RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
SOD1-204ENST00000476106 TOMM70O94826 608 aa18.03■□□□□ 0.48
SOD1-204ENST00000476106 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
SOD1-204ENST00000476106 PCDH10Q9P2E7 1040 aa18.03■□□□□ 0.48
SOD1-204ENST00000476106 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
SOD1-204ENST00000476106 CCER2I3L3R5 266 aa18.02■□□□□ 0.48
SOD1-204ENST00000476106 JMYQ8N9B5 988 aa18.02■□□□□ 0.48
SOD1-204ENST00000476106 PNPLA7Q6ZV29 1317 aa18.01■□□□□ 0.47
SOD1-204ENST00000476106 KCNQ3O43525 872 aa18.01■□□□□ 0.47
SOD1-204ENST00000476106 ITPK1Q13572 414 aa18.01■□□□□ 0.47
SOD1-204ENST00000476106 KLRG1Q96E93 195 aa18.01■□□□□ 0.47
SOD1-204ENST00000476106 TFCP2L1Q9NZI6 479 aa18.01■□□□□ 0.47
SOD1-204ENST00000476106 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
SOD1-204ENST00000476106 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
SOD1-204ENST00000476106 SLC4A9Q96Q91 983 aa18■□□□□ 0.47
SOD1-204ENST00000476106 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
SOD1-204ENST00000476106 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
SOD1-204ENST00000476106 ZNF790Q6PG37 636 aa17.99■□□□□ 0.47
SOD1-204ENST00000476106 CD2APQ9Y5K6 639 aa17.99■□□□□ 0.47
SOD1-204ENST00000476106 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
SOD1-204ENST00000476106 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
SOD1-204ENST00000476106 AK7Q96M32 723 aa17.98■□□□□ 0.47
SOD1-204ENST00000476106 DNAJC10Q8IXB1 793 aa17.97■□□□□ 0.47
SOD1-204ENST00000476106 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
SOD1-204ENST00000476106 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
SOD1-204ENST00000476106 PHF14O94880 888 aa17.96■□□□□ 0.47
SOD1-204ENST00000476106 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
SOD1-204ENST00000476106 GNPATO15228 680 aa17.95■□□□□ 0.46
SOD1-204ENST00000476106 MSH5O43196 834 aa17.95■□□□□ 0.46
SOD1-204ENST00000476106 FMNL2Q96PY5 1086 aa17.95■□□□□ 0.46
SOD1-204ENST00000476106 WWC3Q9ULE0 1092 aa17.94■□□□□ 0.46
SOD1-204ENST00000476106 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
SOD1-204ENST00000476106 CRKLP46109 303 aaKnown RBP17.93■□□□□ 0.46
SOD1-204ENST00000476106 AMIGO3Q86WK7 504 aa17.91■□□□□ 0.46
SOD1-204ENST00000476106 CNTNAP4Q9C0A0 1308 aa17.91■□□□□ 0.46
SOD1-204ENST00000476106 ZNF330Q9Y3S2 320 aaPredicted RBP17.9■□□□□ 0.46
SOD1-204ENST00000476106 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
SOD1-204ENST00000476106 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
SOD1-204ENST00000476106 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
SOD1-204ENST00000476106 WWC1Q8IX03 1113 aa17.89■□□□□ 0.45
SOD1-204ENST00000476106 RBM46Q8TBY0 533 aaKnown RBP17.89■□□□□ 0.45
SOD1-204ENST00000476106 CCDC87Q9NVE4 849 aa17.89■□□□□ 0.45
SOD1-204ENST00000476106 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
SOD1-204ENST00000476106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.88■□□□□ 0.45
SOD1-204ENST00000476106 CYP19A1P11511 503 aaPredicted RBP17.88■□□□□ 0.45
SOD1-204ENST00000476106 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
SOD1-204ENST00000476106 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
SOD1-204ENST00000476106 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
SOD1-204ENST00000476106 VSIG10Q8N0Z9 540 aa17.88■□□□□ 0.45
SOD1-204ENST00000476106 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
SOD1-204ENST00000476106 ZBTB1Q9Y2K1 713 aa17.88■□□□□ 0.45
SOD1-204ENST00000476106 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
SOD1-204ENST00000476106 STARD3NLO95772 234 aa17.87■□□□□ 0.45
SOD1-204ENST00000476106 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
SOD1-204ENST00000476106 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
SOD1-204ENST00000476106 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
SOD1-204ENST00000476106 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
SOD1-204ENST00000476106 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
SOD1-204ENST00000476106 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 CHL1O00533 1208 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 HMGB2P26583 209 aaKnown RBP17.86■□□□□ 0.45
SOD1-204ENST00000476106 GNAI1P63096 354 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 CCDC27Q2M243 656 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
SOD1-204ENST00000476106 NECTIN2Q92692 538 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 USP16Q9Y5T5 823 aa17.86■□□□□ 0.45
SOD1-204ENST00000476106 A1BGP04217 495 aa17.85■□□□□ 0.45
SOD1-204ENST00000476106 COL15A1P39059 1388 aa17.85■□□□□ 0.45
SOD1-204ENST00000476106 HTRA3P83110 453 aa17.85■□□□□ 0.45
SOD1-204ENST00000476106 FSTL1Q12841 308 aa17.85■□□□□ 0.45
SOD1-204ENST00000476106 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
SOD1-204ENST00000476106 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
SOD1-204ENST00000476106 SSFA2P28290 1259 aa17.84■□□□□ 0.45
SOD1-204ENST00000476106 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
SOD1-204ENST00000476106 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
SOD1-204ENST00000476106 NUP98P52948 1817 aa17.84■□□□□ 0.45
SOD1-204ENST00000476106 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
SOD1-204ENST00000476106 RPS6KA4O75676 772 aa17.83■□□□□ 0.44
SOD1-204ENST00000476106 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
SOD1-204ENST00000476106 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
SOD1-204ENST00000476106 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
SOD1-204ENST00000476106 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
SOD1-204ENST00000476106 FLAD1Q8NFF5 587 aa17.82■□□□□ 0.44
SOD1-204ENST00000476106 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
SOD1-204ENST00000476106 RFC4P35249 363 aa17.81■□□□□ 0.44
SOD1-204ENST00000476106 HNRNPUQ00839 825 aaKnown RBP eCLIP17.81■□□□□ 0.44
SOD1-204ENST00000476106 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
SOD1-204ENST00000476106 SRP68Q9UHB9 627 aaKnown RBP17.81■□□□□ 0.44
SOD1-204ENST00000476106 AFDNP55196 1824 aaKnown RBP17.81■□□□□ 0.44
SOD1-204ENST00000476106 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
SOD1-204ENST00000476106 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
SOD1-204ENST00000476106 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
SOD1-204ENST00000476106 NMRK2Q9NPI5 230 aa17.8■□□□□ 0.44
SOD1-204ENST00000476106 ANKRD36CQ5JPF3 1778 aa17.8■□□□□ 0.44
SOD1-204ENST00000476106 IL16Q14005 1332 aa17.79■□□□□ 0.44
SOD1-204ENST00000476106 HSPA1AP0DMV8 641 aaKnown RBP17.79■□□□□ 0.44
SOD1-204ENST00000476106 HSPA1BP0DMV9 641 aaKnown RBP17.79■□□□□ 0.44
SOD1-204ENST00000476106 MYL6BP14649 208 aa17.79■□□□□ 0.44
SOD1-204ENST00000476106 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms