RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 RGS12O14924 1447 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 MS4A1P11836 297 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 TRIM27P14373 513 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 SBF2Q86WG5 1849 aa22.43■■□□□ 1.18
UPF3A-206ENST00000480362 PANK1Q8TE04 598 aa22.42■■□□□ 1.18
UPF3A-206ENST00000480362 SLC4A9Q96Q91 983 aa22.42■■□□□ 1.18
UPF3A-206ENST00000480362 TEX13AQ9BXU3 409 aaPredicted RBP22.42■■□□□ 1.18
UPF3A-206ENST00000480362 PALLDQ8WX93 1383 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 PTPRCP08575 1304 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 ANXA1P04083 346 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 PDIA6Q15084 440 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 DZIP1LQ8IYY4 767 aaKnown RBP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 CRBNQ96SW2 442 aa22.41■■□□□ 1.18
UPF3A-206ENST00000480362 API5Q9BZZ5 524 aaKnown RBP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 DDX21Q9NR30 783 aaKnown RBP eCLIP22.41■■□□□ 1.18
UPF3A-206ENST00000480362 LAMB4A4D0S4 1761 aa22.4■■□□□ 1.18
UPF3A-206ENST00000480362 CACNA1FO60840 1977 aa22.4■■□□□ 1.18
UPF3A-206ENST00000480362 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-206ENST00000480362 RLBP1P12271 317 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 FLIIQ13045 1269 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 PROSER3Q2NL68 480 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
UPF3A-206ENST00000480362 EXOC6Q8TAG9 804 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 HYPKQ9NX55 129 aa22.39■■□□□ 1.17
UPF3A-206ENST00000480362 BTAF1O14981 1849 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 LOC102724428A0A0B4J2F2 783 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 MYL6BP14649 208 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 SIK1P57059 783 aa22.38■■□□□ 1.17
UPF3A-206ENST00000480362 ERBB4Q15303 1308 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 A1BGP04217 495 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 ATP6V1AP38606 617 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 COG6Q9Y2V7 657 aa22.37■■□□□ 1.17
UPF3A-206ENST00000480362 TRIM37O94972 964 aa22.36■■□□□ 1.17
UPF3A-206ENST00000480362 STARD3NLO95772 234 aa22.36■■□□□ 1.17
UPF3A-206ENST00000480362 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
UPF3A-206ENST00000480362 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF26B4DH59 902 aa22.35■■□□□ 1.17
UPF3A-206ENST00000480362 CYP19A1P11511 503 aaPredicted RBP22.35■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF14Q5TI25 921 aa22.35■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF10Q6P3W6 841 aaKnown RBP22.35■■□□□ 1.17
UPF3A-206ENST00000480362 NBPF15Q8N660 670 aa22.35■■□□□ 1.17
UPF3A-206ENST00000480362 TMEM57Q8N5G2 664 aa22.34■■□□□ 1.17
UPF3A-206ENST00000480362 TJP1Q07157 1748 aa22.34■■□□□ 1.17
UPF3A-206ENST00000480362 ABCC4O15439 1325 aa22.33■■□□□ 1.17
UPF3A-206ENST00000480362 ITPK1Q13572 414 aa22.33■■□□□ 1.17
UPF3A-206ENST00000480362 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.17
UPF3A-206ENST00000480362 F6X3S4 739 aa22.32■■□□□ 1.16
UPF3A-206ENST00000480362 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
UPF3A-206ENST00000480362 MVPQ14764 893 aaKnown RBP22.32■■□□□ 1.16
UPF3A-206ENST00000480362 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
UPF3A-206ENST00000480362 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
UPF3A-206ENST00000480362 ITPRIPQ8IWB1 547 aa22.31■■□□□ 1.16
UPF3A-206ENST00000480362 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 DDX58O95786 925 aaKnown RBP22.29■■□□□ 1.16
UPF3A-206ENST00000480362 KCNQ4P56696 695 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 INTS3Q68E01 1043 aaKnown RBP22.29■■□□□ 1.16
UPF3A-206ENST00000480362 SLC4A10Q6U841 1118 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 ZNF831Q5JPB2 1677 aa22.29■■□□□ 1.16
UPF3A-206ENST00000480362 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
UPF3A-206ENST00000480362 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
UPF3A-206ENST00000480362 CRKLP46109 303 aaKnown RBP22.27■■□□□ 1.16
UPF3A-206ENST00000480362 INTS5Q6P9B9 1019 aaKnown RBP22.27■■□□□ 1.16
UPF3A-206ENST00000480362 DNAAF4Q8WXU2 420 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 PPP4R2Q9NY27 417 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 DDX19BQ9UMR2 479 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 ZBTB1Q9Y2K1 713 aa22.27■■□□□ 1.16
UPF3A-206ENST00000480362 ADCY9O60503 1353 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 LY75O60449 1722 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 CCT4P50991 539 aaKnown RBP22.26■■□□□ 1.15
UPF3A-206ENST00000480362 RIC3Q7Z5B4 369 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 MAP3K2Q9Y2U5 619 aa22.26■■□□□ 1.15
UPF3A-206ENST00000480362 ZNF330Q9Y3S2 320 aaPredicted RBP22.26■■□□□ 1.15
UPF3A-206ENST00000480362 ANKRD13DQ6ZTN6 518 aa22.25■■□□□ 1.15
UPF3A-206ENST00000480362 TTLL7Q6ZT98 887 aa22.24■■□□□ 1.15
UPF3A-206ENST00000480362 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
UPF3A-206ENST00000480362 ZBTB7BO15156 539 aaPredicted RBP22.23■■□□□ 1.15
UPF3A-206ENST00000480362 APBA3O96018 575 aa22.23■■□□□ 1.15
UPF3A-206ENST00000480362 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
UPF3A-206ENST00000480362 PLBD2Q8NHP8 589 aa22.22■■□□□ 1.15
UPF3A-206ENST00000480362 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
UPF3A-206ENST00000480362 PLSCR1O15162 318 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 AAMPQ13685 434 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 RC3H1Q5TC82 1133 aaKnown RBP22.21■■□□□ 1.15
UPF3A-206ENST00000480362 SRCIN1Q9C0H9 1055 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
UPF3A-206ENST00000480362 CNTNAP4Q9C0A0 1308 aa22.21■■□□□ 1.15
UPF3A-206ENST00000480362 RREB1Q92766 1687 aa22.2■■□□□ 1.15
UPF3A-206ENST00000480362 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
UPF3A-206ENST00000480362 SLC27A3Q5K4L6 730 aa22.2■■□□□ 1.14
UPF3A-206ENST00000480362 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
UPF3A-206ENST00000480362 ARXQ96QS3 562 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms