RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SBNO2Q9Y2G9 1366 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 ZNF500O60304 480 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 HSP90AA2PQ14568 343 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 VPS72Q15906 364 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 DPH6Q7L8W6 267 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 ARHGEF10LQ9HCE6 1279 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 FAN1Q9Y2M0 1017 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 MAST1Q9Y2H9 1570 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 CASZ1Q86V15 1759 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 IGBP1P78318 339 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 C4orf46Q504U0 113 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 DDX46Q7L014 1031 aaKnown RBP7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 GET4Q7L5D6 327 aaPredicted RBP7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 GNL3LQ9NVN8 582 aaKnown RBP7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 FMN1Q68DA7 1419 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 TCERG1O14776 1098 aaKnown RBP7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 SEMA3FQ13275 785 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 HSP90AB3PQ58FF7 597 aa7.69□□□□□ -1.18
SMARCE1-208ENST00000474246 RPGRIP1LQ68CZ1 1315 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 CACNA1AO00555 2505 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 WDHD1O75717 1129 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 LTKP29376 864 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 C3orf67Q6ZVT6 689 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 USTQ9Y2C2 406 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 NCOA2Q15596 1464 aa7.68□□□□□ -1.18
SMARCE1-208ENST00000474246 hCG_2014768A0A024R1R8 64 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 BDNFP23560 247 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 FAM196AQ6ZSG2 479 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 SNRNP27Q8WVK2 155 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 SENP7Q9BQF6 1050 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 PRDM4Q9UKN5 801 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 PLA2G5P39877 138 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 GYS2P54840 703 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 NAALADL2Q58DX5 795 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 NOP9Q86U38 636 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 LARGE2Q8N3Y3 721 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 CEP126Q9P2H0 1117 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 TMA7Q9Y2S6 64 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 KIF27Q86VH2 1401 aa7.67□□□□□ -1.18
SMARCE1-208ENST00000474246 CROCC2H7BZ55 1655 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 TRIM37O94972 964 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 SCP2P22307 547 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 PSME1Q06323 249 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 NEUROD1Q13562 356 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 CREBRFQ8IUR6 639 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 COL26A1Q96A83 441 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 FAM122AQ96E09 287 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 FXR1P51114 621 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 LBX1P52954 281 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 ZNF830Q96NB3 372 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 CHPF2Q9P2E5 772 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 SWAP70Q9UH65 585 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 SLIT1O75093 1534 aa7.66□□□□□ -1.18
SMARCE1-208ENST00000474246 ANP32AP39687 249 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-208ENST00000474246 PPP4CP60510 307 aa7.65□□□□□ -1.18
SMARCE1-208ENST00000474246 C11orf96Q7Z7L8 435 aa7.65□□□□□ -1.18
SMARCE1-208ENST00000474246 GOPCQ9HD26 462 aa7.65□□□□□ -1.18
SMARCE1-208ENST00000474246 FBXO9Q9UK97 447 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-208ENST00000474246 ZNF16P17020 682 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 SMYD5Q6GMV2 418 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 PRDM6Q9NQX0 595 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 NEXMIFQ5QGS0 1516 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 MTA1Q13330 715 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 PTPROQ16827 1216 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 PUS10Q3MIT2 529 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 CCAR1Q8IX12 1150 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 SCYL1Q96KG9 808 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 GABBR1Q9UBS5 961 aa7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 TPX2Q9ULW0 747 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-208ENST00000474246 SLIT2O94813 1529 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 PDIA6Q15084 440 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 NBPF6Q5VWK0 638 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 ANKRD23Q86SG2 305 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 NBPF5PQ86XG9 351 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 KCNB2Q92953 911 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 NBPF4Q96M43 638 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 TMX4Q9H1E5 349 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 RPRD2Q5VT52 1461 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 ERBB3P21860 1342 aa7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 PPEF1O14829 653 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-208ENST00000474246 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.192e-7■■□□□ 12.5
SMARCE1-208ENST00000474246 DCCP43146 1447 aa7.62□□□□□ -1.19
SMARCE1-208ENST00000474246 CFAP69A5D8W1 941 aa7.62□□□□□ -1.19
SMARCE1-208ENST00000474246 HSP90AA1P07900 732 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-208ENST00000474246 SSR1P43307 286 aaKnown RBP7.62□□□□□ -1.19
SMARCE1-208ENST00000474246 TMEM131LA2VDJ0 1609 aa7.62□□□□□ -1.19
SMARCE1-208ENST00000474246 CENPJQ9HC77 1338 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-208ENST00000474246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 SMC1BQ8NDV3 1235 aa7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 ATL2Q8NHH9 583 aa7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-208ENST00000474246 KIDINS220Q9ULH0 1771 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms