RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LINC00116Q8NCU8 138 aa19.79■□□□□ 0.76
SNX13-207ENST00000475800 THUMPD2Q9BTF0 503 aaKnown RBP19.79■□□□□ 0.76
SNX13-207ENST00000475800 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
SNX13-207ENST00000475800 UBR3Q6ZT12 1888 aa19.79■□□□□ 0.76
SNX13-207ENST00000475800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
SNX13-207ENST00000475800 CCDC27Q2M243 656 aa19.78■□□□□ 0.76
SNX13-207ENST00000475800 RC3H1Q5TC82 1133 aaKnown RBP19.78■□□□□ 0.76
SNX13-207ENST00000475800 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
SNX13-207ENST00000475800 HEG1Q9ULI3 1381 aa19.78■□□□□ 0.76
SNX13-207ENST00000475800 CNTNAP4Q9C0A0 1308 aa19.77■□□□□ 0.76
SNX13-207ENST00000475800 MYH14Q7Z406 1995 aaKnown RBP19.77■□□□□ 0.76
SNX13-207ENST00000475800 MIER1Q8N108 512 aa19.77■□□□□ 0.76
SNX13-207ENST00000475800 ZNF496Q96IT1 587 aaPredicted RBP19.77■□□□□ 0.76
SNX13-207ENST00000475800 GNPATO15228 680 aa19.76■□□□□ 0.75
SNX13-207ENST00000475800 TSPYL4Q9UJ04 414 aa19.75■□□□□ 0.75
SNX13-207ENST00000475800 KCNQ3O43525 872 aa19.74■□□□□ 0.75
SNX13-207ENST00000475800 STARD3NLO95772 234 aa19.74■□□□□ 0.75
SNX13-207ENST00000475800 DNAJC10Q8IXB1 793 aa19.74■□□□□ 0.75
SNX13-207ENST00000475800 SENP3-EIF4A1A0A087X0R7 540 aa19.73■□□□□ 0.75
SNX13-207ENST00000475800 SNRPA1P09661 255 aaKnown RBP19.73■□□□□ 0.75
SNX13-207ENST00000475800 SSFA2P28290 1259 aa19.73■□□□□ 0.75
SNX13-207ENST00000475800 CRKLP46109 303 aaKnown RBP19.73■□□□□ 0.75
SNX13-207ENST00000475800 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
SNX13-207ENST00000475800 CHL1O00533 1208 aa19.72■□□□□ 0.75
SNX13-207ENST00000475800 CYP19A1P11511 503 aaPredicted RBP19.72■□□□□ 0.75
SNX13-207ENST00000475800 ADRA2BP18089 450 aa19.72■□□□□ 0.75
SNX13-207ENST00000475800 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
SNX13-207ENST00000475800 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
SNX13-207ENST00000475800 LAMB4A4D0S4 1761 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 GRIN3BO60391 1043 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 RPS6KA4O75676 772 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 EIF4A1P60842 406 aaKnown RBP19.71■□□□□ 0.75
SNX13-207ENST00000475800 GNAI1P63096 354 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 CD2APQ9Y5K6 639 aa19.71■□□□□ 0.75
SNX13-207ENST00000475800 C1QTNF8P60827 252 aa19.7■□□□□ 0.74
SNX13-207ENST00000475800 WWC1Q8IX03 1113 aa19.7■□□□□ 0.74
SNX13-207ENST00000475800 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
SNX13-207ENST00000475800 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
SNX13-207ENST00000475800 IL16Q14005 1332 aa19.69■□□□□ 0.74
SNX13-207ENST00000475800 ZNF853P0CG23 659 aa19.68■□□□□ 0.74
SNX13-207ENST00000475800 INTS5Q6P9B9 1019 aaKnown RBP19.68■□□□□ 0.74
SNX13-207ENST00000475800 TRAPPC3LQ5T215 181 aa19.67■□□□□ 0.74
SNX13-207ENST00000475800 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
SNX13-207ENST00000475800 ZNF526Q8TF50 670 aaPredicted RBP19.67■□□□□ 0.74
SNX13-207ENST00000475800 MMP10P09238 476 aa19.65■□□□□ 0.74
SNX13-207ENST00000475800 MBIPQ9NS73 344 aa19.65■□□□□ 0.74
SNX13-207ENST00000475800 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
SNX13-207ENST00000475800 USP16Q9Y5T5 823 aa19.65■□□□□ 0.74
SNX13-207ENST00000475800 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
SNX13-207ENST00000475800 C4AP0C0L4 1744 aa19.65■□□□□ 0.74
SNX13-207ENST00000475800 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
SNX13-207ENST00000475800 A0A087WZG4 1122 aa19.63■□□□□ 0.73
SNX13-207ENST00000475800 HOXB7P09629 217 aa19.63■□□□□ 0.73
SNX13-207ENST00000475800 RFC4P35249 363 aa19.63■□□□□ 0.73
SNX13-207ENST00000475800 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
SNX13-207ENST00000475800 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
SNX13-207ENST00000475800 ATP10DQ9P241 1426 aa19.62■□□□□ 0.73
SNX13-207ENST00000475800 COL15A1P39059 1388 aa19.62■□□□□ 0.73
SNX13-207ENST00000475800 ERBB4Q15303 1308 aa19.62■□□□□ 0.73
SNX13-207ENST00000475800 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
SNX13-207ENST00000475800 CANXP27824 592 aaKnown RBP19.62■□□□□ 0.73
SNX13-207ENST00000475800 ARHGEF1Q92888 912 aaKnown RBP19.62■□□□□ 0.73
SNX13-207ENST00000475800 A1BGP04217 495 aa19.61■□□□□ 0.73
SNX13-207ENST00000475800 EIF5P55010 431 aaKnown RBP19.61■□□□□ 0.73
SNX13-207ENST00000475800 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
SNX13-207ENST00000475800 ZPR1O75312 459 aa19.59■□□□□ 0.73
SNX13-207ENST00000475800 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
SNX13-207ENST00000475800 USP42Q9H9J4 1324 aaKnown RBP19.58■□□□□ 0.73
SNX13-207ENST00000475800 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
SNX13-207ENST00000475800 GPBP1L1Q9HC44 474 aaPredicted RBP19.58■□□□□ 0.72
SNX13-207ENST00000475800 A0A0G2JLW4 131 aa19.57■□□□□ 0.72
SNX13-207ENST00000475800 DUSP27Q5VZP5 1158 aa19.57■□□□□ 0.72
SNX13-207ENST00000475800 NLGN1Q8N2Q7 840 aa19.57■□□□□ 0.72
SNX13-207ENST00000475800 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
SNX13-207ENST00000475800 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
SNX13-207ENST00000475800 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
SNX13-207ENST00000475800 BCS1LQ9Y276 419 aa19.56■□□□□ 0.72
SNX13-207ENST00000475800 ZNF330Q9Y3S2 320 aaPredicted RBP19.56■□□□□ 0.72
SNX13-207ENST00000475800 N4BP2Q86UW6 1770 aaPredicted RBP19.56■□□□□ 0.72
SNX13-207ENST00000475800 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 GYS1P13807 737 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 KRT24Q2M2I5 525 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
SNX13-207ENST00000475800 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
SNX13-207ENST00000475800 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 SCN7AQ01118 1682 aa19.55■□□□□ 0.72
SNX13-207ENST00000475800 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
SNX13-207ENST00000475800 CACNA1FO60840 1977 aa19.54■□□□□ 0.72
SNX13-207ENST00000475800 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
SNX13-207ENST00000475800 BCORQ6W2J9 1755 aa19.54■□□□□ 0.72
SNX13-207ENST00000475800 RGL2O15211 777 aa19.53■□□□□ 0.72
SNX13-207ENST00000475800 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
SNX13-207ENST00000475800 PXDNLA1KZ92 1463 aa19.53■□□□□ 0.72
SNX13-207ENST00000475800 E9PSI1 815 aa19.52■□□□□ 0.72
SNX13-207ENST00000475800 DPEP1P16444 411 aa19.52■□□□□ 0.72
SNX13-207ENST00000475800 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms