RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CLP1Q92989 425 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-215ENST00000475319 GOLGA6L3A6NEY3 463 aa7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 DMTNQ08495 405 aa7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 NCOA4Q13772 614 aa7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 L1TD1Q5T7N2 865 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 ABCC8Q09428 1581 aa7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 TOP2AP11388 1531 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-215ENST00000475319 PPFIA3O75145 1194 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 Q3C1V9 767 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 PLA2G4EQ3MJ16 856 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 MSS51Q4VC12 460 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 CC2D2BQ6DHV5 1058 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 PPP4R2Q9NY27 417 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
ECHDC1-215ENST00000475319 F12P00748 615 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 ZNF16P17020 682 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 ATP2B4P23634 1241 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 SCNN1AP37088 669 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 RNF19BQ6ZMZ0 732 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 DNAJC2Q99543 621 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 BCL2L13Q9BXK5 485 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 YY1AP1Q9H869 796 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 RRAGDQ9NQL2 400 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 PRDM9Q9NQV7 894 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 CEP126Q9P2H0 1117 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 RSF1Q96T23 1441 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 IFT140Q96RY7 1462 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 LETM1O95202 739 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 TERF1P54274 439 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 ANKMY2Q8IV38 441 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 SIRT1Q96EB6 747 aa7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 GTPBP4Q9BZE4 634 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-215ENST00000475319 KCNH2Q12809 1159 aa7.61□□□□□ -1.19
ECHDC1-215ENST00000475319 NBPF20Q3BBV1 942 aa7.61□□□□□ -1.19
ECHDC1-215ENST00000475319 CC2D1BQ5T0F9 858 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-215ENST00000475319 MRPL14Q6P1L8 145 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-215ENST00000475319 TMED8Q6PL24 325 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-215ENST00000475319 BIN2Q9UBW5 565 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-215ENST00000475319 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 EEA1Q15075 1411 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 KRT76Q01546 638 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 DPYDQ12882 1025 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 DNTTIP2Q5QJE6 756 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 FAM43BQ6ZT52 329 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 RNF135Q8IUD6 432 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 PLPP7Q8NBV4 271 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 GIPC2Q8TF65 315 aa7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 FRAT1Q92837 279 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 USB1Q9BQ65 265 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-215ENST00000475319 SOBPA7XYQ1 873 aa7.59□□□□□ -1.19
ECHDC1-215ENST00000475319 PHTF2Q8N3S3 785 aa7.59□□□□□ -1.19
ECHDC1-215ENST00000475319 URB2Q14146 1524 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 MAFGO15525 162 aa7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 RALBP1Q15311 655 aa7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 SWI5Q1ZZU3 235 aa7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 OGFOD1Q8N543 542 aa7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 PRDM2Q13029 1718 aa7.58□□□□□ -1.2
ECHDC1-215ENST00000475319 ANKRD33BA6NCL7 494 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 MAN1A2O60476 641 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 CLDN10P78369 228 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 GPATCH11Q8N954 259 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 PURBQ96QR8 312 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 OCSTAMPQ9BR26 566 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 GEMIN8Q9NWZ8 242 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 PCDHB9Q9Y5E1 797 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 LZTS3O60299 673 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 CTHP32929 405 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 ANAPC15P60006 121 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 SKOR1P84550 965 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 PTPRNQ16849 979 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 EML3Q32P44 896 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 CERS3Q8IU89 383 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 NPAS4Q8IUM7 802 aa7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 ZHX1Q9UKY1 873 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-215ENST00000475319 VGLL3A8MV65 326 aa7.56□□□□□ -1.2
ECHDC1-215ENST00000475319 PRMT3O60678 531 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 PROCP04070 461 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 JUNDP17535 347 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 PTK2Q05397 1052 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 OS9Q13438 667 aaPredicted RBP7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 C1orf216Q8TAB5 229 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 CARD10Q9BWT7 1032 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 PRDM16Q9HAZ2 1276 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 SLC52A1Q9NWF4 448 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 CHIC2Q9UKJ5 165 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 GPSM3Q9Y4H4 160 aa7.55□□□□□ -1.2
ECHDC1-215ENST00000475319 PHF20L1A8MW92 1017 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 TCERG1O14776 1098 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 SIAH2O43255 324 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 ABL1P00519 1130 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 TCF3P15923 654 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms