RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 USP42Q9H9J4 1324 aaKnown RBP26.64■■□□□ 1.85
HLA-B-252ENST00000474381 RIPK4P57078 832 aa26.63■■□□□ 1.85
HLA-B-252ENST00000474381 CD2APQ9Y5K6 639 aa26.62■■□□□ 1.85
HLA-B-252ENST00000474381 KLHL34Q8N239 644 aa26.61■■□□□ 1.85
HLA-B-252ENST00000474381 COL15A1P39059 1388 aa26.6■■□□□ 1.85
HLA-B-252ENST00000474381 ANP32CO43423 234 aa26.6■■□□□ 1.85
HLA-B-252ENST00000474381 MMP10P09238 476 aa26.6■■□□□ 1.85
HLA-B-252ENST00000474381 SNRPA1P09661 255 aaKnown RBP26.6■■□□□ 1.85
HLA-B-252ENST00000474381 CCDC146Q8IYE0 955 aa26.6■■□□□ 1.85
HLA-B-252ENST00000474381 DLG5Q8TDM6 1919 aa26.6■■□□□ 1.85
HLA-B-252ENST00000474381 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
HLA-B-252ENST00000474381 THUMPD2Q9BTF0 503 aaKnown RBP26.58■■□□□ 1.85
HLA-B-252ENST00000474381 ZPR1O75312 459 aa26.57■■□□□ 1.84
HLA-B-252ENST00000474381 CANXP27824 592 aaKnown RBP26.57■■□□□ 1.84
HLA-B-252ENST00000474381 EIF5P55010 431 aaKnown RBP26.57■■□□□ 1.84
HLA-B-252ENST00000474381 SRP68Q9UHB9 627 aaKnown RBP26.57■■□□□ 1.84
HLA-B-252ENST00000474381 NARFQ9UHQ1 456 aa26.57■■□□□ 1.84
HLA-B-252ENST00000474381 IL6STP40189 918 aaPredicted RBP26.56■■□□□ 1.84
HLA-B-252ENST00000474381 BABAM1Q9NWV8 329 aa26.56■■□□□ 1.84
HLA-B-252ENST00000474381 A0A087WZG4 1122 aa26.55■■□□□ 1.84
HLA-B-252ENST00000474381 NLGN2Q8NFZ4 835 aa26.55■■□□□ 1.84
HLA-B-252ENST00000474381 MIS18AQ9NYP9 233 aa26.55■■□□□ 1.84
HLA-B-252ENST00000474381 USP16Q9Y5T5 823 aa26.55■■□□□ 1.84
HLA-B-252ENST00000474381 RRP7AQ9Y3A4 280 aaKnown RBP26.54■■□□□ 1.84
HLA-B-252ENST00000474381 FKBP8Q14318 412 aa26.53■■□□□ 1.84
HLA-B-252ENST00000474381 A1BGP04217 495 aa26.52■■□□□ 1.84
HLA-B-252ENST00000474381 EIF4A1P60842 406 aaKnown RBP26.52■■□□□ 1.84
HLA-B-252ENST00000474381 USPL1Q5W0Q7 1092 aa26.52■■□□□ 1.84
HLA-B-252ENST00000474381 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
HLA-B-252ENST00000474381 KDM3BQ7LBC6 1761 aa26.51■■□□□ 1.83
HLA-B-252ENST00000474381 PRAMEF22A3QJZ6 481 aa26.51■■□□□ 1.83
HLA-B-252ENST00000474381 NEUROD2Q15784 382 aa26.51■■□□□ 1.83
HLA-B-252ENST00000474381 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
HLA-B-252ENST00000474381 TRIM35Q9UPQ4 493 aa26.51■■□□□ 1.83
HLA-B-252ENST00000474381 CCDC184Q52MB2 194 aa26.5■■□□□ 1.83
HLA-B-252ENST00000474381 TSPYL4Q9UJ04 414 aa26.5■■□□□ 1.83
HLA-B-252ENST00000474381 GIGYF1O75420 1035 aaPredicted RBP26.49■■□□□ 1.83
HLA-B-252ENST00000474381 TM4SF1P30408 202 aa26.49■■□□□ 1.83
HLA-B-252ENST00000474381 C10orf71Q711Q0 1435 aa26.48■■□□□ 1.83
HLA-B-252ENST00000474381 GPR162Q16538 588 aa26.47■■□□□ 1.83
HLA-B-252ENST00000474381 BCL2L12Q9HB09 334 aa26.47■■□□□ 1.83
HLA-B-252ENST00000474381 DDR1Q08345 913 aa26.46■■□□□ 1.83
HLA-B-252ENST00000474381 MRS2Q9HD23 443 aa26.46■■□□□ 1.83
HLA-B-252ENST00000474381 ZNF330Q9Y3S2 320 aaPredicted RBP26.46■■□□□ 1.83
HLA-B-252ENST00000474381 POLRMTO00411 1230 aaKnown RBP26.45■■□□□ 1.82
HLA-B-252ENST00000474381 APAF1O14727 1248 aa26.45■■□□□ 1.82
HLA-B-252ENST00000474381 TGFB2P61812 414 aa26.45■■□□□ 1.82
HLA-B-252ENST00000474381 CHL1O00533 1208 aa26.43■■□□□ 1.82
HLA-B-252ENST00000474381 NFIXQ14938 502 aa26.43■■□□□ 1.82
HLA-B-252ENST00000474381 TBC1D2BQ9UPU7 963 aa26.43■■□□□ 1.82
HLA-B-252ENST00000474381 NBPF26B4DH59 902 aa26.42■■□□□ 1.82
HLA-B-252ENST00000474381 RGL2O15211 777 aa26.42■■□□□ 1.82
HLA-B-252ENST00000474381 NBPF10Q6P3W6 841 aaKnown RBP26.42■■□□□ 1.82
HLA-B-252ENST00000474381 DZIP3Q86Y13 1208 aaKnown RBP26.42■■□□□ 1.82
HLA-B-252ENST00000474381 NBPF15Q8N660 670 aa26.42■■□□□ 1.82
HLA-B-252ENST00000474381 LAMB4A4D0S4 1761 aa26.42■■□□□ 1.82
HLA-B-252ENST00000474381 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
HLA-B-252ENST00000474381 SCN7AQ01118 1682 aa26.41■■□□□ 1.82
HLA-B-252ENST00000474381 ERBB4Q15303 1308 aa26.4■■□□□ 1.82
HLA-B-252ENST00000474381 KIF13BQ9NQT8 1826 aa26.4■■□□□ 1.82
HLA-B-252ENST00000474381 PIP4K2AP48426 406 aaPredicted RBP26.4■■□□□ 1.82
HLA-B-252ENST00000474381 CALD1Q05682 793 aaKnown RBP26.4■■□□□ 1.82
HLA-B-252ENST00000474381 PELP1Q8IZL8 1130 aaKnown RBP26.4■■□□□ 1.82
HLA-B-252ENST00000474381 PXDNLA1KZ92 1463 aa26.4■■□□□ 1.82
HLA-B-252ENST00000474381 GRIN3BO60391 1043 aa26.39■■□□□ 1.82
HLA-B-252ENST00000474381 CLEC4GQ6UXB4 293 aa26.39■■□□□ 1.82
HLA-B-252ENST00000474381 CFAP44Q96MT7 982 aa26.39■■□□□ 1.82
HLA-B-252ENST00000474381 YBX3P16989 372 aaKnown RBP eCLIP26.38■■□□□ 1.81
HLA-B-252ENST00000474381 UTRNP46939 3433 aa26.37■■□□□ 1.81
HLA-B-252ENST00000474381 SERPINB2P05120 415 aa26.37■■□□□ 1.81
HLA-B-252ENST00000474381 ZNF652Q9Y2D9 606 aa26.37■■□□□ 1.81
HLA-B-252ENST00000474381 GOLGB1Q14789 3259 aaKnown RBP26.36■■□□□ 1.81
HLA-B-252ENST00000474381 NCBP3Q53F19 620 aaKnown RBP26.36■■□□□ 1.81
HLA-B-252ENST00000474381 TBC1D9BQ66K14 1250 aa26.36■■□□□ 1.81
HLA-B-252ENST00000474381 LAS1LQ9Y4W2 734 aaKnown RBP26.36■■□□□ 1.81
HLA-B-252ENST00000474381 CARMIL3Q8ND23 1372 aa26.35■■□□□ 1.81
HLA-B-252ENST00000474381 YY1P25490 414 aa26.35■■□□□ 1.81
HLA-B-252ENST00000474381 ZNF853P0CG23 659 aa26.34■■□□□ 1.81
HLA-B-252ENST00000474381 CCDC27Q2M243 656 aa26.34■■□□□ 1.81
HLA-B-252ENST00000474381 IFT57Q9NWB7 429 aa26.34■■□□□ 1.81
HLA-B-252ENST00000474381 NRXN2Q9P2S2 1712 aa26.34■■□□□ 1.81
HLA-B-252ENST00000474381 A0A0G2JLW4 131 aa26.33■■□□□ 1.81
HLA-B-252ENST00000474381 HOXB7P09629 217 aa26.33■■□□□ 1.81
HLA-B-252ENST00000474381 GNAI1P63096 354 aa26.33■■□□□ 1.81
HLA-B-252ENST00000474381 BICDL1Q6ZP65 573 aa26.33■■□□□ 1.81
HLA-B-252ENST00000474381 SETDB2Q96T68 719 aa26.33■■□□□ 1.81
HLA-B-252ENST00000474381 KIAA1551Q9HCM1 1747 aa26.33■■□□□ 1.81
HLA-B-252ENST00000474381 BCORQ6W2J9 1755 aa26.33■■□□□ 1.8
HLA-B-252ENST00000474381 DPEP1P16444 411 aa26.32■■□□□ 1.8
HLA-B-252ENST00000474381 ERVV-1B6SEH8 477 aa26.3■■□□□ 1.8
HLA-B-252ENST00000474381 MBIPQ9NS73 344 aa26.3■■□□□ 1.8
HLA-B-252ENST00000474381 MYL6BP14649 208 aa26.29■■□□□ 1.8
HLA-B-252ENST00000474381 EIF2S2P20042 333 aaKnown RBP26.29■■□□□ 1.8
HLA-B-252ENST00000474381 KCNA3P22001 575 aa26.29■■□□□ 1.8
HLA-B-252ENST00000474381 PDIA6Q15084 440 aa26.28■■□□□ 1.8
HLA-B-252ENST00000474381 KIF6Q6ZMV9 814 aa26.28■■□□□ 1.8
HLA-B-252ENST00000474381 MAP3K15Q6ZN16 1313 aa26.28■■□□□ 1.8
HLA-B-252ENST00000474381 KRT24Q2M2I5 525 aa26.27■■□□□ 1.8
HLA-B-252ENST00000474381 LRP10Q7Z4F1 713 aa26.27■■□□□ 1.8
HLA-B-252ENST00000474381 PIM2Q9P1W9 311 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms