RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 INTS5Q6P9B9 1019 aaKnown RBP26.78■■□□□ 1.88
VARS-224ENST00000479051 AMIGO3Q86WK7 504 aa26.78■■□□□ 1.88
VARS-224ENST00000479051 KDM3BQ7LBC6 1761 aa26.78■■□□□ 1.88
VARS-224ENST00000479051 MYH14Q7Z406 1995 aaKnown RBP26.78■■□□□ 1.88
VARS-224ENST00000479051 RFC4P35249 363 aa26.76■■□□□ 1.87
VARS-224ENST00000479051 SMIM5Q71RC9 77 aa26.76■■□□□ 1.87
VARS-224ENST00000479051 ZBTB1Q9Y2K1 713 aa26.75■■□□□ 1.87
VARS-224ENST00000479051 LAS1LQ9Y4W2 734 aaKnown RBP26.75■■□□□ 1.87
VARS-224ENST00000479051 PTGER2P43116 358 aa26.74■■□□□ 1.87
VARS-224ENST00000479051 EIF4A1P60842 406 aaKnown RBP26.74■■□□□ 1.87
VARS-224ENST00000479051 NCBP3Q53F19 620 aaKnown RBP26.74■■□□□ 1.87
VARS-224ENST00000479051 NPM2Q86SE8 214 aaKnown RBP26.74■■□□□ 1.87
VARS-224ENST00000479051 ARHGEF1Q92888 912 aaKnown RBP26.74■■□□□ 1.87
VARS-224ENST00000479051 SOS1Q07889 1333 aaPredicted RBP26.73■■□□□ 1.87
VARS-224ENST00000479051 CANXP27824 592 aaKnown RBP26.72■■□□□ 1.87
VARS-224ENST00000479051 CCDC27Q2M243 656 aa26.72■■□□□ 1.87
VARS-224ENST00000479051 CHL1O00533 1208 aa26.71■■□□□ 1.87
VARS-224ENST00000479051 MSL1Q68DK7 614 aa26.71■■□□□ 1.87
VARS-224ENST00000479051 CFAP44Q96MT7 982 aa26.71■■□□□ 1.87
VARS-224ENST00000479051 SGIP1Q9BQI5 828 aa26.71■■□□□ 1.87
VARS-224ENST00000479051 GIGYF1O75420 1035 aaPredicted RBP26.7■■□□□ 1.86
VARS-224ENST00000479051 USP16Q9Y5T5 823 aa26.7■■□□□ 1.86
VARS-224ENST00000479051 COL15A1P39059 1388 aa26.7■■□□□ 1.86
VARS-224ENST00000479051 A0A087WZG4 1122 aa26.69■■□□□ 1.86
VARS-224ENST00000479051 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
VARS-224ENST00000479051 GNAI1P63096 354 aa26.69■■□□□ 1.86
VARS-224ENST00000479051 NGEFQ8N5V2 710 aa26.69■■□□□ 1.86
VARS-224ENST00000479051 ARXQ96QS3 562 aa26.69■■□□□ 1.86
VARS-224ENST00000479051 IFT57Q9NWB7 429 aa26.69■■□□□ 1.86
VARS-224ENST00000479051 ZPR1O75312 459 aa26.68■■□□□ 1.86
VARS-224ENST00000479051 IL6STP40189 918 aaPredicted RBP26.68■■□□□ 1.86
VARS-224ENST00000479051 NLGN1Q8N2Q7 840 aa26.68■■□□□ 1.86
VARS-224ENST00000479051 COL24A1Q17RW2 1714 aa26.68■■□□□ 1.86
VARS-224ENST00000479051 LAMB4A4D0S4 1761 aa26.67■■□□□ 1.86
VARS-224ENST00000479051 A1BGP04217 495 aa26.67■■□□□ 1.86
VARS-224ENST00000479051 ZNF330Q9Y3S2 320 aaPredicted RBP26.67■■□□□ 1.86
VARS-224ENST00000479051 USP42Q9H9J4 1324 aaKnown RBP26.66■■□□□ 1.86
VARS-224ENST00000479051 C4AP0C0L4 1744 aa26.66■■□□□ 1.86
VARS-224ENST00000479051 EIF5P55010 431 aaKnown RBP26.66■■□□□ 1.86
VARS-224ENST00000479051 SRCAPQ6ZRS2 3230 aa26.65■■□□□ 1.86
VARS-224ENST00000479051 SENP3-EIF4A1A0A087X0R7 540 aa26.65■■□□□ 1.86
VARS-224ENST00000479051 WWC1Q8IX03 1113 aa26.65■■□□□ 1.86
VARS-224ENST00000479051 ZNF853P0CG23 659 aa26.63■■□□□ 1.85
VARS-224ENST00000479051 GYS1P13807 737 aa26.63■■□□□ 1.85
VARS-224ENST00000479051 MIER1Q8N108 512 aa26.63■■□□□ 1.85
VARS-224ENST00000479051 MBIPQ9NS73 344 aa26.63■■□□□ 1.85
VARS-224ENST00000479051 NARFQ9UHQ1 456 aa26.63■■□□□ 1.85
VARS-224ENST00000479051 SALL2Q9Y467 1007 aaPredicted RBP26.63■■□□□ 1.85
VARS-224ENST00000479051 SRP68Q9UHB9 627 aaKnown RBP26.62■■□□□ 1.85
VARS-224ENST00000479051 USPL1Q5W0Q7 1092 aa26.61■■□□□ 1.85
VARS-224ENST00000479051 IL16Q14005 1332 aa26.61■■□□□ 1.85
VARS-224ENST00000479051 ERBB4Q15303 1308 aa26.61■■□□□ 1.85
VARS-224ENST00000479051 MMP10P09238 476 aa26.59■■□□□ 1.85
VARS-224ENST00000479051 HOXB7P09629 217 aa26.59■■□□□ 1.85
VARS-224ENST00000479051 WDR63Q8IWG1 891 aa26.59■■□□□ 1.85
VARS-224ENST00000479051 EIF2S2P20042 333 aaKnown RBP26.58■■□□□ 1.85
VARS-224ENST00000479051 PIP4K2AP48426 406 aaPredicted RBP26.58■■□□□ 1.85
VARS-224ENST00000479051 KLHL34Q8N239 644 aa26.58■■□□□ 1.85
VARS-224ENST00000479051 FHDC1Q9C0D6 1143 aaPredicted RBP26.58■■□□□ 1.85
VARS-224ENST00000479051 NBPF26B4DH59 902 aa26.57■■□□□ 1.84
VARS-224ENST00000479051 NBPF10Q6P3W6 841 aaKnown RBP26.57■■□□□ 1.84
VARS-224ENST00000479051 DZIP3Q86Y13 1208 aaKnown RBP26.57■■□□□ 1.84
VARS-224ENST00000479051 NBPF15Q8N660 670 aa26.57■■□□□ 1.84
VARS-224ENST00000479051 TBC1D2BQ9UPU7 963 aa26.57■■□□□ 1.84
VARS-224ENST00000479051 FKBP8Q14318 412 aa26.56■■□□□ 1.84
VARS-224ENST00000479051 PARP3Q9Y6F1 533 aa26.56■■□□□ 1.84
VARS-224ENST00000479051 KRT24Q2M2I5 525 aa26.54■■□□□ 1.84
VARS-224ENST00000479051 DUSP27Q5VZP5 1158 aa26.54■■□□□ 1.84
VARS-224ENST00000479051 CHMP4AQ9BY43 222 aa26.54■■□□□ 1.84
VARS-224ENST00000479051 MYL6BP14649 208 aa26.53■■□□□ 1.84
VARS-224ENST00000479051 HDGFL1Q5TGJ6 251 aa26.53■■□□□ 1.84
VARS-224ENST00000479051 SYT17Q9BSW7 474 aa26.53■■□□□ 1.84
VARS-224ENST00000479051 ZNF652Q9Y2D9 606 aa26.53■■□□□ 1.84
VARS-224ENST00000479051 SCN7AQ01118 1682 aa26.52■■□□□ 1.84
VARS-224ENST00000479051 CAMTA2O94983 1202 aa26.51■■□□□ 1.83
VARS-224ENST00000479051 KIF6Q6ZMV9 814 aa26.51■■□□□ 1.83
VARS-224ENST00000479051 TSR2Q969E8 191 aaKnown RBP26.51■■□□□ 1.83
VARS-224ENST00000479051 CD2APQ9Y5K6 639 aa26.51■■□□□ 1.83
VARS-224ENST00000479051 NECTIN2Q92692 538 aa26.5■■□□□ 1.83
VARS-224ENST00000479051 BCL2L12Q9HB09 334 aa26.5■■□□□ 1.83
VARS-224ENST00000479051 RGL2O15211 777 aa26.49■■□□□ 1.83
VARS-224ENST00000479051 NFIXQ14938 502 aa26.49■■□□□ 1.83
VARS-224ENST00000479051 MYH16Q9H6N6 1097 aa26.49■■□□□ 1.83
VARS-224ENST00000479051 DCAF8L1A6NGE4 600 aa26.48■■□□□ 1.83
VARS-224ENST00000479051 TM4SF1P30408 202 aa26.48■■□□□ 1.83
VARS-224ENST00000479051 CLEC4GQ6UXB4 293 aa26.48■■□□□ 1.83
VARS-224ENST00000479051 ELL2O00472 640 aaPredicted RBP26.47■■□□□ 1.83
VARS-224ENST00000479051 GOLGA2Q08379 1002 aa26.47■■□□□ 1.83
VARS-224ENST00000479051 DDX21Q9NR30 783 aaKnown RBP eCLIP26.47■■□□□ 1.83
VARS-224ENST00000479051 DBF4Q9UBU7 674 aaPredicted RBP26.47■■□□□ 1.83
VARS-224ENST00000479051 BCORQ6W2J9 1755 aa26.47■■□□□ 1.83
VARS-224ENST00000479051 FANCIQ9NVI1 1328 aa26.46■■□□□ 1.83
VARS-224ENST00000479051 POLRMTO00411 1230 aaKnown RBP26.46■■□□□ 1.83
VARS-224ENST00000479051 DDR1Q08345 913 aa26.46■■□□□ 1.83
VARS-224ENST00000479051 BICDL1Q6ZP65 573 aa26.46■■□□□ 1.83
VARS-224ENST00000479051 C8orf58Q8NAV2 365 aa26.46■■□□□ 1.83
VARS-224ENST00000479051 ERVV-1B6SEH8 477 aa26.45■■□□□ 1.82
VARS-224ENST00000479051 PDIA6Q15084 440 aa26.45■■□□□ 1.82
VARS-224ENST00000479051 SETDB2Q96T68 719 aa26.45■■□□□ 1.82
VARS-224ENST00000479051 CHPF2Q9P2E5 772 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms