RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
KDM4A-204ENST00000481296 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
KDM4A-204ENST00000481296 BAG6P46379 1132 aa12.33□□□□□ -0.44
KDM4A-204ENST00000481296 ITPK1Q13572 414 aa12.33□□□□□ -0.44
KDM4A-204ENST00000481296 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
KDM4A-204ENST00000481296 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
KDM4A-204ENST00000481296 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
KDM4A-204ENST00000481296 PLSCR1O15162 318 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 STK31Q9BXU1 1019 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 RCAN3Q9UKA8 241 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
KDM4A-204ENST00000481296 CASZ1Q86V15 1759 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 TCERG1O14776 1098 aaKnown RBP12.31□□□□□ -0.44
KDM4A-204ENST00000481296 STARD3NLO95772 234 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
KDM4A-204ENST00000481296 KCNQ4P56696 695 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 BCL2L13Q9BXK5 485 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 USP16Q9Y5T5 823 aa12.31□□□□□ -0.44
KDM4A-204ENST00000481296 CYP19A1P11511 503 aaPredicted RBP12.3□□□□□ -0.44
KDM4A-204ENST00000481296 ILDR2Q71H61 639 aa12.3□□□□□ -0.44
KDM4A-204ENST00000481296 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
KDM4A-204ENST00000481296 DBF4Q9UBU7 674 aaPredicted RBP12.3□□□□□ -0.44
KDM4A-204ENST00000481296 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
KDM4A-204ENST00000481296 COL24A1Q17RW2 1714 aa12.29□□□□□ -0.44
KDM4A-204ENST00000481296 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
KDM4A-204ENST00000481296 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
KDM4A-204ENST00000481296 LRRC4BQ9NT99 713 aa12.29□□□□□ -0.44
KDM4A-204ENST00000481296 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
KDM4A-204ENST00000481296 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
KDM4A-204ENST00000481296 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 ANXA1P04083 346 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 A1BGP04217 495 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
KDM4A-204ENST00000481296 EZH2Q15910 746 aaKnown RBP12.28□□□□□ -0.44
KDM4A-204ENST00000481296 PROSER3Q2NL68 480 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
KDM4A-204ENST00000481296 DDX21Q9NR30 783 aaKnown RBP eCLIP12.28□□□□□ -0.44
KDM4A-204ENST00000481296 COL15A1P39059 1388 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 LAMB2P55268 1798 aa12.28□□□□□ -0.44
KDM4A-204ENST00000481296 BCAR3O75815 825 aa12.27□□□□□ -0.45
KDM4A-204ENST00000481296 MYL6BP14649 208 aa12.27□□□□□ -0.45
KDM4A-204ENST00000481296 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
KDM4A-204ENST00000481296 CANXP27824 592 aaKnown RBP12.27□□□□□ -0.45
KDM4A-204ENST00000481296 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
KDM4A-204ENST00000481296 AK7Q96M32 723 aa12.27□□□□□ -0.45
KDM4A-204ENST00000481296 CAMKK2Q96RR4 588 aa12.27□□□□□ -0.45
KDM4A-204ENST00000481296 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 GNPATO15228 680 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 PDIA6Q15084 440 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 NBPF10Q6P3W6 841 aaKnown RBP12.26□□□□□ -0.45
KDM4A-204ENST00000481296 INTS5Q6P9B9 1019 aaKnown RBP12.26□□□□□ -0.45
KDM4A-204ENST00000481296 PROM2Q8N271 834 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 NBPF15Q8N660 670 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
KDM4A-204ENST00000481296 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
KDM4A-204ENST00000481296 IL6STP40189 918 aaPredicted RBP12.25□□□□□ -0.45
KDM4A-204ENST00000481296 BRPF1P55201 1214 aaPredicted RBP12.25□□□□□ -0.45
KDM4A-204ENST00000481296 FLIIQ13045 1269 aa12.25□□□□□ -0.45
KDM4A-204ENST00000481296 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
KDM4A-204ENST00000481296 PTPRCP08575 1304 aa12.25□□□□□ -0.45
KDM4A-204ENST00000481296 MYH3P11055 1940 aa12.25□□□□□ -0.45
KDM4A-204ENST00000481296 RRP1P56182 461 aaKnown RBP12.24□□□□□ -0.45
KDM4A-204ENST00000481296 FKBP5Q13451 457 aaPredicted RBP12.24□□□□□ -0.45
KDM4A-204ENST00000481296 G2E3Q7L622 706 aa12.24□□□□□ -0.45
KDM4A-204ENST00000481296 LRP10Q7Z4F1 713 aa12.24□□□□□ -0.45
KDM4A-204ENST00000481296 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
KDM4A-204ENST00000481296 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
KDM4A-204ENST00000481296 FRAT1Q92837 279 aaPredicted RBP12.24□□□□□ -0.45
KDM4A-204ENST00000481296 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
KDM4A-204ENST00000481296 ZNF827Q17R98 1081 aa12.23□□□□□ -0.45
KDM4A-204ENST00000481296 KIF6Q6ZMV9 814 aa12.23□□□□□ -0.45
KDM4A-204ENST00000481296 XAGE3Q8WTP9 111 aa12.23□□□□□ -0.45
KDM4A-204ENST00000481296 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
KDM4A-204ENST00000481296 RTCBQ9Y3I0 505 aaKnown RBP12.23□□□□□ -0.45
KDM4A-204ENST00000481296 ADCY9O60503 1353 aa12.22□□□□□ -0.45
KDM4A-204ENST00000481296 RPS6KA4O75676 772 aa12.22□□□□□ -0.45
KDM4A-204ENST00000481296 PHF14O94880 888 aa12.22□□□□□ -0.45
KDM4A-204ENST00000481296 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
KDM4A-204ENST00000481296 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
KDM4A-204ENST00000481296 AIMP1Q12904 312 aaKnown RBP12.22□□□□□ -0.45
KDM4A-204ENST00000481296 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
KDM4A-204ENST00000481296 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
KDM4A-204ENST00000481296 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
KDM4A-204ENST00000481296 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
KDM4A-204ENST00000481296 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.45
KDM4A-204ENST00000481296 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
KDM4A-204ENST00000481296 A0A087WZG4 1122 aa12.21□□□□□ -0.45
KDM4A-204ENST00000481296 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms