RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 IL16Q14005 1332 aa17.49■□□□□ 0.39
SNRNP200-204ENST00000480615 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
SNRNP200-204ENST00000480615 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
SNRNP200-204ENST00000480615 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
SNRNP200-204ENST00000480615 CDCA7LQ96GN5 454 aa17.48■□□□□ 0.39
SNRNP200-204ENST00000480615 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
SNRNP200-204ENST00000480615 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
SNRNP200-204ENST00000480615 STARD3NLO95772 234 aa17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 AMIGO3Q86WK7 504 aa17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 MSH5O43196 834 aa17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 A1BGP04217 495 aa17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 CCDC87Q9NVE4 849 aa17.47■□□□□ 0.39
SNRNP200-204ENST00000480615 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 C8orf58Q8NAV2 365 aa17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 PDGFDQ9GZP0 370 aaPredicted RBP17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
SNRNP200-204ENST00000480615 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
SNRNP200-204ENST00000480615 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
SNRNP200-204ENST00000480615 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
SNRNP200-204ENST00000480615 ZBED9Q6R2W3 1325 aa17.44■□□□□ 0.38
SNRNP200-204ENST00000480615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 E9PSI1 815 aa17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 ARXQ96QS3 562 aa17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
SNRNP200-204ENST00000480615 MYL6BP14649 208 aa17.42■□□□□ 0.38
SNRNP200-204ENST00000480615 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
SNRNP200-204ENST00000480615 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
SNRNP200-204ENST00000480615 ANXA1P04083 346 aa17.41■□□□□ 0.38
SNRNP200-204ENST00000480615 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
SNRNP200-204ENST00000480615 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
SNRNP200-204ENST00000480615 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 RPS6KA4O75676 772 aa17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 SRCAPQ6ZRS2 3230 aa17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 QSER1Q2KHR3 1735 aa17.4■□□□□ 0.38
SNRNP200-204ENST00000480615 TRAPPC3LQ5T215 181 aa17.39■□□□□ 0.38
SNRNP200-204ENST00000480615 C4AP0C0L4 1744 aa17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 COL15A1P39059 1388 aa17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 SSFA2P28290 1259 aa17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
SNRNP200-204ENST00000480615 ZBTB7AO95365 584 aa17.38■□□□□ 0.37
SNRNP200-204ENST00000480615 RFC4P35249 363 aa17.38■□□□□ 0.37
SNRNP200-204ENST00000480615 CASZ1Q86V15 1759 aa17.38■□□□□ 0.37
SNRNP200-204ENST00000480615 HOXB7P09629 217 aa17.37■□□□□ 0.37
SNRNP200-204ENST00000480615 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
SNRNP200-204ENST00000480615 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
SNRNP200-204ENST00000480615 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
SNRNP200-204ENST00000480615 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
SNRNP200-204ENST00000480615 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
SNRNP200-204ENST00000480615 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
SNRNP200-204ENST00000480615 PDIA6Q15084 440 aa17.35■□□□□ 0.37
SNRNP200-204ENST00000480615 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
SNRNP200-204ENST00000480615 ATF5Q9Y2D1 282 aaPredicted RBP17.35■□□□□ 0.37
SNRNP200-204ENST00000480615 ZPR1O75312 459 aa17.34■□□□□ 0.37
SNRNP200-204ENST00000480615 VAMP4O75379 141 aa17.34■□□□□ 0.37
SNRNP200-204ENST00000480615 ADRA2BP18089 450 aa17.34■□□□□ 0.37
SNRNP200-204ENST00000480615 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
SNRNP200-204ENST00000480615 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
SNRNP200-204ENST00000480615 USPL1Q5W0Q7 1092 aa17.33■□□□□ 0.37
SNRNP200-204ENST00000480615 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.37
SNRNP200-204ENST00000480615 DDX21Q9NR30 783 aaKnown RBP eCLIP17.33■□□□□ 0.37
SNRNP200-204ENST00000480615 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.37
SNRNP200-204ENST00000480615 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
SNRNP200-204ENST00000480615 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
SNRNP200-204ENST00000480615 ERBB4Q15303 1308 aa17.32■□□□□ 0.36
SNRNP200-204ENST00000480615 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
SNRNP200-204ENST00000480615 A0A087WZG4 1122 aa17.31■□□□□ 0.36
SNRNP200-204ENST00000480615 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
SNRNP200-204ENST00000480615 XAGE3Q8WTP9 111 aa17.31■□□□□ 0.36
SNRNP200-204ENST00000480615 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
SNRNP200-204ENST00000480615 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
SNRNP200-204ENST00000480615 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
SNRNP200-204ENST00000480615 GYS1P13807 737 aa17.3■□□□□ 0.36
SNRNP200-204ENST00000480615 KIF6Q6ZMV9 814 aa17.3■□□□□ 0.36
SNRNP200-204ENST00000480615 BCL2L13Q9BXK5 485 aa17.3■□□□□ 0.36
SNRNP200-204ENST00000480615 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
SNRNP200-204ENST00000480615 FKBP8Q14318 412 aa17.29■□□□□ 0.36
SNRNP200-204ENST00000480615 LRP10Q7Z4F1 713 aa17.29■□□□□ 0.36
SNRNP200-204ENST00000480615 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
SNRNP200-204ENST00000480615 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
SNRNP200-204ENST00000480615 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
SNRNP200-204ENST00000480615 BCORQ6W2J9 1755 aa17.29■□□□□ 0.36
SNRNP200-204ENST00000480615 BICDL1Q6ZP65 573 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms