RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CCDC27Q2M243 656 aa26.56■■□□□ 1.84
CTSA-206ENST00000480961 KRT24Q2M2I5 525 aa26.56■■□□□ 1.84
CTSA-206ENST00000480961 TRAPPC3LQ5T215 181 aa26.56■■□□□ 1.84
CTSA-206ENST00000480961 CFAP44Q96MT7 982 aa26.56■■□□□ 1.84
CTSA-206ENST00000480961 ZNF831Q5JPB2 1677 aa26.55■■□□□ 1.84
CTSA-206ENST00000480961 GIGYF1O75420 1035 aaPredicted RBP26.55■■□□□ 1.84
CTSA-206ENST00000480961 PIP4K2AP48426 406 aaPredicted RBP26.55■■□□□ 1.84
CTSA-206ENST00000480961 CALD1Q05682 793 aaKnown RBP26.55■■□□□ 1.84
CTSA-206ENST00000480961 MSL1Q68DK7 614 aa26.55■■□□□ 1.84
CTSA-206ENST00000480961 ARHGEF1Q92888 912 aaKnown RBP26.55■■□□□ 1.84
CTSA-206ENST00000480961 MBIPQ9NS73 344 aa26.55■■□□□ 1.84
CTSA-206ENST00000480961 ZNF853P0CG23 659 aa26.54■■□□□ 1.84
CTSA-206ENST00000480961 SPON1Q9HCB6 807 aa26.54■■□□□ 1.84
CTSA-206ENST00000480961 IFT57Q9NWB7 429 aa26.54■■□□□ 1.84
CTSA-206ENST00000480961 MTFR1LQ9H019 292 aa26.53■■□□□ 1.84
CTSA-206ENST00000480961 COL5A3P25940 1745 aaPredicted RBP26.52■■□□□ 1.84
CTSA-206ENST00000480961 GNAI1P63096 354 aa26.52■■□□□ 1.84
CTSA-206ENST00000480961 CASZ1Q86V15 1759 aa26.52■■□□□ 1.84
CTSA-206ENST00000480961 ZNF330Q9Y3S2 320 aaPredicted RBP26.52■■□□□ 1.84
CTSA-206ENST00000480961 SOS1Q07889 1333 aaPredicted RBP26.51■■□□□ 1.83
CTSA-206ENST00000480961 RFC4P35249 363 aa26.51■■□□□ 1.83
CTSA-206ENST00000480961 SLC16A10Q8TF71 515 aa26.51■■□□□ 1.83
CTSA-206ENST00000480961 TUBGCP6Q96RT7 1819 aa26.51■■□□□ 1.83
CTSA-206ENST00000480961 NCBP3Q53F19 620 aaKnown RBP26.5■■□□□ 1.83
CTSA-206ENST00000480961 TSR2Q969E8 191 aaKnown RBP26.5■■□□□ 1.83
CTSA-206ENST00000480961 SRP68Q9UHB9 627 aaKnown RBP26.5■■□□□ 1.83
CTSA-206ENST00000480961 KDM3BQ7LBC6 1761 aa26.49■■□□□ 1.83
CTSA-206ENST00000480961 MYH14Q7Z406 1995 aaKnown RBP26.48■■□□□ 1.83
CTSA-206ENST00000480961 CICQ96RK0 1608 aaPredicted RBP26.48■■□□□ 1.83
CTSA-206ENST00000480961 ADRA2BP18089 450 aa26.48■■□□□ 1.83
CTSA-206ENST00000480961 EIF2S2P20042 333 aaKnown RBP26.48■■□□□ 1.83
CTSA-206ENST00000480961 PTGER2P43116 358 aa26.48■■□□□ 1.83
CTSA-206ENST00000480961 NECTIN2Q92692 538 aa26.48■■□□□ 1.83
CTSA-206ENST00000480961 NBPF26B4DH59 902 aa26.47■■□□□ 1.83
CTSA-206ENST00000480961 EIF5P55010 431 aaKnown RBP26.47■■□□□ 1.83
CTSA-206ENST00000480961 NBPF10Q6P3W6 841 aaKnown RBP26.47■■□□□ 1.83
CTSA-206ENST00000480961 NBPF15Q8N660 670 aa26.47■■□□□ 1.83
CTSA-206ENST00000480961 ARXQ96QS3 562 aa26.47■■□□□ 1.83
CTSA-206ENST00000480961 UBR3Q6ZT12 1888 aa26.47■■□□□ 1.83
CTSA-206ENST00000480961 ELL2O00472 640 aaPredicted RBP26.46■■□□□ 1.83
CTSA-206ENST00000480961 WDR63Q8IWG1 891 aa26.46■■□□□ 1.83
CTSA-206ENST00000480961 SPINK5Q9NQ38 1064 aaPredicted RBP26.45■■□□□ 1.82
CTSA-206ENST00000480961 COL15A1P39059 1388 aa26.45■■□□□ 1.82
CTSA-206ENST00000480961 IL6STP40189 918 aaPredicted RBP26.44■■□□□ 1.82
CTSA-206ENST00000480961 NGEFQ8N5V2 710 aa26.44■■□□□ 1.82
CTSA-206ENST00000480961 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
CTSA-206ENST00000480961 TBC1D2BQ9UPU7 963 aa26.44■■□□□ 1.82
CTSA-206ENST00000480961 IL16Q14005 1332 aa26.43■■□□□ 1.82
CTSA-206ENST00000480961 QSER1Q2KHR3 1735 aa26.43■■□□□ 1.82
CTSA-206ENST00000480961 GYS1P13807 737 aa26.43■■□□□ 1.82
CTSA-206ENST00000480961 DUSP27Q5VZP5 1158 aa26.43■■□□□ 1.82
CTSA-206ENST00000480961 USPL1Q5W0Q7 1092 aa26.43■■□□□ 1.82
CTSA-206ENST00000480961 C8orf58Q8NAV2 365 aa26.43■■□□□ 1.82
CTSA-206ENST00000480961 ZPR1O75312 459 aa26.42■■□□□ 1.82
CTSA-206ENST00000480961 MYL6BP14649 208 aa26.42■■□□□ 1.82
CTSA-206ENST00000480961 PPP1R1BQ9UD71 204 aaPredicted RBP26.42■■□□□ 1.82
CTSA-206ENST00000480961 USP42Q9H9J4 1324 aaKnown RBP26.41■■□□□ 1.82
CTSA-206ENST00000480961 POLD1P28340 1107 aa26.41■■□□□ 1.82
CTSA-206ENST00000480961 NPM2Q86SE8 214 aaKnown RBP26.41■■□□□ 1.82
CTSA-206ENST00000480961 A0A087WZG4 1122 aa26.4■■□□□ 1.82
CTSA-206ENST00000480961 ANXA1P04083 346 aa26.4■■□□□ 1.82
CTSA-206ENST00000480961 FKBP8Q14318 412 aa26.4■■□□□ 1.82
CTSA-206ENST00000480961 NARFQ9UHQ1 456 aa26.4■■□□□ 1.82
CTSA-206ENST00000480961 ZNF521Q96K83 1311 aa26.39■■□□□ 1.82
CTSA-206ENST00000480961 PROSER3Q2NL68 480 aa26.39■■□□□ 1.82
CTSA-206ENST00000480961 TSPYL6Q8N831 410 aa26.39■■□□□ 1.82
CTSA-206ENST00000480961 FANCIQ9NVI1 1328 aa26.39■■□□□ 1.81
CTSA-206ENST00000480961 HDGFL1Q5TGJ6 251 aa26.38■■□□□ 1.81
CTSA-206ENST00000480961 PDIA6Q15084 440 aa26.37■■□□□ 1.81
CTSA-206ENST00000480961 DZIP3Q86Y13 1208 aaKnown RBP26.37■■□□□ 1.81
CTSA-206ENST00000480961 NLGN1Q8N2Q7 840 aa26.37■■□□□ 1.81
CTSA-206ENST00000480961 BCL2L12Q9HB09 334 aa26.37■■□□□ 1.81
CTSA-206ENST00000480961 MMP10P09238 476 aa26.36■■□□□ 1.81
CTSA-206ENST00000480961 CAMTA2O94983 1202 aa26.34■■□□□ 1.81
CTSA-206ENST00000480961 HOXB7P09629 217 aa26.34■■□□□ 1.81
CTSA-206ENST00000480961 GOLGA2Q08379 1002 aa26.34■■□□□ 1.81
CTSA-206ENST00000480961 KLHL34Q8N239 644 aa26.34■■□□□ 1.81
CTSA-206ENST00000480961 CHPF2Q9P2E5 772 aa26.34■■□□□ 1.81
CTSA-206ENST00000480961 LRP5O75197 1615 aa26.33■■□□□ 1.81
CTSA-206ENST00000480961 EXOSC9Q06265 439 aaKnown RBP26.33■■□□□ 1.81
CTSA-206ENST00000480961 TTLL7Q6ZT98 887 aa26.33■■□□□ 1.81
CTSA-206ENST00000480961 CDCA7LQ96GN5 454 aa26.33■■□□□ 1.81
CTSA-206ENST00000480961 MYH16Q9H6N6 1097 aa26.33■■□□□ 1.81
CTSA-206ENST00000480961 TCERG1O14776 1098 aaKnown RBP26.32■■□□□ 1.8
CTSA-206ENST00000480961 HNRNPUQ00839 825 aaKnown RBP eCLIP26.32■■□□□ 1.8
CTSA-206ENST00000480961 BICDL1Q6ZP65 573 aa26.32■■□□□ 1.8
CTSA-206ENST00000480961 ERBB4Q15303 1308 aa26.32■■□□□ 1.8
CTSA-206ENST00000480961 LRP10Q7Z4F1 713 aa26.31■■□□□ 1.8
CTSA-206ENST00000480961 FHDC1Q9C0D6 1143 aaPredicted RBP26.31■■□□□ 1.8
CTSA-206ENST00000480961 DDR1Q08345 913 aa26.3■■□□□ 1.8
CTSA-206ENST00000480961 AIMP1Q12904 312 aaKnown RBP26.3■■□□□ 1.8
CTSA-206ENST00000480961 TWISTNBQ3B726 338 aaPredicted RBP26.3■■□□□ 1.8
CTSA-206ENST00000480961 DDX21Q9NR30 783 aaKnown RBP eCLIP26.3■■□□□ 1.8
CTSA-206ENST00000480961 C4AP0C0L4 1744 aa26.3■■□□□ 1.8
CTSA-206ENST00000480961 LAMB4A4D0S4 1761 aa26.29■■□□□ 1.8
CTSA-206ENST00000480961 TM4SF1P30408 202 aa26.29■■□□□ 1.8
CTSA-206ENST00000480961 NFIXQ14938 502 aa26.29■■□□□ 1.8
CTSA-206ENST00000480961 TBC1D9BQ66K14 1250 aa26.29■■□□□ 1.8
CTSA-206ENST00000480961 HLFQ16534 295 aa26.28■■□□□ 1.8
CTSA-206ENST00000480961 XAGE3Q8WTP9 111 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms