RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 MCM3P25205 808 aa11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 EZRP15311 586 aaKnown RBP11.15□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.63
CDK5RAP2-216ENST00000483412 KIF6Q6ZMV9 814 aa11.15□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ZNF397Q8NF99 534 aaPredicted RBP11.15□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 TNRQ92752 1358 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 LMAN1P49257 510 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PLEKHH1Q9ULM0 1364 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GOLGA6L10A0A0M3HER8 536 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CCDC57Q2TAC2 916 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 MICALCLQ6ZW33 695 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ABCC2Q92887 1545 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 FKBP4Q02790 459 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SPA17Q15506 151 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 NACAP1Q9BZK3 213 aa11.14□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 TIGD1Q96MW7 591 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 FAM107BQ9H098 131 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ZSCAN23Q3MJ62 389 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 C14orf93Q9H972 538 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PRIMPOLQ96LW4 560 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SCAND2PQ9GZW5 306 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 EXOC6BQ9Y2D4 811 aa11.13□□□□□ -0.63
CDK5RAP2-216ENST00000483412 TMC6Q7Z403 805 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 NEMFO60524 1076 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 MX1P20591 662 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CLCN1P35523 988 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CABP4P57796 275 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SNW1Q13573 536 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SMARCC1Q92922 1105 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 BMS1Q14692 1282 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 IMMTQ16891 758 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 BAG4O95429 457 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 WASF1Q92558 559 aa11.12□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 NME9Q86XW9 330 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CTNNA3Q9UI47 895 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CCDC178Q5BJE1 867 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ZNF830Q96NB3 372 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ATP2B2Q01814 1243 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 IFFO1Q0D2I5 559 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 FCHSD2O94868 740 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 ABCC10Q5T3U5 1492 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 MYL6BP14649 208 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GSDMDP57764 484 aa11.11□□□□□ -0.63
CDK5RAP2-216ENST00000483412 DNA2P51530 1060 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 LUZP1Q86V48 1076 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GUCY1B3Q02153 619 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 NUP88Q99567 741 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PHF8Q9UPP1 1060 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CTAGE5O15320 804 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GTF2A1P52655 376 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CCDC91Q7Z6B0 441 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 UBAC1Q9BSL1 405 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 GNL3LQ9NVN8 582 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 KRT222Q8N1A0 295 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SH2B1Q9NRF2 756 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 UVSSAQ2YD98 709 aa11.1□□□□□ -0.63
CDK5RAP2-216ENST00000483412 CEP170Q5SW79 1584 aa11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 TDO2P48775 406 aa11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 STX1AQ16623 288 aa11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 BMP2KQ9NSY1 1161 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 SSR1P43307 286 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.636e-6■■■■■ 27.6
CDK5RAP2-216ENST00000483412 LRSAM1Q6UWE0 723 aa11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP2-216ENST00000483412 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.63
CDK5RAP2-216ENST00000483412 PANK2Q9BZ23 570 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms