RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 DNAJC10Q8IXB1 793 aa18.19■□□□□ 0.5
SSR4-207ENST00000471724 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
SSR4-207ENST00000471724 KCNQ4P56696 695 aa18.18■□□□□ 0.5
SSR4-207ENST00000471724 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
SSR4-207ENST00000471724 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
SSR4-207ENST00000471724 AK7Q96M32 723 aa18.17■□□□□ 0.5
SSR4-207ENST00000471724 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
SSR4-207ENST00000471724 SPON1Q9HCB6 807 aa18.17■□□□□ 0.5
SSR4-207ENST00000471724 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
SSR4-207ENST00000471724 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
SSR4-207ENST00000471724 CYP19A1P11511 503 aaPredicted RBP18.16■□□□□ 0.5
SSR4-207ENST00000471724 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
SSR4-207ENST00000471724 ERBB4Q15303 1308 aa18.16■□□□□ 0.5
SSR4-207ENST00000471724 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
SSR4-207ENST00000471724 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
SSR4-207ENST00000471724 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
SSR4-207ENST00000471724 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
SSR4-207ENST00000471724 SCN7AQ01118 1682 aa18.14■□□□□ 0.49
SSR4-207ENST00000471724 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
SSR4-207ENST00000471724 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
SSR4-207ENST00000471724 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
SSR4-207ENST00000471724 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
SSR4-207ENST00000471724 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
SSR4-207ENST00000471724 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
SSR4-207ENST00000471724 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
SSR4-207ENST00000471724 GNPATO15228 680 aa18.12■□□□□ 0.49
SSR4-207ENST00000471724 EXOSC9Q06265 439 aaKnown RBP18.12■□□□□ 0.49
SSR4-207ENST00000471724 ZNF827Q17R98 1081 aa18.12■□□□□ 0.49
SSR4-207ENST00000471724 TRMT2AQ8IZ69 625 aaKnown RBP18.12■□□□□ 0.49
SSR4-207ENST00000471724 TFCP2L1Q9NZI6 479 aa18.12■□□□□ 0.49
SSR4-207ENST00000471724 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
SSR4-207ENST00000471724 SSFA2P28290 1259 aa18.11■□□□□ 0.49
SSR4-207ENST00000471724 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
SSR4-207ENST00000471724 FLAD1Q8NFF5 587 aa18.11■□□□□ 0.49
SSR4-207ENST00000471724 MTFR1LQ9H019 292 aa18.11■□□□□ 0.49
SSR4-207ENST00000471724 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
SSR4-207ENST00000471724 COL15A1P39059 1388 aa18.1■□□□□ 0.49
SSR4-207ENST00000471724 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
SSR4-207ENST00000471724 ADRA2BP18089 450 aa18.1■□□□□ 0.49
SSR4-207ENST00000471724 INTS5Q6P9B9 1019 aaKnown RBP18.1■□□□□ 0.49
SSR4-207ENST00000471724 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
SSR4-207ENST00000471724 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
SSR4-207ENST00000471724 ELL2O00472 640 aaPredicted RBP18.09■□□□□ 0.49
SSR4-207ENST00000471724 CT47B1P0C2W7 299 aaPredicted RBP18.09■□□□□ 0.49
SSR4-207ENST00000471724 EIF2S2P20042 333 aaKnown RBP18.09■□□□□ 0.49
SSR4-207ENST00000471724 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
SSR4-207ENST00000471724 CCDC30Q5VVM6 783 aa18.09■□□□□ 0.49
SSR4-207ENST00000471724 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
SSR4-207ENST00000471724 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
SSR4-207ENST00000471724 PPP1R1BQ9UD71 204 aaPredicted RBP18.09■□□□□ 0.49
SSR4-207ENST00000471724 ZBTB7AO95365 584 aa18.08■□□□□ 0.48
SSR4-207ENST00000471724 ZNF428Q96B54 188 aa18.08■□□□□ 0.48
SSR4-207ENST00000471724 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
SSR4-207ENST00000471724 A1BGP04217 495 aa18.07■□□□□ 0.48
SSR4-207ENST00000471724 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
SSR4-207ENST00000471724 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
SSR4-207ENST00000471724 PDGFDQ9GZP0 370 aaPredicted RBP18.07■□□□□ 0.48
SSR4-207ENST00000471724 DBF4Q9UBU7 674 aaPredicted RBP18.07■□□□□ 0.48
SSR4-207ENST00000471724 ANKRD36CQ5JPF3 1778 aa18.07■□□□□ 0.48
SSR4-207ENST00000471724 A0A087WZG4 1122 aa18.06■□□□□ 0.48
SSR4-207ENST00000471724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
SSR4-207ENST00000471724 PHF14O94880 888 aa18.06■□□□□ 0.48
SSR4-207ENST00000471724 DDX21Q9NR30 783 aaKnown RBP eCLIP18.06■□□□□ 0.48
SSR4-207ENST00000471724 ARFGEF2Q9Y6D5 1785 aa18.06■□□□□ 0.48
SSR4-207ENST00000471724 NBPF26B4DH59 902 aa18.05■□□□□ 0.48
SSR4-207ENST00000471724 VAMP4O75379 141 aa18.05■□□□□ 0.48
SSR4-207ENST00000471724 NBPF10Q6P3W6 841 aaKnown RBP18.05■□□□□ 0.48
SSR4-207ENST00000471724 NBPF15Q8N660 670 aa18.05■□□□□ 0.48
SSR4-207ENST00000471724 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
SSR4-207ENST00000471724 CHPF2Q9P2E5 772 aa18.05■□□□□ 0.48
SSR4-207ENST00000471724 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
SSR4-207ENST00000471724 COL24A1Q17RW2 1714 aa18.05■□□□□ 0.48
SSR4-207ENST00000471724 EIF5P55010 431 aaKnown RBP18.04■□□□□ 0.48
SSR4-207ENST00000471724 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
SSR4-207ENST00000471724 HYPKQ9NX55 129 aa18.04■□□□□ 0.48
SSR4-207ENST00000471724 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
SSR4-207ENST00000471724 NUP98P52948 1817 aa18.04■□□□□ 0.48
SSR4-207ENST00000471724 MYL6BP14649 208 aa18.03■□□□□ 0.48
SSR4-207ENST00000471724 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
SSR4-207ENST00000471724 MSH5O43196 834 aa18.02■□□□□ 0.48
SSR4-207ENST00000471724 RFC4P35249 363 aa18.02■□□□□ 0.48
SSR4-207ENST00000471724 PTGER2P43116 358 aa18.02■□□□□ 0.48
SSR4-207ENST00000471724 PDIA6Q15084 440 aa18.02■□□□□ 0.48
SSR4-207ENST00000471724 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
SSR4-207ENST00000471724 POLD1P28340 1107 aa18.01■□□□□ 0.47
SSR4-207ENST00000471724 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
SSR4-207ENST00000471724 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
SSR4-207ENST00000471724 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
SSR4-207ENST00000471724 SRCAPQ6ZRS2 3230 aa18■□□□□ 0.47
SSR4-207ENST00000471724 RGL2O15211 777 aa18■□□□□ 0.47
SSR4-207ENST00000471724 ZPR1O75312 459 aa18■□□□□ 0.47
SSR4-207ENST00000471724 PROSER3Q2NL68 480 aa18■□□□□ 0.47
SSR4-207ENST00000471724 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
SSR4-207ENST00000471724 LRP10Q7Z4F1 713 aa18■□□□□ 0.47
SSR4-207ENST00000471724 COL23A1Q86Y22 540 aaPredicted RBP18■□□□□ 0.47
SSR4-207ENST00000471724 ARHGEF1Q92888 912 aaKnown RBP18■□□□□ 0.47
SSR4-207ENST00000471724 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
SSR4-207ENST00000471724 ANXA1P04083 346 aa17.99■□□□□ 0.47
SSR4-207ENST00000471724 SGIP1Q9BQI5 828 aa17.99■□□□□ 0.47
SSR4-207ENST00000471724 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms