RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
SRCAP-204ENST00000474008 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.2
SRCAP-204ENST00000474008 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
SRCAP-204ENST00000474008 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.19
SRCAP-204ENST00000474008 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
SRCAP-204ENST00000474008 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
SRCAP-204ENST00000474008 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
SRCAP-204ENST00000474008 CHRNA5P30532 468 aa16.26■□□□□ 0.19
SRCAP-204ENST00000474008 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
SRCAP-204ENST00000474008 NMRK2Q9NPI5 230 aa16.26■□□□□ 0.19
SRCAP-204ENST00000474008 FCHSD2O94868 740 aa16.25■□□□□ 0.19
SRCAP-204ENST00000474008 HSPA6P17066 643 aa16.25■□□□□ 0.19
SRCAP-204ENST00000474008 TGFB2P61812 414 aa16.25■□□□□ 0.19
SRCAP-204ENST00000474008 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
SRCAP-204ENST00000474008 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
SRCAP-204ENST00000474008 CCER1Q8TC90 406 aaPredicted RBP16.24■□□□□ 0.19
SRCAP-204ENST00000474008 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
SRCAP-204ENST00000474008 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
SRCAP-204ENST00000474008 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
SRCAP-204ENST00000474008 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
SRCAP-204ENST00000474008 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
SRCAP-204ENST00000474008 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
SRCAP-204ENST00000474008 PCNTO95613 3336 aa16.23■□□□□ 0.19
SRCAP-204ENST00000474008 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
SRCAP-204ENST00000474008 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
SRCAP-204ENST00000474008 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
SRCAP-204ENST00000474008 HTRA3P83110 453 aa16.22■□□□□ 0.19
SRCAP-204ENST00000474008 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
SRCAP-204ENST00000474008 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
SRCAP-204ENST00000474008 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
SRCAP-204ENST00000474008 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
SRCAP-204ENST00000474008 POLRMTO00411 1230 aaKnown RBP16.21■□□□□ 0.19
SRCAP-204ENST00000474008 RNMTO43148 476 aaKnown RBP16.21■□□□□ 0.19
SRCAP-204ENST00000474008 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.19
SRCAP-204ENST00000474008 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
SRCAP-204ENST00000474008 TM4SF1P30408 202 aa16.2■□□□□ 0.18
SRCAP-204ENST00000474008 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
SRCAP-204ENST00000474008 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
SRCAP-204ENST00000474008 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
SRCAP-204ENST00000474008 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
SRCAP-204ENST00000474008 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
SRCAP-204ENST00000474008 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
SRCAP-204ENST00000474008 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
SRCAP-204ENST00000474008 PRELPP51888 382 aa16.18■□□□□ 0.18
SRCAP-204ENST00000474008 NFIXQ14938 502 aa16.18■□□□□ 0.18
SRCAP-204ENST00000474008 IFFO2Q5TF58 517 aa16.18■□□□□ 0.18
SRCAP-204ENST00000474008 PIM2Q9P1W9 311 aa16.18■□□□□ 0.18
SRCAP-204ENST00000474008 TJP1Q07157 1748 aa16.18■□□□□ 0.18
SRCAP-204ENST00000474008 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
SRCAP-204ENST00000474008 RASSF7Q02833 373 aa16.17■□□□□ 0.18
SRCAP-204ENST00000474008 DALRD3Q5D0E6 543 aaKnown RBP16.17■□□□□ 0.18
SRCAP-204ENST00000474008 KCPQ6ZWJ8 1503 aa16.17■□□□□ 0.18
SRCAP-204ENST00000474008 ZNF831Q5JPB2 1677 aa16.16■□□□□ 0.18
SRCAP-204ENST00000474008 ADAMTS7Q9UKP4 1686 aa16.16■□□□□ 0.18
SRCAP-204ENST00000474008 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
SRCAP-204ENST00000474008 DNAJC5GQ8N7S2 189 aa16.16■□□□□ 0.18
SRCAP-204ENST00000474008 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
SRCAP-204ENST00000474008 ZPR1O75312 459 aa16.14■□□□□ 0.17
SRCAP-204ENST00000474008 TOMM70O94826 608 aa16.14■□□□□ 0.17
SRCAP-204ENST00000474008 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
SRCAP-204ENST00000474008 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
SRCAP-204ENST00000474008 RRAGCQ9HB90 399 aa16.14■□□□□ 0.17
SRCAP-204ENST00000474008 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
SRCAP-204ENST00000474008 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
SRCAP-204ENST00000474008 KCNQ3O43525 872 aa16.13■□□□□ 0.17
SRCAP-204ENST00000474008 DIAPH1O60610 1272 aaKnown RBP16.13■□□□□ 0.17
SRCAP-204ENST00000474008 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
SRCAP-204ENST00000474008 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
SRCAP-204ENST00000474008 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
SRCAP-204ENST00000474008 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
SRCAP-204ENST00000474008 SCN11AQ9UI33 1791 aa16.12■□□□□ 0.17
SRCAP-204ENST00000474008 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
SRCAP-204ENST00000474008 COL15A1P39059 1388 aa16.12■□□□□ 0.17
SRCAP-204ENST00000474008 SERPINB2P05120 415 aa16.11■□□□□ 0.17
SRCAP-204ENST00000474008 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
SRCAP-204ENST00000474008 U2SURPO15042 1029 aaKnown RBP16.1■□□□□ 0.17
SRCAP-204ENST00000474008 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
SRCAP-204ENST00000474008 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
SRCAP-204ENST00000474008 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
SRCAP-204ENST00000474008 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
SRCAP-204ENST00000474008 MRC1P22897 1456 aa16.1■□□□□ 0.17
SRCAP-204ENST00000474008 APLP1P51693 650 aa16.09■□□□□ 0.17
SRCAP-204ENST00000474008 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
SRCAP-204ENST00000474008 ZNF330Q9Y3S2 320 aaPredicted RBP16.09■□□□□ 0.17
SRCAP-204ENST00000474008 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
SRCAP-204ENST00000474008 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
SRCAP-204ENST00000474008 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.16
SRCAP-204ENST00000474008 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
SRCAP-204ENST00000474008 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.16
SRCAP-204ENST00000474008 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
SRCAP-204ENST00000474008 A1BGP04217 495 aa16.07■□□□□ 0.16
SRCAP-204ENST00000474008 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
SRCAP-204ENST00000474008 NFKBIEO00221 500 aa16.05■□□□□ 0.16
SRCAP-204ENST00000474008 ZNF790Q6PG37 636 aa16.05■□□□□ 0.16
SRCAP-204ENST00000474008 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
SRCAP-204ENST00000474008 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
SRCAP-204ENST00000474008 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
SRCAP-204ENST00000474008 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
SRCAP-204ENST00000474008 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
SRCAP-204ENST00000474008 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms