RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 NLGN1Q8N2Q7 840 aa16.36■□□□□ 0.21
SSR1-205ENST00000475213 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
SSR1-205ENST00000475213 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
SSR1-205ENST00000475213 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.211e-11■□□□□ 8.2
SSR1-205ENST00000475213 TTC5Q8N0Z6 440 aa16.35■□□□□ 0.21
SSR1-205ENST00000475213 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
SSR1-205ENST00000475213 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
SSR1-205ENST00000475213 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
SSR1-205ENST00000475213 SRP68Q9UHB9 627 aaKnown RBP16.34■□□□□ 0.21
SSR1-205ENST00000475213 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
SSR1-205ENST00000475213 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
SSR1-205ENST00000475213 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
SSR1-205ENST00000475213 GRIN3BO60391 1043 aa16.32■□□□□ 0.2
SSR1-205ENST00000475213 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
SSR1-205ENST00000475213 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
SSR1-205ENST00000475213 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
SSR1-205ENST00000475213 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
SSR1-205ENST00000475213 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
SSR1-205ENST00000475213 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
SSR1-205ENST00000475213 FKBP8Q14318 412 aa16.31■□□□□ 0.2
SSR1-205ENST00000475213 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
SSR1-205ENST00000475213 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
SSR1-205ENST00000475213 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
SSR1-205ENST00000475213 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
SSR1-205ENST00000475213 RALBP1Q15311 655 aa16.3■□□□□ 0.2
SSR1-205ENST00000475213 MCM10Q7L590 875 aa16.3■□□□□ 0.2
SSR1-205ENST00000475213 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
SSR1-205ENST00000475213 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 COL15A1P39059 1388 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 KCNQ3O43525 872 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 ZPR1O75312 459 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 STARD3NLO95772 234 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 ZNF784Q8NCA9 323 aaPredicted RBP16.29■□□□□ 0.2
SSR1-205ENST00000475213 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
SSR1-205ENST00000475213 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
SSR1-205ENST00000475213 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
SSR1-205ENST00000475213 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
SSR1-205ENST00000475213 POTEHQ6S545 545 aa16.28■□□□□ 0.2
SSR1-205ENST00000475213 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
SSR1-205ENST00000475213 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
SSR1-205ENST00000475213 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
SSR1-205ENST00000475213 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
SSR1-205ENST00000475213 TGFB2P61812 414 aa16.27■□□□□ 0.2
SSR1-205ENST00000475213 DDR1Q08345 913 aa16.27■□□□□ 0.2
SSR1-205ENST00000475213 NARFQ9UHQ1 456 aa16.27■□□□□ 0.2
SSR1-205ENST00000475213 NEFMP07197 916 aa16.26■□□□□ 0.19
SSR1-205ENST00000475213 TM4SF1P30408 202 aa16.26■□□□□ 0.19
SSR1-205ENST00000475213 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
SSR1-205ENST00000475213 BRCA1P38398 1863 aaKnown RBP16.26■□□□□ 0.19
SSR1-205ENST00000475213 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
SSR1-205ENST00000475213 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
SSR1-205ENST00000475213 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
SSR1-205ENST00000475213 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
SSR1-205ENST00000475213 BCL2L12Q9HB09 334 aa16.24■□□□□ 0.19
SSR1-205ENST00000475213 A1BGP04217 495 aa16.23■□□□□ 0.19
SSR1-205ENST00000475213 DPEP1P16444 411 aa16.23■□□□□ 0.19
SSR1-205ENST00000475213 NFIXQ14938 502 aa16.23■□□□□ 0.19
SSR1-205ENST00000475213 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
SSR1-205ENST00000475213 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
SSR1-205ENST00000475213 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
SSR1-205ENST00000475213 MYBBP1AQ9BQG0 1328 aaKnown RBP16.22■□□□□ 0.19
SSR1-205ENST00000475213 A0A087WZG4 1122 aa16.22■□□□□ 0.19
SSR1-205ENST00000475213 PRAMEF22A3QJZ6 481 aa16.22■□□□□ 0.19
SSR1-205ENST00000475213 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
SSR1-205ENST00000475213 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
SSR1-205ENST00000475213 MAPK8IP3Q9UPT6 1336 aa16.21■□□□□ 0.19
SSR1-205ENST00000475213 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
SSR1-205ENST00000475213 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
SSR1-205ENST00000475213 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
SSR1-205ENST00000475213 KCNA3P22001 575 aa16.21■□□□□ 0.19
SSR1-205ENST00000475213 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
SSR1-205ENST00000475213 ZNF330Q9Y3S2 320 aaPredicted RBP16.21■□□□□ 0.19
SSR1-205ENST00000475213 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
SSR1-205ENST00000475213 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
SSR1-205ENST00000475213 BCS1LQ9Y276 419 aa16.2■□□□□ 0.18
SSR1-205ENST00000475213 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
SSR1-205ENST00000475213 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
SSR1-205ENST00000475213 SERPINB2P05120 415 aa16.18■□□□□ 0.18
SSR1-205ENST00000475213 PIP4K2AP48426 406 aaPredicted RBP16.18■□□□□ 0.18
SSR1-205ENST00000475213 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
SSR1-205ENST00000475213 NPM2Q86SE8 214 aaKnown RBP16.18■□□□□ 0.18
SSR1-205ENST00000475213 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
SSR1-205ENST00000475213 CAMTA2O94983 1202 aa16.17■□□□□ 0.18
SSR1-205ENST00000475213 CHRNA5P30532 468 aa16.17■□□□□ 0.18
SSR1-205ENST00000475213 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
SSR1-205ENST00000475213 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
SSR1-205ENST00000475213 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
SSR1-205ENST00000475213 RIPK4P57078 832 aa16.16■□□□□ 0.18
SSR1-205ENST00000475213 PRKRIP1Q9H875 184 aaPredicted RBP16.16■□□□□ 0.18
SSR1-205ENST00000475213 ADCY9O60503 1353 aa16.15■□□□□ 0.18
SSR1-205ENST00000475213 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
SSR1-205ENST00000475213 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
SSR1-205ENST00000475213 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
SSR1-205ENST00000475213 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
SSR1-205ENST00000475213 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
SSR1-205ENST00000475213 ANKRD31Q8N7Z5 1873 aa16.14■□□□□ 0.17
SSR1-205ENST00000475213 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
SSR1-205ENST00000475213 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
SSR1-205ENST00000475213 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms