POLRMTO00411 1230 aaKnown RBP19.7■□□□□ 0.74
YIF1A-208ENST00000485820 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
YIF1A-208ENST00000485820 NFIXQ14938 502 aa19.7■□□□□ 0.74
YIF1A-208ENST00000485820 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
YIF1A-208ENST00000485820 TBC1D2BQ9UPU7 963 aa19.7■□□□□ 0.74
YIF1A-208ENST00000485820 CHD4Q14839 1912 aa19.69■□□□□ 0.74
YIF1A-208ENST00000485820 NBPF26B4DH59 902 aa19.69■□□□□ 0.74
YIF1A-208ENST00000485820 TGFB2P61812 414 aa19.69■□□□□ 0.74
YIF1A-208ENST00000485820 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
YIF1A-208ENST00000485820 NBPF15Q8N660 670 aa19.69■□□□□ 0.74
YIF1A-208ENST00000485820 BABAM1Q9NWV8 329 aa19.69■□□□□ 0.74
YIF1A-208ENST00000485820 ZNF330Q9Y3S2 320 aaPredicted RBP19.69■□□□□ 0.74
YIF1A-208ENST00000485820 UTRNP46939 3433 aa19.69■□□□□ 0.74
YIF1A-208ENST00000485820 ANP32CO43423 234 aa19.68■□□□□ 0.74
YIF1A-208ENST00000485820 YY1P25490 414 aa19.68■□□□□ 0.74
YIF1A-208ENST00000485820 TSPYL4Q9UJ04 414 aa19.68■□□□□ 0.74
YIF1A-208ENST00000485820 C10orf71Q711Q0 1435 aa19.68■□□□□ 0.74
YIF1A-208ENST00000485820 KIAA1551Q9HCM1 1747 aa19.67■□□□□ 0.74
YIF1A-208ENST00000485820 N4BP2Q86UW6 1770 aaPredicted RBP19.66■□□□□ 0.74
YIF1A-208ENST00000485820 A0A0G2JLW4 131 aa19.66■□□□□ 0.74
YIF1A-208ENST00000485820 APAF1O14727 1248 aa19.66■□□□□ 0.74
YIF1A-208ENST00000485820 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
YIF1A-208ENST00000485820 CAMTA2O94983 1202 aa19.66■□□□□ 0.74
YIF1A-208ENST00000485820 AFDNP55196 1824 aaKnown RBP19.66■□□□□ 0.74
YIF1A-208ENST00000485820 CHL1O00533 1208 aa19.65■□□□□ 0.74
YIF1A-208ENST00000485820 TBC1D9BQ66K14 1250 aa19.65■□□□□ 0.74
YIF1A-208ENST00000485820 NPM2Q86SE8 214 aaKnown RBP19.65■□□□□ 0.74
YIF1A-208ENST00000485820 DZIP3Q86Y13 1208 aaKnown RBP19.65■□□□□ 0.74
YIF1A-208ENST00000485820 GOLGB1Q14789 3259 aaKnown RBP19.65■□□□□ 0.74
YIF1A-208ENST00000485820 PXDNLA1KZ92 1463 aa19.65■□□□□ 0.74
YIF1A-208ENST00000485820 SERPINB2P05120 415 aa19.64■□□□□ 0.73
YIF1A-208ENST00000485820 DPEP1P16444 411 aa19.64■□□□□ 0.73
YIF1A-208ENST00000485820 KCNA3P22001 575 aa19.64■□□□□ 0.73
YIF1A-208ENST00000485820 LAMB4A4D0S4 1761 aa19.63■□□□□ 0.73
YIF1A-208ENST00000485820 NRXN2Q9P2S2 1712 aa19.63■□□□□ 0.73
YIF1A-208ENST00000485820 BICDL1Q6ZP65 573 aa19.63■□□□□ 0.73
YIF1A-208ENST00000485820 WWC3Q9ULE0 1092 aa19.63■□□□□ 0.73
YIF1A-208ENST00000485820 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
YIF1A-208ENST00000485820 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
YIF1A-208ENST00000485820 LAS1LQ9Y4W2 734 aaKnown RBP19.61■□□□□ 0.73
YIF1A-208ENST00000485820 SCN7AQ01118 1682 aa19.61■□□□□ 0.73
YIF1A-208ENST00000485820 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
YIF1A-208ENST00000485820 BCORQ6W2J9 1755 aa19.6■□□□□ 0.73
YIF1A-208ENST00000485820 RGL2O15211 777 aa19.59■□□□□ 0.73
YIF1A-208ENST00000485820 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
YIF1A-208ENST00000485820 SETDB2Q96T68 719 aa19.59■□□□□ 0.73
YIF1A-208ENST00000485820 ZNF853P0CG23 659 aa19.58■□□□□ 0.72
YIF1A-208ENST00000485820 CHRNA5P30532 468 aa19.58■□□□□ 0.72
YIF1A-208ENST00000485820 KRT24Q2M2I5 525 aa19.58■□□□□ 0.72
YIF1A-208ENST00000485820 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
YIF1A-208ENST00000485820 ERBB4Q15303 1308 aa19.57■□□□□ 0.72
YIF1A-208ENST00000485820 MYL6BP14649 208 aa19.57■□□□□ 0.72
YIF1A-208ENST00000485820 EIF2S2P20042 333 aaKnown RBP19.57■□□□□ 0.72
YIF1A-208ENST00000485820 PDIA6Q15084 440 aa19.57■□□□□ 0.72
YIF1A-208ENST00000485820 HLFQ16534 295 aa19.57■□□□□ 0.72
YIF1A-208ENST00000485820 PIM2Q9P1W9 311 aa19.57■□□□□ 0.72
YIF1A-208ENST00000485820 TTLL7Q6ZT98 887 aa19.56■□□□□ 0.72
YIF1A-208ENST00000485820 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
YIF1A-208ENST00000485820 BCS1LQ9Y276 419 aa19.56■□□□□ 0.72
YIF1A-208ENST00000485820 CARMIL3Q8ND23 1372 aa19.56■□□□□ 0.72
YIF1A-208ENST00000485820 ERVV-1B6SEH8 477 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms