RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 TEX13AQ9BXU3 409 aaPredicted RBP24.28■■□□□ 1.48
PCCB-216ENST00000483687 DBF4Q9UBU7 674 aaPredicted RBP24.28■■□□□ 1.48
PCCB-216ENST00000483687 TJP1Q07157 1748 aa24.27■■□□□ 1.48
PCCB-216ENST00000483687 IPO8O15397 1037 aaKnown RBP24.27■■□□□ 1.48
PCCB-216ENST00000483687 ZKSCAN2Q63HK3 967 aa24.27■■□□□ 1.48
PCCB-216ENST00000483687 DNAJC10Q8IXB1 793 aa24.27■■□□□ 1.48
PCCB-216ENST00000483687 ATP6V1AP38606 617 aa24.26■■□□□ 1.47
PCCB-216ENST00000483687 IRX6P78412 446 aaPredicted RBP24.26■■□□□ 1.47
PCCB-216ENST00000483687 STARD3NLO95772 234 aa24.24■■□□□ 1.47
PCCB-216ENST00000483687 ANXA1P04083 346 aa24.24■■□□□ 1.47
PCCB-216ENST00000483687 DDX21Q9NR30 783 aaKnown RBP eCLIP24.24■■□□□ 1.47
PCCB-216ENST00000483687 LY75O60449 1722 aa24.24■■□□□ 1.47
PCCB-216ENST00000483687 ZNF831Q5JPB2 1677 aa24.24■■□□□ 1.47
PCCB-216ENST00000483687 ATF7IPQ6VMQ6 1270 aa24.24■■□□□ 1.47
PCCB-216ENST00000483687 CICQ96RK0 1608 aaPredicted RBP24.24■■□□□ 1.47
PCCB-216ENST00000483687 TRIM27P14373 513 aa24.23■■□□□ 1.47
PCCB-216ENST00000483687 PDIA6Q15084 440 aa24.23■■□□□ 1.47
PCCB-216ENST00000483687 PROSER3Q2NL68 480 aa24.23■■□□□ 1.47
PCCB-216ENST00000483687 G2E3Q7L622 706 aa24.23■■□□□ 1.47
PCCB-216ENST00000483687 ARHGAP45Q92619 1136 aa24.23■■□□□ 1.47
PCCB-216ENST00000483687 PTPRCP08575 1304 aa24.22■■□□□ 1.47
PCCB-216ENST00000483687 ERBB4Q15303 1308 aa24.22■■□□□ 1.47
PCCB-216ENST00000483687 FLIIQ13045 1269 aa24.22■■□□□ 1.47
PCCB-216ENST00000483687 C20orf194Q5TEA3 1177 aa24.22■■□□□ 1.47
PCCB-216ENST00000483687 PHAXQ9H814 394 aaKnown RBP24.22■■□□□ 1.47
PCCB-216ENST00000483687 HYPKQ9NX55 129 aa24.22■■□□□ 1.47
PCCB-216ENST00000483687 MYL6BP14649 208 aa24.21■■□□□ 1.47
PCCB-216ENST00000483687 PIP4K2AP48426 406 aaPredicted RBP24.21■■□□□ 1.47
PCCB-216ENST00000483687 A1BGP04217 495 aa24.21■■□□□ 1.47
PCCB-216ENST00000483687 FTSJ3Q8IY81 847 aaKnown RBP24.21■■□□□ 1.47
PCCB-216ENST00000483687 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
PCCB-216ENST00000483687 TNNQ9UQP3 1299 aa24.21■■□□□ 1.47
PCCB-216ENST00000483687 CYP19A1P11511 503 aaPredicted RBP24.2■■□□□ 1.46
PCCB-216ENST00000483687 ITPK1Q13572 414 aa24.2■■□□□ 1.46
PCCB-216ENST00000483687 PDE3AQ14432 1141 aa24.2■■□□□ 1.46
PCCB-216ENST00000483687 MS4A1P11836 297 aa24.19■■□□□ 1.46
PCCB-216ENST00000483687 FKBP5Q13451 457 aaPredicted RBP24.19■■□□□ 1.46
PCCB-216ENST00000483687 DZIP1LQ8IYY4 767 aaKnown RBP24.19■■□□□ 1.46
PCCB-216ENST00000483687 API5Q9BZZ5 524 aaKnown RBP24.19■■□□□ 1.46
PCCB-216ENST00000483687 COL5A3P25940 1745 aaPredicted RBP24.19■■□□□ 1.46
PCCB-216ENST00000483687 FKBP8Q14318 412 aa24.18■■□□□ 1.46
PCCB-216ENST00000483687 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
PCCB-216ENST00000483687 NBPF26B4DH59 902 aa24.18■■□□□ 1.46
PCCB-216ENST00000483687 NBPF14Q5TI25 921 aa24.18■■□□□ 1.46
PCCB-216ENST00000483687 NBPF10Q6P3W6 841 aaKnown RBP24.18■■□□□ 1.46
PCCB-216ENST00000483687 NBPF15Q8N660 670 aa24.18■■□□□ 1.46
PCCB-216ENST00000483687 PANK1Q8TE04 598 aa24.18■■□□□ 1.46
PCCB-216ENST00000483687 KCNQ4P56696 695 aa24.17■■□□□ 1.46
PCCB-216ENST00000483687 TNS1Q9HBL0 1735 aaKnown RBP24.17■■□□□ 1.46
PCCB-216ENST00000483687 RLBP1P12271 317 aa24.16■■□□□ 1.46
PCCB-216ENST00000483687 APBA3O96018 575 aa24.15■■□□□ 1.46
PCCB-216ENST00000483687 AIMP1Q12904 312 aaKnown RBP24.15■■□□□ 1.46
PCCB-216ENST00000483687 LRP10Q7Z4F1 713 aa24.15■■□□□ 1.46
PCCB-216ENST00000483687 TAF1LQ8IZX4 1826 aa24.15■■□□□ 1.46
PCCB-216ENST00000483687 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
PCCB-216ENST00000483687 ZBTB1Q9Y2K1 713 aa24.15■■□□□ 1.46
PCCB-216ENST00000483687 GTF3C3Q9Y5Q9 886 aa24.15■■□□□ 1.46
PCCB-216ENST00000483687 MYH14Q7Z406 1995 aaKnown RBP24.14■■□□□ 1.46
PCCB-216ENST00000483687 LINC00116Q8NCU8 138 aa24.14■■□□□ 1.45
PCCB-216ENST00000483687 XAGE3Q8WTP9 111 aa24.14■■□□□ 1.45
PCCB-216ENST00000483687 COPS6Q7L5N1 327 aa24.13■■□□□ 1.45
PCCB-216ENST00000483687 CCDC87Q9NVE4 849 aa24.13■■□□□ 1.45
PCCB-216ENST00000483687 ZNF330Q9Y3S2 320 aaPredicted RBP24.13■■□□□ 1.45
PCCB-216ENST00000483687 ABCC4O15439 1325 aa24.13■■□□□ 1.45
PCCB-216ENST00000483687 F6X3S4 739 aa24.13■■□□□ 1.45
PCCB-216ENST00000483687 DDX58O95786 925 aaKnown RBP24.13■■□□□ 1.45
PCCB-216ENST00000483687 RREB1Q92766 1687 aa24.13■■□□□ 1.45
PCCB-216ENST00000483687 CRBNQ96SW2 442 aa24.13■■□□□ 1.45
PCCB-216ENST00000483687 PLSCR1O15162 318 aa24.12■■□□□ 1.45
PCCB-216ENST00000483687 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
PCCB-216ENST00000483687 COG6Q9Y2V7 657 aa24.12■■□□□ 1.45
PCCB-216ENST00000483687 INTS5Q6P9B9 1019 aaKnown RBP24.11■■□□□ 1.45
PCCB-216ENST00000483687 TMEM57Q8N5G2 664 aa24.11■■□□□ 1.45
PCCB-216ENST00000483687 PI4KAP2A4QPH2 592 aa24.1■■□□□ 1.45
PCCB-216ENST00000483687 SLC4A10Q6U841 1118 aa24.1■■□□□ 1.45
PCCB-216ENST00000483687 PI4KAP1Q8N8J0 262 aa24.1■■□□□ 1.45
PCCB-216ENST00000483687 IL6STP40189 918 aaPredicted RBP24.1■■□□□ 1.45
PCCB-216ENST00000483687 ITPRIPQ8IWB1 547 aa24.1■■□□□ 1.45
PCCB-216ENST00000483687 LRRC4BQ9NT99 713 aa24.1■■□□□ 1.45
PCCB-216ENST00000483687 CNTNAP4Q9C0A0 1308 aa24.09■■□□□ 1.45
PCCB-216ENST00000483687 MVPQ14764 893 aaKnown RBP24.09■■□□□ 1.45
PCCB-216ENST00000483687 TXNRD1Q16881 649 aa24.09■■□□□ 1.45
PCCB-216ENST00000483687 KSR2Q6VAB6 950 aa24.09■■□□□ 1.45
PCCB-216ENST00000483687 NPM2Q86SE8 214 aaKnown RBP24.09■■□□□ 1.45
PCCB-216ENST00000483687 EXOC6Q8TAG9 804 aa24.09■■□□□ 1.45
PCCB-216ENST00000483687 ADCY9O60503 1353 aa24.08■■□□□ 1.45
PCCB-216ENST00000483687 RGPD3A6NKT7 1758 aaPredicted RBP24.08■■□□□ 1.45
PCCB-216ENST00000483687 RGPD4Q7Z3J3 1758 aa24.08■■□□□ 1.45
PCCB-216ENST00000483687 C4BP0C0L5 1744 aa24.08■■□□□ 1.44
PCCB-216ENST00000483687 ANKRD13DQ6ZTN6 518 aa24.07■■□□□ 1.44
PCCB-216ENST00000483687 RIC3Q7Z5B4 369 aa24.07■■□□□ 1.44
PCCB-216ENST00000483687 DNAAF4Q8WXU2 420 aa24.07■■□□□ 1.44
PCCB-216ENST00000483687 MAP3K2Q9Y2U5 619 aa24.07■■□□□ 1.44
PCCB-216ENST00000483687 PXDNLA1KZ92 1463 aa24.07■■□□□ 1.44
PCCB-216ENST00000483687 RC3H1Q5TC82 1133 aaKnown RBP24.07■■□□□ 1.44
PCCB-216ENST00000483687 TTLL7Q6ZT98 887 aa24.07■■□□□ 1.44
PCCB-216ENST00000483687 SF3B2Q13435 895 aaKnown RBP24.06■■□□□ 1.44
PCCB-216ENST00000483687 INTS3Q68E01 1043 aaKnown RBP24.06■■□□□ 1.44
PCCB-216ENST00000483687 PROM2Q8N271 834 aa24.06■■□□□ 1.44
PCCB-216ENST00000483687 N4BP2Q86UW6 1770 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms