RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 FAM181BA6NEQ2 426 aa11.38□□□□□ -0.59
SCAF4-205ENST00000472318 GPC1P35052 558 aa11.38□□□□□ -0.59
SCAF4-205ENST00000472318 CYP2U1Q7Z449 544 aa11.38□□□□□ -0.59
SCAF4-205ENST00000472318 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
SCAF4-205ENST00000472318 GPR161Q8N6U8 529 aaKnown RBP11.38□□□□□ -0.59
SCAF4-205ENST00000472318 CEP126Q9P2H0 1117 aa11.38□□□□□ -0.59
SCAF4-205ENST00000472318 ATP10AO60312 1499 aa11.38□□□□□ -0.59
SCAF4-205ENST00000472318 KRT76Q01546 638 aa11.37□□□□□ -0.59
SCAF4-205ENST00000472318 OSBPL3Q9H4L5 887 aa11.37□□□□□ -0.59
SCAF4-205ENST00000472318 C9orf84Q5VXU9 1444 aa11.36□□□□□ -0.59
SCAF4-205ENST00000472318 A0A1W2PRU2 124 aa11.36□□□□□ -0.59
SCAF4-205ENST00000472318 MCM6Q14566 821 aa11.36□□□□□ -0.59
SCAF4-205ENST00000472318 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCAF4-205ENST00000472318 CLN3Q13286 438 aa11.35□□□□□ -0.59
SCAF4-205ENST00000472318 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
SCAF4-205ENST00000472318 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
SCAF4-205ENST00000472318 MEN1O00255 615 aa11.34□□□□□ -0.59
SCAF4-205ENST00000472318 PRICKLE2Q7Z3G6 844 aa11.33□□□□□ -0.6
SCAF4-205ENST00000472318 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
SCAF4-205ENST00000472318 CAMSAP1Q5T5Y3 1602 aa11.33□□□□□ -0.6
SCAF4-205ENST00000472318 SCAPERQ9BY12 1400 aa11.33□□□□□ -0.6
SCAF4-205ENST00000472318 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
SCAF4-205ENST00000472318 SETD1BQ9UPS6 1966 aaKnown RBP11.31□□□□□ -0.6
SCAF4-205ENST00000472318 TOM1O60784 492 aa11.31□□□□□ -0.6
SCAF4-205ENST00000472318 VWA5B2Q8N398 1253 aa11.31□□□□□ -0.6
SCAF4-205ENST00000472318 PHTF2Q8N3S3 785 aa11.31□□□□□ -0.6
SCAF4-205ENST00000472318 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-205ENST00000472318 COL25A1Q9BXS0 654 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-205ENST00000472318 CDC14CA4D256 554 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 RHOQP17081 205 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 CNTNAP3BQ96NU0 1288 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 CNTNAP3Q9BZ76 1288 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
SCAF4-205ENST00000472318 GNRH1P01148 92 aa11.29□□□□□ -0.6
SCAF4-205ENST00000472318 ABL2P42684 1182 aa11.29□□□□□ -0.6
SCAF4-205ENST00000472318 VAC14Q08AM6 782 aa11.29□□□□□ -0.6
SCAF4-205ENST00000472318 ESF1Q9H501 851 aaKnown RBP11.29□□□□□ -0.6
SCAF4-205ENST00000472318 CUEDC1Q9NWM3 386 aaPredicted RBP11.29□□□□□ -0.6
SCAF4-205ENST00000472318 C3P01024 1663 aa11.29□□□□□ -0.6
SCAF4-205ENST00000472318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCAF4-205ENST00000472318 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-205ENST00000472318 POTEAQ6S8J7 498 aa11.28□□□□□ -0.6
SCAF4-205ENST00000472318 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
SCAF4-205ENST00000472318 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
SCAF4-205ENST00000472318 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
SCAF4-205ENST00000472318 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.6
SCAF4-205ENST00000472318 PLEKHD1A6NEE1 506 aa11.27□□□□□ -0.61
SCAF4-205ENST00000472318 SPATA31C2B4DYI2 1134 aa11.27□□□□□ -0.61
SCAF4-205ENST00000472318 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
SCAF4-205ENST00000472318 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
SCAF4-205ENST00000472318 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
SCAF4-205ENST00000472318 DOLKQ9UPQ8 538 aa11.27□□□□□ -0.61
SCAF4-205ENST00000472318 IL2RAP01589 272 aa11.26□□□□□ -0.61
SCAF4-205ENST00000472318 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
SCAF4-205ENST00000472318 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
SCAF4-205ENST00000472318 DYRK1BQ9Y463 629 aa11.26□□□□□ -0.61
SCAF4-205ENST00000472318 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
SCAF4-205ENST00000472318 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
SCAF4-205ENST00000472318 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
SCAF4-205ENST00000472318 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
SCAF4-205ENST00000472318 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
SCAF4-205ENST00000472318 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
SCAF4-205ENST00000472318 HRH3Q9Y5N1 445 aa11.25□□□□□ -0.61
SCAF4-205ENST00000472318 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
SCAF4-205ENST00000472318 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 SLURP2P0DP57 97 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 POU4F2Q12837 409 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 AFAP1Q8N556 730 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 CNKSR1Q969H4 720 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
SCAF4-205ENST00000472318 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
SCAF4-205ENST00000472318 SOX11P35716 441 aa11.23□□□□□ -0.61
SCAF4-205ENST00000472318 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
SCAF4-205ENST00000472318 COG6Q9Y2V7 657 aa11.23□□□□□ -0.61
SCAF4-205ENST00000472318 PLCH2O75038 1416 aa11.22□□□□□ -0.61
SCAF4-205ENST00000472318 PLA2R1Q13018 1463 aa11.22□□□□□ -0.61
SCAF4-205ENST00000472318 USP4Q13107 963 aa11.22□□□□□ -0.61
SCAF4-205ENST00000472318 NPATQ14207 1427 aa11.21□□□□□ -0.61
SCAF4-205ENST00000472318 WASLO00401 505 aaPredicted RBP11.21□□□□□ -0.61
SCAF4-205ENST00000472318 GAS6Q14393 721 aa11.21□□□□□ -0.61
SCAF4-205ENST00000472318 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
SCAF4-205ENST00000472318 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
SCAF4-205ENST00000472318 CENPCQ03188 943 aa11.2□□□□□ -0.62
SCAF4-205ENST00000472318 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
SCAF4-205ENST00000472318 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
SCAF4-205ENST00000472318 PTPRKQ15262 1439 aa11.19□□□□□ -0.62
SCAF4-205ENST00000472318 OXLD1Q5BKU9 147 aa11.19□□□□□ -0.62
SCAF4-205ENST00000472318 ESCO1Q5FWF5 840 aa11.19□□□□□ -0.62
SCAF4-205ENST00000472318 ZNF385CQ66K41 422 aaPredicted RBP11.19□□□□□ -0.62
SCAF4-205ENST00000472318 CPS1P31327 1500 aa11.19□□□□□ -0.62
SCAF4-205ENST00000472318 AGLP35573 1532 aa11.19□□□□□ -0.62
SCAF4-205ENST00000472318 SHANK2Q9UPX8 1470 aa11.19□□□□□ -0.62
SCAF4-205ENST00000472318 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 SEMA3FQ13275 785 aa11.18□□□□□ -0.62
SCAF4-205ENST00000472318 DBN1Q16643 649 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms