RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 DPEP1P16444 411 aa17.44■□□□□ 0.38
VSTM4-203ENST00000476018 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
VSTM4-203ENST00000476018 SRP68Q9UHB9 627 aaKnown RBP17.44■□□□□ 0.38
VSTM4-203ENST00000476018 FCHSD2O94868 740 aa17.43■□□□□ 0.38
VSTM4-203ENST00000476018 FKBP8Q14318 412 aa17.43■□□□□ 0.38
VSTM4-203ENST00000476018 INTS5Q6P9B9 1019 aaKnown RBP17.43■□□□□ 0.38
VSTM4-203ENST00000476018 DNAJC10Q8IXB1 793 aa17.43■□□□□ 0.38
VSTM4-203ENST00000476018 BRCA1P38398 1863 aaKnown RBP17.43■□□□□ 0.38
VSTM4-203ENST00000476018 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
VSTM4-203ENST00000476018 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
VSTM4-203ENST00000476018 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
VSTM4-203ENST00000476018 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
VSTM4-203ENST00000476018 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
VSTM4-203ENST00000476018 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
VSTM4-203ENST00000476018 SLC39A6Q13433 755 aa17.41■□□□□ 0.38
VSTM4-203ENST00000476018 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
VSTM4-203ENST00000476018 PIM2Q9P1W9 311 aa17.41■□□□□ 0.38
VSTM4-203ENST00000476018 ARFGEF1Q9Y6D6 1849 aa17.4■□□□□ 0.38
VSTM4-203ENST00000476018 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
VSTM4-203ENST00000476018 DDR1Q08345 913 aa17.4■□□□□ 0.38
VSTM4-203ENST00000476018 CHRDL2Q6WN34 429 aa17.4■□□□□ 0.38
VSTM4-203ENST00000476018 TTC5Q8N0Z6 440 aa17.4■□□□□ 0.38
VSTM4-203ENST00000476018 COL15A1P39059 1388 aa17.4■□□□□ 0.38
VSTM4-203ENST00000476018 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
VSTM4-203ENST00000476018 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
VSTM4-203ENST00000476018 HSPA6P17066 643 aa17.39■□□□□ 0.37
VSTM4-203ENST00000476018 KCNA3P22001 575 aa17.39■□□□□ 0.37
VSTM4-203ENST00000476018 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
VSTM4-203ENST00000476018 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.37
VSTM4-203ENST00000476018 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
VSTM4-203ENST00000476018 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
VSTM4-203ENST00000476018 TM4SF1P30408 202 aa17.38■□□□□ 0.37
VSTM4-203ENST00000476018 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
VSTM4-203ENST00000476018 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
VSTM4-203ENST00000476018 KIF3CO14782 793 aa17.37■□□□□ 0.37
VSTM4-203ENST00000476018 STARD3NLO95772 234 aa17.37■□□□□ 0.37
VSTM4-203ENST00000476018 ZBTB1Q9Y2K1 713 aa17.37■□□□□ 0.37
VSTM4-203ENST00000476018 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
VSTM4-203ENST00000476018 TEFQ10587 303 aa17.36■□□□□ 0.37
VSTM4-203ENST00000476018 CFAP53Q96M91 514 aa17.35■□□□□ 0.37
VSTM4-203ENST00000476018 TEX13AQ9BXU3 409 aaPredicted RBP17.35■□□□□ 0.37
VSTM4-203ENST00000476018 A0A087WZG4 1122 aa17.34■□□□□ 0.37
VSTM4-203ENST00000476018 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
VSTM4-203ENST00000476018 TOMM70O94826 608 aa17.33■□□□□ 0.36
VSTM4-203ENST00000476018 CHRNA5P30532 468 aa17.33■□□□□ 0.36
VSTM4-203ENST00000476018 CNGB1Q14028 1251 aaPredicted RBP17.33■□□□□ 0.36
VSTM4-203ENST00000476018 NFIXQ14938 502 aa17.33■□□□□ 0.36
VSTM4-203ENST00000476018 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
VSTM4-203ENST00000476018 NRXN2Q9P2S2 1712 aa17.33■□□□□ 0.36
VSTM4-203ENST00000476018 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
VSTM4-203ENST00000476018 AFDNP55196 1824 aaKnown RBP17.32■□□□□ 0.36
VSTM4-203ENST00000476018 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
VSTM4-203ENST00000476018 SERPINB2P05120 415 aa17.31■□□□□ 0.36
VSTM4-203ENST00000476018 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
VSTM4-203ENST00000476018 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
VSTM4-203ENST00000476018 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
VSTM4-203ENST00000476018 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
VSTM4-203ENST00000476018 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
VSTM4-203ENST00000476018 APLP1P51693 650 aa17.3■□□□□ 0.36
VSTM4-203ENST00000476018 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
VSTM4-203ENST00000476018 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
VSTM4-203ENST00000476018 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
VSTM4-203ENST00000476018 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
VSTM4-203ENST00000476018 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
VSTM4-203ENST00000476018 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
VSTM4-203ENST00000476018 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
VSTM4-203ENST00000476018 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
VSTM4-203ENST00000476018 BCL2L12Q9HB09 334 aa17.29■□□□□ 0.36
VSTM4-203ENST00000476018 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
VSTM4-203ENST00000476018 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
VSTM4-203ENST00000476018 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
VSTM4-203ENST00000476018 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
VSTM4-203ENST00000476018 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
VSTM4-203ENST00000476018 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
VSTM4-203ENST00000476018 H0YIN7 160 aa17.27■□□□□ 0.36
VSTM4-203ENST00000476018 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
VSTM4-203ENST00000476018 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
VSTM4-203ENST00000476018 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
VSTM4-203ENST00000476018 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.35
VSTM4-203ENST00000476018 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
VSTM4-203ENST00000476018 MKRN4PQ13434 485 aaPredicted RBP17.26■□□□□ 0.35
VSTM4-203ENST00000476018 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
VSTM4-203ENST00000476018 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
VSTM4-203ENST00000476018 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
VSTM4-203ENST00000476018 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
VSTM4-203ENST00000476018 SBF1O95248 1867 aa17.25■□□□□ 0.35
VSTM4-203ENST00000476018 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
VSTM4-203ENST00000476018 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
VSTM4-203ENST00000476018 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
VSTM4-203ENST00000476018 LMNB1P20700 586 aa17.24■□□□□ 0.35
VSTM4-203ENST00000476018 PDE6BP35913 854 aa17.24■□□□□ 0.35
VSTM4-203ENST00000476018 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
VSTM4-203ENST00000476018 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
VSTM4-203ENST00000476018 RASSF7Q02833 373 aa17.23■□□□□ 0.35
VSTM4-203ENST00000476018 FSTL1Q12841 308 aa17.23■□□□□ 0.35
VSTM4-203ENST00000476018 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
VSTM4-203ENST00000476018 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
VSTM4-203ENST00000476018 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
VSTM4-203ENST00000476018 NPHP1O15259 732 aa17.22■□□□□ 0.35
VSTM4-203ENST00000476018 SETDB2Q96T68 719 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms