RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 PDGFDQ9GZP0 370 aaPredicted RBP29.77■■■□□ 2.36
YIF1A-206ENST00000474986 IL16Q14005 1332 aa29.76■■■□□ 2.36
YIF1A-206ENST00000474986 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.35
YIF1A-206ENST00000474986 LAS1LQ9Y4W2 734 aaKnown RBP29.76■■■□□ 2.35
YIF1A-206ENST00000474986 TUBGCP6Q96RT7 1819 aa29.75■■■□□ 2.35
YIF1A-206ENST00000474986 GIGYF1O75420 1035 aaPredicted RBP29.75■■■□□ 2.35
YIF1A-206ENST00000474986 UBR3Q6ZT12 1888 aa29.75■■■□□ 2.35
YIF1A-206ENST00000474986 AMIGO3Q86WK7 504 aa29.75■■■□□ 2.35
YIF1A-206ENST00000474986 WDR63Q8IWG1 891 aa29.74■■■□□ 2.35
YIF1A-206ENST00000474986 MTFR1LQ9H019 292 aa29.74■■■□□ 2.35
YIF1A-206ENST00000474986 SENP3-EIF4A1A0A087X0R7 540 aa29.73■■■□□ 2.35
YIF1A-206ENST00000474986 PHF14O94880 888 aa29.73■■■□□ 2.35
YIF1A-206ENST00000474986 TRAPPC3LQ5T215 181 aa29.73■■■□□ 2.35
YIF1A-206ENST00000474986 USP16Q9Y5T5 823 aa29.73■■■□□ 2.35
YIF1A-206ENST00000474986 MYH14Q7Z406 1995 aaKnown RBP29.73■■■□□ 2.35
YIF1A-206ENST00000474986 ZBTB1Q9Y2K1 713 aa29.72■■■□□ 2.35
YIF1A-206ENST00000474986 SOS1Q07889 1333 aaPredicted RBP29.71■■■□□ 2.35
YIF1A-206ENST00000474986 PRAMEF22A3QJZ6 481 aa29.71■■■□□ 2.35
YIF1A-206ENST00000474986 MBIPQ9NS73 344 aa29.71■■■□□ 2.35
YIF1A-206ENST00000474986 MSH5O43196 834 aa29.7■■■□□ 2.35
YIF1A-206ENST00000474986 SPON1Q9HCB6 807 aa29.7■■■□□ 2.35
YIF1A-206ENST00000474986 SALL2Q9Y467 1007 aaPredicted RBP29.7■■■□□ 2.35
YIF1A-206ENST00000474986 ZBTB7AO95365 584 aa29.68■■■□□ 2.34
YIF1A-206ENST00000474986 ARHGEF1Q92888 912 aaKnown RBP29.68■■■□□ 2.34
YIF1A-206ENST00000474986 A1BGP04217 495 aa29.67■■■□□ 2.34
YIF1A-206ENST00000474986 HOXB7P09629 217 aa29.67■■■□□ 2.34
YIF1A-206ENST00000474986 IL6STP40189 918 aaPredicted RBP29.67■■■□□ 2.34
YIF1A-206ENST00000474986 SMIM5Q71RC9 77 aa29.67■■■□□ 2.34
YIF1A-206ENST00000474986 ZNF521Q96K83 1311 aa29.67■■■□□ 2.34
YIF1A-206ENST00000474986 CANXP27824 592 aaKnown RBP29.66■■■□□ 2.34
YIF1A-206ENST00000474986 EIF5P55010 431 aaKnown RBP29.66■■■□□ 2.34
YIF1A-206ENST00000474986 RFC4P35249 363 aa29.65■■■□□ 2.34
YIF1A-206ENST00000474986 COL15A1P39059 1388 aa29.64■■■□□ 2.34
YIF1A-206ENST00000474986 LRP5O75197 1615 aa29.64■■■□□ 2.34
YIF1A-206ENST00000474986 ERBB4Q15303 1308 aa29.64■■■□□ 2.34
YIF1A-206ENST00000474986 LAMB4A4D0S4 1761 aa29.64■■■□□ 2.34
YIF1A-206ENST00000474986 A0A087WZG4 1122 aa29.63■■■□□ 2.33
YIF1A-206ENST00000474986 ATF5Q9Y2D1 282 aaPredicted RBP29.62■■■□□ 2.33
YIF1A-206ENST00000474986 KRT24Q2M2I5 525 aa29.61■■■□□ 2.33
YIF1A-206ENST00000474986 NPM2Q86SE8 214 aaKnown RBP29.61■■■□□ 2.33
YIF1A-206ENST00000474986 SGIP1Q9BQI5 828 aa29.61■■■□□ 2.33
YIF1A-206ENST00000474986 USP42Q9H9J4 1324 aaKnown RBP29.61■■■□□ 2.33
YIF1A-206ENST00000474986 PTGER2P43116 358 aa29.6■■■□□ 2.33
YIF1A-206ENST00000474986 NBPF26B4DH59 902 aa29.59■■■□□ 2.33
YIF1A-206ENST00000474986 NBPF10Q6P3W6 841 aaKnown RBP29.59■■■□□ 2.33
YIF1A-206ENST00000474986 NBPF15Q8N660 670 aa29.59■■■□□ 2.33
YIF1A-206ENST00000474986 ZPR1O75312 459 aa29.58■■■□□ 2.33
YIF1A-206ENST00000474986 DUSP27Q5VZP5 1158 aa29.58■■■□□ 2.33
YIF1A-206ENST00000474986 TSR2Q969E8 191 aaKnown RBP29.58■■■□□ 2.33
YIF1A-206ENST00000474986 MYH16Q9H6N6 1097 aa29.58■■■□□ 2.33
YIF1A-206ENST00000474986 NARFQ9UHQ1 456 aa29.58■■■□□ 2.33
YIF1A-206ENST00000474986 FANCIQ9NVI1 1328 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 GYS1P13807 737 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 POLD1P28340 1107 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 NLGN1Q8N2Q7 840 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 CHMP4AQ9BY43 222 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 C4AP0C0L4 1744 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 COL24A1Q17RW2 1714 aa29.57■■■□□ 2.32
YIF1A-206ENST00000474986 EIF2S2P20042 333 aaKnown RBP29.56■■■□□ 2.32
YIF1A-206ENST00000474986 PIP4K2AP48426 406 aaPredicted RBP29.55■■■□□ 2.32
YIF1A-206ENST00000474986 GOLGA2Q08379 1002 aa29.55■■■□□ 2.32
YIF1A-206ENST00000474986 MSL1Q68DK7 614 aa29.55■■■□□ 2.32
YIF1A-206ENST00000474986 SRP68Q9UHB9 627 aaKnown RBP29.55■■■□□ 2.32
YIF1A-206ENST00000474986 ZNF330Q9Y3S2 320 aaPredicted RBP29.55■■■□□ 2.32
YIF1A-206ENST00000474986 HDGFL1Q5TGJ6 251 aa29.54■■■□□ 2.32
YIF1A-206ENST00000474986 SPINK5Q9NQ38 1064 aaPredicted RBP29.54■■■□□ 2.32
YIF1A-206ENST00000474986 C8orf58Q8NAV2 365 aa29.53■■■□□ 2.32
YIF1A-206ENST00000474986 E9PSI1 815 aa29.52■■■□□ 2.32
YIF1A-206ENST00000474986 RGL2O15211 777 aa29.52■■■□□ 2.32
YIF1A-206ENST00000474986 PDIA6Q15084 440 aa29.52■■■□□ 2.32
YIF1A-206ENST00000474986 USPL1Q5W0Q7 1092 aa29.52■■■□□ 2.32
YIF1A-206ENST00000474986 DZIP3Q86Y13 1208 aaKnown RBP29.52■■■□□ 2.32
YIF1A-206ENST00000474986 DDX21Q9NR30 783 aaKnown RBP eCLIP29.51■■■□□ 2.31
YIF1A-206ENST00000474986 ARXQ96QS3 562 aa29.5■■■□□ 2.31
YIF1A-206ENST00000474986 TBC1D2BQ9UPU7 963 aa29.5■■■□□ 2.31
YIF1A-206ENST00000474986 ELL2O00472 640 aaPredicted RBP29.49■■■□□ 2.31
YIF1A-206ENST00000474986 CAMTA2O94983 1202 aa29.49■■■□□ 2.31
YIF1A-206ENST00000474986 MYL6BP14649 208 aa29.49■■■□□ 2.31
YIF1A-206ENST00000474986 LRP10Q7Z4F1 713 aa29.49■■■□□ 2.31
YIF1A-206ENST00000474986 DBF4Q9UBU7 674 aaPredicted RBP29.49■■■□□ 2.31
YIF1A-206ENST00000474986 PPP1R1BQ9UD71 204 aaPredicted RBP29.49■■■□□ 2.31
YIF1A-206ENST00000474986 FKBP8Q14318 412 aa29.48■■■□□ 2.31
YIF1A-206ENST00000474986 TWISTNBQ3B726 338 aaPredicted RBP29.48■■■□□ 2.31
YIF1A-206ENST00000474986 TSPYL6Q8N831 410 aa29.48■■■□□ 2.31
YIF1A-206ENST00000474986 BCL2L12Q9HB09 334 aa29.48■■■□□ 2.31
YIF1A-206ENST00000474986 NECTIN2Q92692 538 aa29.47■■■□□ 2.31
YIF1A-206ENST00000474986 MMP10P09238 476 aa29.46■■■□□ 2.31
YIF1A-206ENST00000474986 HNRNPUQ00839 825 aaKnown RBP eCLIP29.46■■■□□ 2.31
YIF1A-206ENST00000474986 SLFN5Q08AF3 891 aa29.46■■■□□ 2.31
YIF1A-206ENST00000474986 CCDC30Q5VVM6 783 aa29.46■■■□□ 2.31
YIF1A-206ENST00000474986 CLEC4GQ6UXB4 293 aa29.46■■■□□ 2.31
YIF1A-206ENST00000474986 CHPF2Q9P2E5 772 aa29.46■■■□□ 2.31
YIF1A-206ENST00000474986 PROSER3Q2NL68 480 aa29.45■■■□□ 2.31
YIF1A-206ENST00000474986 SCN7AQ01118 1682 aa29.44■■■□□ 2.3
YIF1A-206ENST00000474986 ERVV-1B6SEH8 477 aa29.44■■■□□ 2.3
YIF1A-206ENST00000474986 EXOSC9Q06265 439 aaKnown RBP29.44■■■□□ 2.3
YIF1A-206ENST00000474986 HYPKQ9NX55 129 aa29.44■■■□□ 2.3
YIF1A-206ENST00000474986 ZNF652Q9Y2D9 606 aa29.44■■■□□ 2.3
YIF1A-206ENST00000474986 TM4SF1P30408 202 aa29.43■■■□□ 2.3
YIF1A-206ENST00000474986 KIF6Q6ZMV9 814 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms