RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 BCL2L12Q9HB09 334 aa15.22■□□□□ 0.03
ACTB-209ENST00000473257 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
ACTB-209ENST00000473257 MRC1P22897 1456 aa15.21■□□□□ 0.03
ACTB-209ENST00000473257 PER1O15534 1290 aaPredicted RBP15.21■□□□□ 0.03
ACTB-209ENST00000473257 CANXP27824 592 aaKnown RBP15.21■□□□□ 0.03
ACTB-209ENST00000473257 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
ACTB-209ENST00000473257 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
ACTB-209ENST00000473257 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
ACTB-209ENST00000473257 BICDL1Q6ZP65 573 aa15.2■□□□□ 0.02
ACTB-209ENST00000473257 CCDC24Q8N4L8 307 aa15.2■□□□□ 0.02
ACTB-209ENST00000473257 COL15A1P39059 1388 aa15.2■□□□□ 0.02
ACTB-209ENST00000473257 CARMIL3Q8ND23 1372 aa15.2■□□□□ 0.02
ACTB-209ENST00000473257 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
ACTB-209ENST00000473257 U2SURPO15042 1029 aaKnown RBP15.19■□□□□ 0.02
ACTB-209ENST00000473257 TOMM70O94826 608 aa15.19■□□□□ 0.02
ACTB-209ENST00000473257 PRELPP51888 382 aa15.19■□□□□ 0.02
ACTB-209ENST00000473257 AFDNP55196 1824 aaKnown RBP15.19■□□□□ 0.02
ACTB-209ENST00000473257 RRAGCQ9HB90 399 aa15.18■□□□□ 0.02
ACTB-209ENST00000473257 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
ACTB-209ENST00000473257 PCNTO95613 3336 aa15.18■□□□□ 0.02
ACTB-209ENST00000473257 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
ACTB-209ENST00000473257 SERPINB2P05120 415 aa15.17■□□□□ 0.02
ACTB-209ENST00000473257 DNAJC5GQ8N7S2 189 aa15.17■□□□□ 0.02
ACTB-209ENST00000473257 IL17REQ8NFR9 667 aa15.17■□□□□ 0.02
ACTB-209ENST00000473257 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
ACTB-209ENST00000473257 KCNQ3O43525 872 aa15.16■□□□□ 0.02
ACTB-209ENST00000473257 APLP1P51693 650 aa15.16■□□□□ 0.02
ACTB-209ENST00000473257 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
ACTB-209ENST00000473257 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
ACTB-209ENST00000473257 C2CD5Q86YS7 1000 aa15.15■□□□□ 0.02
ACTB-209ENST00000473257 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
ACTB-209ENST00000473257 SBF1O95248 1867 aa15.14■□□□□ 0.01
ACTB-209ENST00000473257 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
ACTB-209ENST00000473257 PIP4K2AP48426 406 aaPredicted RBP15.14■□□□□ 0.01
ACTB-209ENST00000473257 TBC1D9BQ66K14 1250 aa15.14■□□□□ 0.01
ACTB-209ENST00000473257 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
ACTB-209ENST00000473257 A1BGP04217 495 aa15.13■□□□□ 0.01
ACTB-209ENST00000473257 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
ACTB-209ENST00000473257 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
ACTB-209ENST00000473257 TTC5Q8N0Z6 440 aa15.13■□□□□ 0.01
ACTB-209ENST00000473257 NRXN2Q9P2S2 1712 aa15.12■□□□□ 0.01
ACTB-209ENST00000473257 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
ACTB-209ENST00000473257 TEFQ10587 303 aa15.12■□□□□ 0.01
ACTB-209ENST00000473257 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
ACTB-209ENST00000473257 RBM46Q8TBY0 533 aaKnown RBP15.12■□□□□ 0.01
ACTB-209ENST00000473257 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 NFKBIEO00221 500 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 STARD3NLO95772 234 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 KDM2BQ8NHM5 1336 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
ACTB-209ENST00000473257 PRKAR2BP31323 418 aa15.1■□□□□ 0.01
ACTB-209ENST00000473257 ZNF622Q969S3 477 aaKnown RBP eCLIP15.1■□□□□ 0.01
ACTB-209ENST00000473257 ANKRD31Q8N7Z5 1873 aa15.1■□□□□ 0.01
ACTB-209ENST00000473257 WDR90Q96KV7 1748 aa15.09■□□□□ 0.01
ACTB-209ENST00000473257 H0YIN7 160 aa15.09■□□□□ 0.01
ACTB-209ENST00000473257 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
ACTB-209ENST00000473257 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
ACTB-209ENST00000473257 SIPA1L3O60292 1781 aaPredicted RBP15.08■□□□□ 0.01
ACTB-209ENST00000473257 DLEC1Q9Y238 1755 aa15.08■□□□□ 0.01
ACTB-209ENST00000473257 C21orf2O43822 256 aa15.08■□□□□ 0
ACTB-209ENST00000473257 LMNB1P20700 586 aa15.08■□□□□ 0
ACTB-209ENST00000473257 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0
ACTB-209ENST00000473257 COL11A2P13942 1736 aaPredicted RBP15.08■□□□□ 0
ACTB-209ENST00000473257 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0
ACTB-209ENST00000473257 CAMTA2O94983 1202 aa15.07■□□□□ 0
ACTB-209ENST00000473257 DCTN1Q14203 1278 aa15.07■□□□□ 0
ACTB-209ENST00000473257 MCM10Q7L590 875 aa15.07■□□□□ 0
ACTB-209ENST00000473257 USP16Q9Y5T5 823 aa15.07■□□□□ 0
ACTB-209ENST00000473257 SCN7AQ01118 1682 aa15.06■□□□□ 0
ACTB-209ENST00000473257 A0A087WZG4 1122 aa15.06■□□□□ 0
ACTB-209ENST00000473257 BTBD11A6QL63 1104 aa15.06■□□□□ 0
ACTB-209ENST00000473257 FSTL1Q12841 308 aa15.06■□□□□ 0
ACTB-209ENST00000473257 FMNL2Q96PY5 1086 aa15.06■□□□□ 0
ACTB-209ENST00000473257 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
ACTB-209ENST00000473257 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
ACTB-209ENST00000473257 GLTPD2A6NH11 291 aa15.05■□□□□ -0
ACTB-209ENST00000473257 POTECB2RU33 542 aa15.05■□□□□ -0
ACTB-209ENST00000473257 KLRG1Q96E93 195 aa15.05■□□□□ -0
ACTB-209ENST00000473257 CEMIPQ8WUJ3 1361 aa15.05■□□□□ -0
ACTB-209ENST00000473257 NPC1L1Q9UHC9 1359 aa15.05■□□□□ -0
ACTB-209ENST00000473257 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
ACTB-209ENST00000473257 IL6STP40189 918 aaPredicted RBP15.04■□□□□ -0
ACTB-209ENST00000473257 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -03e-42■□□□□ 8.5
ACTB-209ENST00000473257 DZIP3Q86Y13 1208 aaKnown RBP15.04■□□□□ -0
ACTB-209ENST00000473257 BRIP1Q9BX63 1249 aa15.04■□□□□ -0
ACTB-209ENST00000473257 FAM177BA6PVY3 158 aa15.03■□□□□ -0
ACTB-209ENST00000473257 NPHP1O15259 732 aa15.03■□□□□ -0
ACTB-209ENST00000473257 OLFM4Q6UX06 510 aa15.03■□□□□ -0
ACTB-209ENST00000473257 CNBD1Q8NA66 436 aa15.03■□□□□ -0
ACTB-209ENST00000473257 SMC1BQ8NDV3 1235 aa15.03■□□□□ -0
ACTB-209ENST00000473257 SETDB2Q96T68 719 aa15.03■□□□□ -0
ACTB-209ENST00000473257 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
ACTB-209ENST00000473257 SLX4Q8IY92 1834 aa15.03■□□□□ -0
ACTB-209ENST00000473257 CACNA1SQ13698 1873 aa15.02■□□□□ -0
ACTB-209ENST00000473257 VEGFAP15692 232 aaPredicted RBP15.02■□□□□ -0
ACTB-209ENST00000473257 PPP2R1AP30153 589 aa15.02■□□□□ -0
ACTB-209ENST00000473257 PDE6BP35913 854 aa15.02■□□□□ -0
ACTB-209ENST00000473257 COL13A1Q5TAT6 717 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms