RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 HOXB7P09629 217 aa28.07■■■□□ 2.08
NECAB3-211ENST00000485399 SMARCC1Q92922 1105 aaPredicted RBP28.07■■■□□ 2.08
NECAB3-211ENST00000485399 ZNF428Q96B54 188 aa28.07■■■□□ 2.08
NECAB3-211ENST00000485399 ZNF496Q96IT1 587 aaPredicted RBP28.07■■■□□ 2.08
NECAB3-211ENST00000485399 HEG1Q9ULI3 1381 aa28.07■■■□□ 2.08
NECAB3-211ENST00000485399 COL24A1Q17RW2 1714 aa28.06■■■□□ 2.08
NECAB3-211ENST00000485399 SLC27A3Q5K4L6 730 aa28.06■■■□□ 2.08
NECAB3-211ENST00000485399 RCAN3Q9UKA8 241 aa28.05■■■□□ 2.08
NECAB3-211ENST00000485399 KCPQ6ZWJ8 1503 aa28.05■■■□□ 2.08
NECAB3-211ENST00000485399 GIGYF1O75420 1035 aaPredicted RBP28.04■■■□□ 2.08
NECAB3-211ENST00000485399 CHMP4AQ9BY43 222 aa28.04■■■□□ 2.08
NECAB3-211ENST00000485399 PTCD1O75127 700 aaKnown RBP28.02■■■□□ 2.08
NECAB3-211ENST00000485399 SNRPA1P09661 255 aaKnown RBP28.02■■■□□ 2.08
NECAB3-211ENST00000485399 VSIG10Q8N0Z9 540 aa28.01■■■□□ 2.07
NECAB3-211ENST00000485399 ARXQ96QS3 562 aa28.01■■■□□ 2.07
NECAB3-211ENST00000485399 KCNQ4P56696 695 aa28■■■□□ 2.07
NECAB3-211ENST00000485399 RBM42Q9BTD8 480 aaKnown RBP28■■■□□ 2.07
NECAB3-211ENST00000485399 PALLDQ8WX93 1383 aa28■■■□□ 2.07
NECAB3-211ENST00000485399 RARSP54136 660 aaKnown RBP27.99■■■□□ 2.07
NECAB3-211ENST00000485399 PNPLA7Q6ZV29 1317 aa27.99■■■□□ 2.07
NECAB3-211ENST00000485399 ALDH1L2Q3SY69 923 aa27.99■■■□□ 2.07
NECAB3-211ENST00000485399 CCDC30Q5VVM6 783 aa27.98■■■□□ 2.07
NECAB3-211ENST00000485399 TEX13AQ9BXU3 409 aaPredicted RBP27.98■■■□□ 2.07
NECAB3-211ENST00000485399 C5P01031 1676 aa27.97■■■□□ 2.07
NECAB3-211ENST00000485399 HDGFL1Q5TGJ6 251 aa27.97■■■□□ 2.07
NECAB3-211ENST00000485399 SLC16A10Q8TF71 515 aa27.97■■■□□ 2.07
NECAB3-211ENST00000485399 LAMB4A4D0S4 1761 aa27.95■■■□□ 2.07
NECAB3-211ENST00000485399 CHD4Q14839 1912 aa27.95■■■□□ 2.07
NECAB3-211ENST00000485399 PRAMEF22A3QJZ6 481 aa27.95■■■□□ 2.06
NECAB3-211ENST00000485399 EIF2S2P20042 333 aaKnown RBP27.95■■■□□ 2.06
NECAB3-211ENST00000485399 LOC102724428A0A0B4J2F2 783 aa27.94■■■□□ 2.06
NECAB3-211ENST00000485399 SIK1P57059 783 aa27.94■■■□□ 2.06
NECAB3-211ENST00000485399 SSH1Q8WYL5 1049 aa27.94■■■□□ 2.06
NECAB3-211ENST00000485399 ZNF831Q5JPB2 1677 aa27.94■■■□□ 2.06
NECAB3-211ENST00000485399 STK31Q9BXU1 1019 aa27.93■■■□□ 2.06
NECAB3-211ENST00000485399 SMC4Q9NTJ3 1288 aa27.93■■■□□ 2.06
NECAB3-211ENST00000485399 USP16Q9Y5T5 823 aa27.93■■■□□ 2.06
NECAB3-211ENST00000485399 TFCP2L1Q9NZI6 479 aa27.92■■■□□ 2.06
NECAB3-211ENST00000485399 CICQ96RK0 1608 aaPredicted RBP27.92■■■□□ 2.06
NECAB3-211ENST00000485399 CACNA1FO60840 1977 aa27.91■■■□□ 2.06
NECAB3-211ENST00000485399 NECTIN2Q92692 538 aa27.91■■■□□ 2.06
NECAB3-211ENST00000485399 SLC4A9Q96Q91 983 aa27.91■■■□□ 2.06
NECAB3-211ENST00000485399 BCAR3O75815 825 aa27.9■■■□□ 2.06
NECAB3-211ENST00000485399 ATP6V1AP38606 617 aa27.9■■■□□ 2.06
NECAB3-211ENST00000485399 CCNL1Q9UK58 526 aaPredicted RBP27.9■■■□□ 2.06
NECAB3-211ENST00000485399 TJP1Q07157 1748 aa27.89■■■□□ 2.06
NECAB3-211ENST00000485399 TCERG1O14776 1098 aaKnown RBP27.89■■■□□ 2.06
NECAB3-211ENST00000485399 STARD3NLO95772 234 aa27.89■■■□□ 2.06
NECAB3-211ENST00000485399 BRPF1P55201 1214 aaPredicted RBP27.89■■■□□ 2.06
NECAB3-211ENST00000485399 DNAJC10Q8IXB1 793 aa27.89■■■□□ 2.06
NECAB3-211ENST00000485399 MRPL50Q8N5N7 158 aaKnown RBP27.89■■■□□ 2.06
NECAB3-211ENST00000485399 BCL2L13Q9BXK5 485 aa27.89■■■□□ 2.06
NECAB3-211ENST00000485399 DBF4Q9UBU7 674 aaPredicted RBP27.88■■■□□ 2.05
NECAB3-211ENST00000485399 SUPT16HQ9Y5B9 1047 aaKnown RBP27.88■■■□□ 2.05
NECAB3-211ENST00000485399 TAF1LQ8IZX4 1826 aa27.88■■■□□ 2.05
NECAB3-211ENST00000485399 ERBB4Q15303 1308 aa27.87■■■□□ 2.05
NECAB3-211ENST00000485399 SLC4A2P04920 1241 aa27.86■■■□□ 2.05
NECAB3-211ENST00000485399 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.86■■■□□ 2.05
NECAB3-211ENST00000485399 ZNF784Q8NCA9 323 aaPredicted RBP27.86■■■□□ 2.05
NECAB3-211ENST00000485399 CHPF2Q9P2E5 772 aa27.86■■■□□ 2.05
NECAB3-211ENST00000485399 KIF16BQ96L93 1317 aa27.85■■■□□ 2.05
NECAB3-211ENST00000485399 POLD1P28340 1107 aa27.85■■■□□ 2.05
NECAB3-211ENST00000485399 DDX21Q9NR30 783 aaKnown RBP eCLIP27.85■■■□□ 2.05
NECAB3-211ENST00000485399 RNF123Q5XPI4 1314 aa27.84■■■□□ 2.05
NECAB3-211ENST00000485399 CYP19A1P11511 503 aaPredicted RBP27.84■■■□□ 2.05
NECAB3-211ENST00000485399 HMGB2P26583 209 aaKnown RBP27.84■■■□□ 2.05
NECAB3-211ENST00000485399 ITPK1Q13572 414 aa27.84■■■□□ 2.05
NECAB3-211ENST00000485399 COL23A1Q86Y22 540 aaPredicted RBP27.83■■■□□ 2.05
NECAB3-211ENST00000485399 HYPKQ9NX55 129 aa27.83■■■□□ 2.05
NECAB3-211ENST00000485399 IPO8O15397 1037 aaKnown RBP27.82■■■□□ 2.04
NECAB3-211ENST00000485399 RRP1P56182 461 aaKnown RBP27.82■■■□□ 2.04
NECAB3-211ENST00000485399 COL5A3P25940 1745 aaPredicted RBP27.81■■■□□ 2.04
NECAB3-211ENST00000485399 A1BGP04217 495 aa27.81■■■□□ 2.04
NECAB3-211ENST00000485399 CANXP27824 592 aaKnown RBP27.81■■■□□ 2.04
NECAB3-211ENST00000485399 PDIA6Q15084 440 aa27.81■■■□□ 2.04
NECAB3-211ENST00000485399 FRAT1Q92837 279 aaPredicted RBP27.81■■■□□ 2.04
NECAB3-211ENST00000485399 NOB1Q9ULX3 412 aaKnown RBP27.81■■■□□ 2.04
NECAB3-211ENST00000485399 KLHL34Q8N239 644 aa27.79■■■□□ 2.04
NECAB3-211ENST00000485399 NLGN2Q8NFZ4 835 aa27.79■■■□□ 2.04
NECAB3-211ENST00000485399 ARHGAP45Q92619 1136 aa27.79■■■□□ 2.04
NECAB3-211ENST00000485399 ZKSCAN2Q63HK3 967 aa27.78■■■□□ 2.04
NECAB3-211ENST00000485399 PTPRCP08575 1304 aa27.78■■■□□ 2.04
NECAB3-211ENST00000485399 ANXA1P04083 346 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 MYL6BP14649 208 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 GPR162Q16538 588 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 PROSER3Q2NL68 480 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 LINC00116Q8NCU8 138 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 CCDC87Q9NVE4 849 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 C4BP0C0L5 1744 aa27.77■■■□□ 2.04
NECAB3-211ENST00000485399 NBPF26B4DH59 902 aa27.76■■■□□ 2.03
NECAB3-211ENST00000485399 CRKLP46109 303 aaKnown RBP27.76■■■□□ 2.03
NECAB3-211ENST00000485399 FLIIQ13045 1269 aa27.76■■■□□ 2.03
NECAB3-211ENST00000485399 NBPF10Q6P3W6 841 aaKnown RBP27.76■■■□□ 2.03
NECAB3-211ENST00000485399 G2E3Q7L622 706 aa27.76■■■□□ 2.03
NECAB3-211ENST00000485399 NBPF15Q8N660 670 aa27.76■■■□□ 2.03
NECAB3-211ENST00000485399 CNTNAP4Q9C0A0 1308 aa27.76■■■□□ 2.03
NECAB3-211ENST00000485399 PLIN1O60240 522 aa27.75■■■□□ 2.03
NECAB3-211ENST00000485399 RC3H1Q5TC82 1133 aaKnown RBP27.75■■■□□ 2.03
NECAB3-211ENST00000485399 PHAXQ9H814 394 aaKnown RBP27.75■■■□□ 2.03
NECAB3-211ENST00000485399 PIP4K2AP48426 406 aaPredicted RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms