RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 ZNF496Q96IT1 587 aaPredicted RBP30.56■■■□□ 2.48
C9orf3-216ENST00000478603 BRCA1P38398 1863 aaKnown RBP30.56■■■□□ 2.48
C9orf3-216ENST00000478603 ZNF790Q6PG37 636 aa30.55■■■□□ 2.48
C9orf3-216ENST00000478603 BCS1LQ9Y276 419 aa30.55■■■□□ 2.48
C9orf3-216ENST00000478603 C1QTNF8P60827 252 aa30.54■■■□□ 2.48
C9orf3-216ENST00000478603 CEMIPQ8WUJ3 1361 aa30.54■■■□□ 2.48
C9orf3-216ENST00000478603 GIGYF1O75420 1035 aaPredicted RBP30.53■■■□□ 2.48
C9orf3-216ENST00000478603 CANXP27824 592 aaKnown RBP30.53■■■□□ 2.48
C9orf3-216ENST00000478603 POLRMTO00411 1230 aaKnown RBP30.52■■■□□ 2.48
C9orf3-216ENST00000478603 TM4SF1P30408 202 aa30.52■■■□□ 2.48
C9orf3-216ENST00000478603 NARFQ9UHQ1 456 aa30.52■■■□□ 2.48
C9orf3-216ENST00000478603 ADCY9O60503 1353 aa30.52■■■□□ 2.48
C9orf3-216ENST00000478603 HEG1Q9ULI3 1381 aa30.52■■■□□ 2.48
C9orf3-216ENST00000478603 AFDNP55196 1824 aaKnown RBP30.5■■■□□ 2.47
C9orf3-216ENST00000478603 STARD3NLO95772 234 aa30.5■■■□□ 2.47
C9orf3-216ENST00000478603 KCNA3P22001 575 aa30.5■■■□□ 2.47
C9orf3-216ENST00000478603 KCNQ3O43525 872 aa30.49■■■□□ 2.47
C9orf3-216ENST00000478603 FCHSD2O94868 740 aa30.49■■■□□ 2.47
C9orf3-216ENST00000478603 BCL2L12Q9HB09 334 aa30.48■■■□□ 2.47
C9orf3-216ENST00000478603 BTBD11A6QL63 1104 aa30.47■■■□□ 2.47
C9orf3-216ENST00000478603 NFIXQ14938 502 aa30.47■■■□□ 2.47
C9orf3-216ENST00000478603 ZNF526Q8TF50 670 aaPredicted RBP30.47■■■□□ 2.47
C9orf3-216ENST00000478603 MCM10Q7L590 875 aa30.46■■■□□ 2.47
C9orf3-216ENST00000478603 FMNL2Q96PY5 1086 aa30.46■■■□□ 2.47
C9orf3-216ENST00000478603 EIF5P55010 431 aaKnown RBP30.45■■■□□ 2.47
C9orf3-216ENST00000478603 ARFGEF1Q9Y6D6 1849 aa30.45■■■□□ 2.46
C9orf3-216ENST00000478603 CHRNA5P30532 468 aa30.44■■■□□ 2.46
C9orf3-216ENST00000478603 TEX13AQ9BXU3 409 aaPredicted RBP30.44■■■□□ 2.46
C9orf3-216ENST00000478603 GPBP1L1Q9HC44 474 aaPredicted RBP30.44■■■□□ 2.46
C9orf3-216ENST00000478603 DCTN1Q14203 1278 aa30.43■■■□□ 2.46
C9orf3-216ENST00000478603 ARHGAP27Q6ZUM4 889 aa30.43■■■□□ 2.46
C9orf3-216ENST00000478603 RTF1Q92541 710 aaKnown RBP30.43■■■□□ 2.46
C9orf3-216ENST00000478603 PIM2Q9P1W9 311 aa30.43■■■□□ 2.46
C9orf3-216ENST00000478603 NRXN2Q9P2S2 1712 aa30.43■■■□□ 2.46
C9orf3-216ENST00000478603 ZNF330Q9Y3S2 320 aaPredicted RBP30.43■■■□□ 2.46
C9orf3-216ENST00000478603 SENP3-EIF4A1A0A087X0R7 540 aa30.41■■■□□ 2.46
C9orf3-216ENST00000478603 A1BGP04217 495 aa30.41■■■□□ 2.46
C9orf3-216ENST00000478603 A0A087WZG4 1122 aa30.4■■■□□ 2.46
C9orf3-216ENST00000478603 DLG5Q8TDM6 1919 aa30.39■■■□□ 2.46
C9orf3-216ENST00000478603 SERPINB2P05120 415 aa30.39■■■□□ 2.46
C9orf3-216ENST00000478603 BICDL1Q6ZP65 573 aa30.39■■■□□ 2.46
C9orf3-216ENST00000478603 TBC1D2BQ9UPU7 963 aa30.39■■■□□ 2.46
C9orf3-216ENST00000478603 SCN7AQ01118 1682 aa30.39■■■□□ 2.45
C9orf3-216ENST00000478603 DALRD3Q5D0E6 543 aaKnown RBP30.38■■■□□ 2.45
C9orf3-216ENST00000478603 PRAMEF22A3QJZ6 481 aa30.37■■■□□ 2.45
C9orf3-216ENST00000478603 IL6STP40189 918 aaPredicted RBP30.36■■■□□ 2.45
C9orf3-216ENST00000478603 USP16Q9Y5T5 823 aa30.36■■■□□ 2.45
C9orf3-216ENST00000478603 PIP4K2AP48426 406 aaPredicted RBP30.35■■■□□ 2.45
C9orf3-216ENST00000478603 TBC1D9BQ66K14 1250 aa30.35■■■□□ 2.45
C9orf3-216ENST00000478603 HTATSF1O43719 755 aaKnown RBP30.34■■■□□ 2.45
C9orf3-216ENST00000478603 CARMIL3Q8ND23 1372 aa30.33■■■□□ 2.45
C9orf3-216ENST00000478603 DLEC1Q9Y238 1755 aa30.32■■■□□ 2.44
C9orf3-216ENST00000478603 NEFMP07197 916 aa30.31■■■□□ 2.44
C9orf3-216ENST00000478603 PLEKHF1Q96S99 279 aa30.31■■■□□ 2.44
C9orf3-216ENST00000478603 BCORQ6W2J9 1755 aa30.31■■■□□ 2.44
C9orf3-216ENST00000478603 SNRPA1P09661 255 aaKnown RBP30.3■■■□□ 2.44
C9orf3-216ENST00000478603 NPM2Q86SE8 214 aaKnown RBP30.3■■■□□ 2.44
C9orf3-216ENST00000478603 MIS18AQ9NYP9 233 aa30.3■■■□□ 2.44
C9orf3-216ENST00000478603 ANKRD31Q8N7Z5 1873 aa30.29■■■□□ 2.44
C9orf3-216ENST00000478603 CAMTA2O94983 1202 aa30.29■■■□□ 2.44
C9orf3-216ENST00000478603 TAF7Q15545 349 aaPredicted RBP30.29■■■□□ 2.44
C9orf3-216ENST00000478603 C9orf131Q5VYM1 1079 aa30.28■■■□□ 2.44
C9orf3-216ENST00000478603 SBF1O95248 1867 aa30.27■■■□□ 2.44
C9orf3-216ENST00000478603 DZIP3Q86Y13 1208 aaKnown RBP30.27■■■□□ 2.44
C9orf3-216ENST00000478603 C2CD5Q86YS7 1000 aa30.27■■■□□ 2.44
C9orf3-216ENST00000478603 CCDC24Q8N4L8 307 aa30.27■■■□□ 2.44
C9orf3-216ENST00000478603 KIF3CO14782 793 aa30.25■■■□□ 2.43
C9orf3-216ENST00000478603 DDX10Q13206 875 aaKnown RBP30.25■■■□□ 2.43
C9orf3-216ENST00000478603 NFE2L2Q16236 605 aa30.25■■■□□ 2.43
C9orf3-216ENST00000478603 KDM3BQ7LBC6 1761 aa30.25■■■□□ 2.43
C9orf3-216ENST00000478603 PRR5LQ6MZQ0 368 aa30.24■■■□□ 2.43
C9orf3-216ENST00000478603 THUMPD2Q9BTF0 503 aaKnown RBP30.24■■■□□ 2.43
C9orf3-216ENST00000478603 H0YIN7 160 aa30.23■■■□□ 2.43
C9orf3-216ENST00000478603 RALBP1Q15311 655 aa30.23■■■□□ 2.43
C9orf3-216ENST00000478603 NBPF26B4DH59 902 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 NBPF10Q6P3W6 841 aaKnown RBP30.22■■■□□ 2.43
C9orf3-216ENST00000478603 NBPF15Q8N660 670 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 TTLL6Q8N841 843 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 SETDB2Q96T68 719 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 RNF181Q9P0P0 153 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 LAMB4A4D0S4 1761 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 COL11A2P13942 1736 aaPredicted RBP30.22■■■□□ 2.43
C9orf3-216ENST00000478603 MAPK8IP3Q9UPT6 1336 aa30.22■■■□□ 2.43
C9orf3-216ENST00000478603 RASSF7Q02833 373 aa30.2■■■□□ 2.43
C9orf3-216ENST00000478603 BRIP1Q9BX63 1249 aa30.19■■■□□ 2.42
C9orf3-216ENST00000478603 PNNQ9H307 717 aaKnown RBP30.19■■■□□ 2.42
C9orf3-216ENST00000478603 CNBD1Q8NA66 436 aa30.18■■■□□ 2.42
C9orf3-216ENST00000478603 NMRK2Q9NPI5 230 aa30.18■■■□□ 2.42
C9orf3-216ENST00000478603 NPHP1O15259 732 aa30.17■■■□□ 2.42
C9orf3-216ENST00000478603 PNISRQ8TF01 805 aaKnown RBP30.17■■■□□ 2.42
C9orf3-216ENST00000478603 ZNF622Q969S3 477 aaKnown RBP eCLIP30.17■■■□□ 2.42
C9orf3-216ENST00000478603 CCDC88AQ3V6T2 1871 aa30.16■■■□□ 2.42
C9orf3-216ENST00000478603 PDE6BP35913 854 aa30.16■■■□□ 2.42
C9orf3-216ENST00000478603 CACNA1SQ13698 1873 aa30.15■■■□□ 2.42
C9orf3-216ENST00000478603 EIF4A1P60842 406 aaKnown RBP30.14■■■□□ 2.42
C9orf3-216ENST00000478603 CLEC4GQ6UXB4 293 aa30.14■■■□□ 2.42
C9orf3-216ENST00000478603 PRELPP51888 382 aa30.13■■■□□ 2.41
C9orf3-216ENST00000478603 ST5P78524 1137 aa30.13■■■□□ 2.41
C9orf3-216ENST00000478603 ZNF652Q9Y2D9 606 aa30.13■■■□□ 2.41
C9orf3-216ENST00000478603 ZNF219Q9P2Y4 722 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms