RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 EIF4A1P60842 406 aaKnown RBP19.71■□□□□ 0.75
SNX13-205ENST00000471744 GNAI1P63096 354 aa19.71■□□□□ 0.75
SNX13-205ENST00000471744 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
SNX13-205ENST00000471744 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
SNX13-205ENST00000471744 WWC1Q8IX03 1113 aa19.7■□□□□ 0.74
SNX13-205ENST00000471744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.69■□□□□ 0.74
SNX13-205ENST00000471744 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
SNX13-205ENST00000471744 IL16Q14005 1332 aa19.69■□□□□ 0.74
SNX13-205ENST00000471744 ZNF853P0CG23 659 aa19.68■□□□□ 0.74
SNX13-205ENST00000471744 INTS5Q6P9B9 1019 aaKnown RBP19.68■□□□□ 0.74
SNX13-205ENST00000471744 COL23A1Q86Y22 540 aaPredicted RBP19.68■□□□□ 0.74
SNX13-205ENST00000471744 MTFR1LQ9H019 292 aa19.68■□□□□ 0.74
SNX13-205ENST00000471744 LRP5O75197 1615 aa19.68■□□□□ 0.74
SNX13-205ENST00000471744 GIGYF1O75420 1035 aaPredicted RBP19.67■□□□□ 0.74
SNX13-205ENST00000471744 PHF14O94880 888 aa19.67■□□□□ 0.74
SNX13-205ENST00000471744 TRAPPC3LQ5T215 181 aa19.67■□□□□ 0.74
SNX13-205ENST00000471744 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
SNX13-205ENST00000471744 SPON1Q9HCB6 807 aa19.67■□□□□ 0.74
SNX13-205ENST00000471744 PDGFDQ9GZP0 370 aaPredicted RBP19.65■□□□□ 0.74
SNX13-205ENST00000471744 MBIPQ9NS73 344 aa19.65■□□□□ 0.74
SNX13-205ENST00000471744 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
SNX13-205ENST00000471744 USP16Q9Y5T5 823 aa19.65■□□□□ 0.74
SNX13-205ENST00000471744 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
SNX13-205ENST00000471744 C4AP0C0L4 1744 aa19.65■□□□□ 0.74
SNX13-205ENST00000471744 COL24A1Q17RW2 1714 aa19.65■□□□□ 0.74
SNX13-205ENST00000471744 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
SNX13-205ENST00000471744 A0A087WZG4 1122 aa19.63■□□□□ 0.73
SNX13-205ENST00000471744 ZBTB7AO95365 584 aa19.63■□□□□ 0.73
SNX13-205ENST00000471744 HOXB7P09629 217 aa19.63■□□□□ 0.73
SNX13-205ENST00000471744 RFC4P35249 363 aa19.63■□□□□ 0.73
SNX13-205ENST00000471744 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
SNX13-205ENST00000471744 AMIGO3Q86WK7 504 aa19.63■□□□□ 0.73
SNX13-205ENST00000471744 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
SNX13-205ENST00000471744 COL15A1P39059 1388 aa19.62■□□□□ 0.73
SNX13-205ENST00000471744 ERBB4Q15303 1308 aa19.62■□□□□ 0.73
SNX13-205ENST00000471744 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
SNX13-205ENST00000471744 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
SNX13-205ENST00000471744 CANXP27824 592 aaKnown RBP19.62■□□□□ 0.73
SNX13-205ENST00000471744 ARHGEF1Q92888 912 aaKnown RBP19.62■□□□□ 0.73
SNX13-205ENST00000471744 A1BGP04217 495 aa19.61■□□□□ 0.73
SNX13-205ENST00000471744 EIF5P55010 431 aaKnown RBP19.61■□□□□ 0.73
SNX13-205ENST00000471744 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
SNX13-205ENST00000471744 ZPR1O75312 459 aa19.59■□□□□ 0.73
SNX13-205ENST00000471744 POLD1P28340 1107 aa19.59■□□□□ 0.73
SNX13-205ENST00000471744 ATF5Q9Y2D1 282 aaPredicted RBP19.59■□□□□ 0.73
SNX13-205ENST00000471744 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
SNX13-205ENST00000471744 USP42Q9H9J4 1324 aaKnown RBP19.58■□□□□ 0.73
SNX13-205ENST00000471744 SMIM5Q71RC9 77 aa19.58■□□□□ 0.72
SNX13-205ENST00000471744 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
SNX13-205ENST00000471744 DUSP27Q5VZP5 1158 aa19.57■□□□□ 0.72
SNX13-205ENST00000471744 NLGN1Q8N2Q7 840 aa19.57■□□□□ 0.72
SNX13-205ENST00000471744 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
SNX13-205ENST00000471744 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
SNX13-205ENST00000471744 PTGER2P43116 358 aa19.56■□□□□ 0.72
SNX13-205ENST00000471744 SGIP1Q9BQI5 828 aa19.56■□□□□ 0.72
SNX13-205ENST00000471744 ZNF330Q9Y3S2 320 aaPredicted RBP19.56■□□□□ 0.72
SNX13-205ENST00000471744 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
SNX13-205ENST00000471744 GYS1P13807 737 aa19.55■□□□□ 0.72
SNX13-205ENST00000471744 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
SNX13-205ENST00000471744 KRT24Q2M2I5 525 aa19.55■□□□□ 0.72
SNX13-205ENST00000471744 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
SNX13-205ENST00000471744 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
SNX13-205ENST00000471744 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
SNX13-205ENST00000471744 PPP1R1BQ9UD71 204 aaPredicted RBP19.55■□□□□ 0.72
SNX13-205ENST00000471744 SCN7AQ01118 1682 aa19.55■□□□□ 0.72
SNX13-205ENST00000471744 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
SNX13-205ENST00000471744 CACNA1FO60840 1977 aa19.54■□□□□ 0.72
SNX13-205ENST00000471744 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
SNX13-205ENST00000471744 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
SNX13-205ENST00000471744 BCORQ6W2J9 1755 aa19.54■□□□□ 0.72
SNX13-205ENST00000471744 RGL2O15211 777 aa19.53■□□□□ 0.72
SNX13-205ENST00000471744 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
SNX13-205ENST00000471744 SRP68Q9UHB9 627 aaKnown RBP19.53■□□□□ 0.72
SNX13-205ENST00000471744 E9PSI1 815 aa19.52■□□□□ 0.72
SNX13-205ENST00000471744 PIP4K2AP48426 406 aaPredicted RBP19.52■□□□□ 0.72
SNX13-205ENST00000471744 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
SNX13-205ENST00000471744 DDX21Q9NR30 783 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNX13-205ENST00000471744 C8orf58Q8NAV2 365 aa19.51■□□□□ 0.71
SNX13-205ENST00000471744 ARXQ96QS3 562 aa19.51■□□□□ 0.71
SNX13-205ENST00000471744 DBF4Q9UBU7 674 aaPredicted RBP19.51■□□□□ 0.71
SNX13-205ENST00000471744 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
SNX13-205ENST00000471744 MYL6BP14649 208 aa19.5■□□□□ 0.71
SNX13-205ENST00000471744 PDIA6Q15084 440 aa19.5■□□□□ 0.71
SNX13-205ENST00000471744 TWISTNBQ3B726 338 aaPredicted RBP19.5■□□□□ 0.71
SNX13-205ENST00000471744 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
SNX13-205ENST00000471744 CLEC4GQ6UXB4 293 aa19.5■□□□□ 0.71
SNX13-205ENST00000471744 ZNF652Q9Y2D9 606 aa19.5■□□□□ 0.71
SNX13-205ENST00000471744 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
SNX13-205ENST00000471744 CAMTA2O94983 1202 aa19.49■□□□□ 0.71
SNX13-205ENST00000471744 MMP10P09238 476 aa19.49■□□□□ 0.71
SNX13-205ENST00000471744 FKBP8Q14318 412 aa19.49■□□□□ 0.71
SNX13-205ENST00000471744 KIF6Q6ZMV9 814 aa19.49■□□□□ 0.71
SNX13-205ENST00000471744 NECTIN2Q92692 538 aa19.49■□□□□ 0.71
SNX13-205ENST00000471744 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
SNX13-205ENST00000471744 ERVV-1B6SEH8 477 aa19.48■□□□□ 0.71
SNX13-205ENST00000471744 HNRNPUQ00839 825 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNX13-205ENST00000471744 HYPKQ9NX55 129 aa19.48■□□□□ 0.71
SNX13-205ENST00000471744 CHPF2Q9P2E5 772 aa19.48■□□□□ 0.71
SNX13-205ENST00000471744 NUP98P52948 1817 aa19.48■□□□□ 0.71
SNX13-205ENST00000471744 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms