RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 CHRNA5P30532 468 aa17.01■□□□□ 0.31
PRAME-212ENST00000485532 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
PRAME-212ENST00000485532 SIPA1L3O60292 1781 aaPredicted RBP17.01■□□□□ 0.31
PRAME-212ENST00000485532 COL15A1P39059 1388 aa17.01■□□□□ 0.31
PRAME-212ENST00000485532 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
PRAME-212ENST00000485532 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
PRAME-212ENST00000485532 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
PRAME-212ENST00000485532 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
PRAME-212ENST00000485532 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
PRAME-212ENST00000485532 KIF3CO14782 793 aa16.98■□□□□ 0.31
PRAME-212ENST00000485532 NFIXQ14938 502 aa16.98■□□□□ 0.31
PRAME-212ENST00000485532 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
PRAME-212ENST00000485532 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
PRAME-212ENST00000485532 NARFQ9UHQ1 456 aa16.98■□□□□ 0.31
PRAME-212ENST00000485532 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
PRAME-212ENST00000485532 TEFQ10587 303 aa16.97■□□□□ 0.31
PRAME-212ENST00000485532 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
PRAME-212ENST00000485532 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
PRAME-212ENST00000485532 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
PRAME-212ENST00000485532 NRXN2Q9P2S2 1712 aa16.96■□□□□ 0.31
PRAME-212ENST00000485532 KCNQ3O43525 872 aa16.96■□□□□ 0.31
PRAME-212ENST00000485532 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
PRAME-212ENST00000485532 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
PRAME-212ENST00000485532 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
PRAME-212ENST00000485532 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
PRAME-212ENST00000485532 STARD3NLO95772 234 aa16.94■□□□□ 0.3
PRAME-212ENST00000485532 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
PRAME-212ENST00000485532 EIF5P55010 431 aaKnown RBP16.94■□□□□ 0.3
PRAME-212ENST00000485532 C9orf131Q5VYM1 1079 aa16.94■□□□□ 0.3
PRAME-212ENST00000485532 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
PRAME-212ENST00000485532 SBF1O95248 1867 aa16.93■□□□□ 0.3
PRAME-212ENST00000485532 CARMIL3Q8ND23 1372 aa16.93■□□□□ 0.3
PRAME-212ENST00000485532 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
PRAME-212ENST00000485532 SERPINB2P05120 415 aa16.93■□□□□ 0.3
PRAME-212ENST00000485532 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
PRAME-212ENST00000485532 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
PRAME-212ENST00000485532 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
PRAME-212ENST00000485532 A1BGP04217 495 aa16.92■□□□□ 0.3
PRAME-212ENST00000485532 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
PRAME-212ENST00000485532 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRAME-212ENST00000485532 TBC1D2BQ9UPU7 963 aa16.92■□□□□ 0.3
PRAME-212ENST00000485532 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
PRAME-212ENST00000485532 SCN7AQ01118 1682 aa16.91■□□□□ 0.3
PRAME-212ENST00000485532 HSPA6P17066 643 aa16.91■□□□□ 0.3
PRAME-212ENST00000485532 TBC1D9BQ66K14 1250 aa16.91■□□□□ 0.3
PRAME-212ENST00000485532 ANKRD31Q8N7Z5 1873 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
PRAME-212ENST00000485532 RASSF7Q02833 373 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 MCM10Q7L590 875 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
PRAME-212ENST00000485532 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
PRAME-212ENST00000485532 PRELPP51888 382 aa16.88■□□□□ 0.29
PRAME-212ENST00000485532 C2CD5Q86YS7 1000 aa16.88■□□□□ 0.29
PRAME-212ENST00000485532 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
PRAME-212ENST00000485532 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
PRAME-212ENST00000485532 A0A087WZG4 1122 aa16.87■□□□□ 0.29
PRAME-212ENST00000485532 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
PRAME-212ENST00000485532 CCDC88AQ3V6T2 1871 aa16.86■□□□□ 0.29
PRAME-212ENST00000485532 CAMTA2O94983 1202 aa16.86■□□□□ 0.29
PRAME-212ENST00000485532 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
PRAME-212ENST00000485532 BCORQ6W2J9 1755 aa16.86■□□□□ 0.29
PRAME-212ENST00000485532 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
PRAME-212ENST00000485532 TOMM70O94826 608 aa16.85■□□□□ 0.29
PRAME-212ENST00000485532 PRR5LQ6MZQ0 368 aa16.85■□□□□ 0.29
PRAME-212ENST00000485532 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
PRAME-212ENST00000485532 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
PRAME-212ENST00000485532 H0YIN7 160 aa16.84■□□□□ 0.29
PRAME-212ENST00000485532 RTF1Q92541 710 aaKnown RBP16.84■□□□□ 0.29
PRAME-212ENST00000485532 CACNA1SQ13698 1873 aa16.84■□□□□ 0.29
PRAME-212ENST00000485532 DZIP3Q86Y13 1208 aaKnown RBP16.83■□□□□ 0.28
PRAME-212ENST00000485532 ZNF622Q969S3 477 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRAME-212ENST00000485532 RRAGCQ9HB90 399 aa16.83■□□□□ 0.28
PRAME-212ENST00000485532 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
PRAME-212ENST00000485532 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
PRAME-212ENST00000485532 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
PRAME-212ENST00000485532 NFKBIEO00221 500 aa16.81■□□□□ 0.28
PRAME-212ENST00000485532 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
PRAME-212ENST00000485532 NPM2Q86SE8 214 aaKnown RBP16.81■□□□□ 0.28
PRAME-212ENST00000485532 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
PRAME-212ENST00000485532 BRIP1Q9BX63 1249 aa16.81■□□□□ 0.28
PRAME-212ENST00000485532 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
PRAME-212ENST00000485532 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
PRAME-212ENST00000485532 NBPF26B4DH59 902 aa16.8■□□□□ 0.28
PRAME-212ENST00000485532 C21orf2O43822 256 aa16.8■□□□□ 0.28
PRAME-212ENST00000485532 LMNB1P20700 586 aa16.8■□□□□ 0.28
PRAME-212ENST00000485532 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
PRAME-212ENST00000485532 NBPF15Q8N660 670 aa16.8■□□□□ 0.28
PRAME-212ENST00000485532 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
PRAME-212ENST00000485532 PDE6BP35913 854 aa16.79■□□□□ 0.28
PRAME-212ENST00000485532 HTRA3P83110 453 aa16.79■□□□□ 0.28
PRAME-212ENST00000485532 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
PRAME-212ENST00000485532 CNBD1Q8NA66 436 aa16.79■□□□□ 0.28
PRAME-212ENST00000485532 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
PRAME-212ENST00000485532 NPHP1O15259 732 aa16.78■□□□□ 0.28
PRAME-212ENST00000485532 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms