RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.41
APTX-219ENST00000474658 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
APTX-219ENST00000474658 INTS5Q6P9B9 1019 aaKnown RBP12.46□□□□□ -0.41
APTX-219ENST00000474658 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
APTX-219ENST00000474658 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
APTX-219ENST00000474658 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
APTX-219ENST00000474658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
APTX-219ENST00000474658 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
APTX-219ENST00000474658 SSFA2P28290 1259 aa12.45□□□□□ -0.42
APTX-219ENST00000474658 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
APTX-219ENST00000474658 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
APTX-219ENST00000474658 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
APTX-219ENST00000474658 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
APTX-219ENST00000474658 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
APTX-219ENST00000474658 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
APTX-219ENST00000474658 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
APTX-219ENST00000474658 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
APTX-219ENST00000474658 EIF4A1P60842 406 aaKnown RBP12.44□□□□□ -0.42
APTX-219ENST00000474658 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
APTX-219ENST00000474658 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
APTX-219ENST00000474658 MTFR1LQ9H019 292 aa12.44□□□□□ -0.42
APTX-219ENST00000474658 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
APTX-219ENST00000474658 CCDC87Q9NVE4 849 aa12.44□□□□□ -0.42
APTX-219ENST00000474658 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
APTX-219ENST00000474658 CHL1O00533 1208 aa12.43□□□□□ -0.42
APTX-219ENST00000474658 CAPN15O75808 1086 aa12.43□□□□□ -0.42
APTX-219ENST00000474658 STARD3NLO95772 234 aa12.43□□□□□ -0.42
APTX-219ENST00000474658 TRAPPC3LQ5T215 181 aa12.43□□□□□ -0.42
APTX-219ENST00000474658 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
APTX-219ENST00000474658 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
APTX-219ENST00000474658 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
APTX-219ENST00000474658 SRCAPQ6ZRS2 3230 aa12.42□□□□□ -0.42
APTX-219ENST00000474658 A1BGP04217 495 aa12.42□□□□□ -0.42
APTX-219ENST00000474658 CANXP27824 592 aaKnown RBP12.42□□□□□ -0.42
APTX-219ENST00000474658 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
APTX-219ENST00000474658 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
APTX-219ENST00000474658 ZBTB1Q9Y2K1 713 aa12.42□□□□□ -0.42
APTX-219ENST00000474658 LRP5O75197 1615 aa12.41□□□□□ -0.42
APTX-219ENST00000474658 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
APTX-219ENST00000474658 PTGER2P43116 358 aa12.41□□□□□ -0.42
APTX-219ENST00000474658 CALD1Q05682 793 aaKnown RBP12.41□□□□□ -0.42
APTX-219ENST00000474658 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
APTX-219ENST00000474658 SOS1Q07889 1333 aaPredicted RBP12.4□□□□□ -0.42
APTX-219ENST00000474658 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
APTX-219ENST00000474658 RFC4P35249 363 aa12.4□□□□□ -0.42
APTX-219ENST00000474658 MSL1Q68DK7 614 aa12.4□□□□□ -0.42
APTX-219ENST00000474658 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
APTX-219ENST00000474658 IFT57Q9NWB7 429 aa12.4□□□□□ -0.42
APTX-219ENST00000474658 PIP4K2AP48426 406 aaPredicted RBP12.39□□□□□ -0.43
APTX-219ENST00000474658 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
APTX-219ENST00000474658 GNAI1P63096 354 aa12.39□□□□□ -0.43
APTX-219ENST00000474658 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
APTX-219ENST00000474658 MBIPQ9NS73 344 aa12.39□□□□□ -0.43
APTX-219ENST00000474658 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
APTX-219ENST00000474658 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
APTX-219ENST00000474658 PPP1R1BQ9UD71 204 aaPredicted RBP12.38□□□□□ -0.43
APTX-219ENST00000474658 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
APTX-219ENST00000474658 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
APTX-219ENST00000474658 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
APTX-219ENST00000474658 GYS1P13807 737 aa12.37□□□□□ -0.43
APTX-219ENST00000474658 POLD1P28340 1107 aa12.37□□□□□ -0.43
APTX-219ENST00000474658 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
APTX-219ENST00000474658 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
APTX-219ENST00000474658 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
APTX-219ENST00000474658 COL15A1P39059 1388 aa12.37□□□□□ -0.43
APTX-219ENST00000474658 LAMB4A4D0S4 1761 aa12.37□□□□□ -0.43
APTX-219ENST00000474658 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
APTX-219ENST00000474658 DSG3P32926 999 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 ARXQ96QS3 562 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 NARFQ9UHQ1 456 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 IL16Q14005 1332 aa12.36□□□□□ -0.43
APTX-219ENST00000474658 USP42Q9H9J4 1324 aaKnown RBP12.36□□□□□ -0.43
APTX-219ENST00000474658 A0A087WZG4 1122 aa12.35□□□□□ -0.43
APTX-219ENST00000474658 ZPR1O75312 459 aa12.35□□□□□ -0.43
APTX-219ENST00000474658 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
APTX-219ENST00000474658 NLGN1Q8N2Q7 840 aa12.35□□□□□ -0.43
APTX-219ENST00000474658 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
APTX-219ENST00000474658 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
APTX-219ENST00000474658 ELL2O00472 640 aaPredicted RBP12.34□□□□□ -0.43
APTX-219ENST00000474658 FKBP8Q14318 412 aa12.34□□□□□ -0.43
APTX-219ENST00000474658 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
APTX-219ENST00000474658 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
APTX-219ENST00000474658 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
APTX-219ENST00000474658 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
APTX-219ENST00000474658 BCL2L12Q9HB09 334 aa12.34□□□□□ -0.43
APTX-219ENST00000474658 MMP10P09238 476 aa12.33□□□□□ -0.44
APTX-219ENST00000474658 MYL6BP14649 208 aa12.33□□□□□ -0.44
APTX-219ENST00000474658 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
APTX-219ENST00000474658 ANXA1P04083 346 aa12.32□□□□□ -0.44
APTX-219ENST00000474658 HOXB7P09629 217 aa12.32□□□□□ -0.44
APTX-219ENST00000474658 PDIA6Q15084 440 aa12.32□□□□□ -0.44
APTX-219ENST00000474658 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
APTX-219ENST00000474658 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
APTX-219ENST00000474658 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
APTX-219ENST00000474658 CAMTA2O94983 1202 aa12.31□□□□□ -0.44
APTX-219ENST00000474658 TM4SF1P30408 202 aa12.31□□□□□ -0.44
APTX-219ENST00000474658 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms