RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZBTB1Q9Y2K1 713 aa21.58■■□□□ 1.05
COL1A1-205ENST00000476387 N4BP2Q86UW6 1770 aaPredicted RBP21.58■■□□□ 1.04
COL1A1-205ENST00000476387 COL15A1P39059 1388 aa21.58■■□□□ 1.04
COL1A1-205ENST00000476387 STARD3NLO95772 234 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 DPEP1P16444 411 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 TM4SF1P30408 202 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 USPL1Q5W0Q7 1092 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 ZNF790Q6PG37 636 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 NARFQ9UHQ1 456 aa21.57■■□□□ 1.04
COL1A1-205ENST00000476387 SIPA1L3O60292 1781 aaPredicted RBP21.56■■□□□ 1.04
COL1A1-205ENST00000476387 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
COL1A1-205ENST00000476387 FCHSD2O94868 740 aa21.56■■□□□ 1.04
COL1A1-205ENST00000476387 TEX13AQ9BXU3 409 aaPredicted RBP21.56■■□□□ 1.04
COL1A1-205ENST00000476387 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
COL1A1-205ENST00000476387 BCS1LQ9Y276 419 aa21.55■■□□□ 1.04
COL1A1-205ENST00000476387 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
COL1A1-205ENST00000476387 BRCA1P38398 1863 aaKnown RBP21.54■■□□□ 1.04
COL1A1-205ENST00000476387 KCNA3P22001 575 aa21.53■■□□□ 1.04
COL1A1-205ENST00000476387 A0A087WZG4 1122 aa21.52■■□□□ 1.04
COL1A1-205ENST00000476387 NEFMP07197 916 aa21.52■■□□□ 1.04
COL1A1-205ENST00000476387 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
COL1A1-205ENST00000476387 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
COL1A1-205ENST00000476387 FMNL2Q96PY5 1086 aa21.52■■□□□ 1.04
COL1A1-205ENST00000476387 GPBP1L1Q9HC44 474 aaPredicted RBP21.52■■□□□ 1.04
COL1A1-205ENST00000476387 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
COL1A1-205ENST00000476387 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
COL1A1-205ENST00000476387 NFIXQ14938 502 aa21.51■■□□□ 1.03
COL1A1-205ENST00000476387 MYBBP1AQ9BQG0 1328 aaKnown RBP21.51■■□□□ 1.03
COL1A1-205ENST00000476387 BTBD11A6QL63 1104 aa21.5■■□□□ 1.03
COL1A1-205ENST00000476387 RTF1Q92541 710 aaKnown RBP21.5■■□□□ 1.03
COL1A1-205ENST00000476387 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
COL1A1-205ENST00000476387 HTATSF1O43719 755 aaKnown RBP21.49■■□□□ 1.03
COL1A1-205ENST00000476387 ARFGEF1Q9Y6D6 1849 aa21.48■■□□□ 1.03
COL1A1-205ENST00000476387 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
COL1A1-205ENST00000476387 DALRD3Q5D0E6 543 aaKnown RBP21.48■■□□□ 1.03
COL1A1-205ENST00000476387 ARHGAP27Q6ZUM4 889 aa21.48■■□□□ 1.03
COL1A1-205ENST00000476387 NRXN2Q9P2S2 1712 aa21.48■■□□□ 1.03
COL1A1-205ENST00000476387 IL6STP40189 918 aaPredicted RBP21.47■■□□□ 1.03
COL1A1-205ENST00000476387 PNNQ9H307 717 aaKnown RBP21.46■■□□□ 1.03
COL1A1-205ENST00000476387 KCNQ3O43525 872 aa21.45■■□□□ 1.02
COL1A1-205ENST00000476387 SERPINB2P05120 415 aa21.45■■□□□ 1.02
COL1A1-205ENST00000476387 CHRNA5P30532 468 aa21.45■■□□□ 1.02
COL1A1-205ENST00000476387 MCM10Q7L590 875 aa21.45■■□□□ 1.02
COL1A1-205ENST00000476387 ZNF526Q8TF50 670 aaPredicted RBP21.45■■□□□ 1.02
COL1A1-205ENST00000476387 AFDNP55196 1824 aaKnown RBP21.45■■□□□ 1.02
COL1A1-205ENST00000476387 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
COL1A1-205ENST00000476387 SCN7AQ01118 1682 aa21.44■■□□□ 1.02
COL1A1-205ENST00000476387 A1BGP04217 495 aa21.43■■□□□ 1.02
COL1A1-205ENST00000476387 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
COL1A1-205ENST00000476387 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
COL1A1-205ENST00000476387 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
COL1A1-205ENST00000476387 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
COL1A1-205ENST00000476387 ZNF330Q9Y3S2 320 aaPredicted RBP21.41■■□□□ 1.02
COL1A1-205ENST00000476387 DCTN1Q14203 1278 aa21.4■■□□□ 1.02
COL1A1-205ENST00000476387 TBC1D9BQ66K14 1250 aa21.4■■□□□ 1.02
COL1A1-205ENST00000476387 USP16Q9Y5T5 823 aa21.4■■□□□ 1.02
COL1A1-205ENST00000476387 CARMIL3Q8ND23 1372 aa21.39■■□□□ 1.02
COL1A1-205ENST00000476387 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
COL1A1-205ENST00000476387 C9orf131Q5VYM1 1079 aa21.39■■□□□ 1.01
COL1A1-205ENST00000476387 BICDL1Q6ZP65 573 aa21.39■■□□□ 1.01
COL1A1-205ENST00000476387 DLEC1Q9Y238 1755 aa21.38■■□□□ 1.01
COL1A1-205ENST00000476387 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
COL1A1-205ENST00000476387 KIF3CO14782 793 aa21.38■■□□□ 1.01
COL1A1-205ENST00000476387 CAMTA2O94983 1202 aa21.38■■□□□ 1.01
COL1A1-205ENST00000476387 PLEKHF1Q96S99 279 aa21.38■■□□□ 1.01
COL1A1-205ENST00000476387 PDZRN3Q9UPQ7 1066 aa21.38■■□□□ 1.01
COL1A1-205ENST00000476387 H0YIN7 160 aa21.37■■□□□ 1.01
COL1A1-205ENST00000476387 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.01
COL1A1-205ENST00000476387 NFE2L2Q16236 605 aa21.37■■□□□ 1.01
COL1A1-205ENST00000476387 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
COL1A1-205ENST00000476387 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
COL1A1-205ENST00000476387 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
COL1A1-205ENST00000476387 TTLL6Q8N841 843 aa21.36■■□□□ 1.01
COL1A1-205ENST00000476387 PNISRQ8TF01 805 aaKnown RBP21.36■■□□□ 1.01
COL1A1-205ENST00000476387 SETDB2Q96T68 719 aa21.36■■□□□ 1.01
COL1A1-205ENST00000476387 BRIP1Q9BX63 1249 aa21.36■■□□□ 1.01
COL1A1-205ENST00000476387 CEP350Q5VT06 3117 aa21.35■■□□□ 1.01
COL1A1-205ENST00000476387 RGL2O15211 777 aa21.35■■□□□ 1.01
COL1A1-205ENST00000476387 PRR5LQ6MZQ0 368 aa21.35■■□□□ 1.01
COL1A1-205ENST00000476387 CLEC4GQ6UXB4 293 aa21.35■■□□□ 1.01
COL1A1-205ENST00000476387 BCORQ6W2J9 1755 aa21.35■■□□□ 1.01
COL1A1-205ENST00000476387 KDM3BQ7LBC6 1761 aa21.35■■□□□ 1.01
COL1A1-205ENST00000476387 PDE6BP35913 854 aa21.34■■□□□ 1.01
COL1A1-205ENST00000476387 RNF181Q9P0P0 153 aa21.34■■□□□ 1.01
COL1A1-205ENST00000476387 HSPA6P17066 643 aa21.32■■□□□ 1
COL1A1-205ENST00000476387 PIP4K2AP48426 406 aaPredicted RBP21.32■■□□□ 1
COL1A1-205ENST00000476387 CNBD1Q8NA66 436 aa21.32■■□□□ 1
COL1A1-205ENST00000476387 ZNF652Q9Y2D9 606 aa21.32■■□□□ 1
COL1A1-205ENST00000476387 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
COL1A1-205ENST00000476387 SBF1O95248 1867 aa21.32■■□□□ 1
COL1A1-205ENST00000476387 ANKRD31Q8N7Z5 1873 aa21.32■■□□□ 1
COL1A1-205ENST00000476387 ZC3H4Q9UPT8 1303 aaKnown RBP21.31■■□□□ 1
COL1A1-205ENST00000476387 NBPF26B4DH59 902 aa21.31■■□□□ 1
COL1A1-205ENST00000476387 NBPF10Q6P3W6 841 aaKnown RBP21.31■■□□□ 1
COL1A1-205ENST00000476387 NBPF15Q8N660 670 aa21.31■■□□□ 1
COL1A1-205ENST00000476387 ST5P78524 1137 aa21.3■■□□□ 1
COL1A1-205ENST00000476387 MIS18AQ9NYP9 233 aa21.3■■□□□ 1
COL1A1-205ENST00000476387 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
COL1A1-205ENST00000476387 NPHP1O15259 732 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms