RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
HSPG2-208ENST00000471322 SLC15A2Q16348 729 aa22.33■■□□□ 1.17
HSPG2-208ENST00000471322 CEMIPQ8WUJ3 1361 aa22.33■■□□□ 1.16
HSPG2-208ENST00000471322 ITPK1Q13572 414 aa22.32■■□□□ 1.16
HSPG2-208ENST00000471322 KIF16BQ96L93 1317 aa22.32■■□□□ 1.16
HSPG2-208ENST00000471322 DLG5Q8TDM6 1919 aa22.32■■□□□ 1.16
HSPG2-208ENST00000471322 VAMP4O75379 141 aa22.31■■□□□ 1.16
HSPG2-208ENST00000471322 BCL2L13Q9BXK5 485 aa22.31■■□□□ 1.16
HSPG2-208ENST00000471322 PAPPAQ13219 1627 aa22.3■■□□□ 1.16
HSPG2-208ENST00000471322 SMIM5Q71RC9 77 aa22.3■■□□□ 1.16
HSPG2-208ENST00000471322 LINC00116Q8NCU8 138 aa22.3■■□□□ 1.16
HSPG2-208ENST00000471322 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
HSPG2-208ENST00000471322 MIS18AQ9NYP9 233 aa22.3■■□□□ 1.16
HSPG2-208ENST00000471322 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
HSPG2-208ENST00000471322 BTBD11A6QL63 1104 aa22.28■■□□□ 1.16
HSPG2-208ENST00000471322 KCNQ3O43525 872 aa22.28■■□□□ 1.16
HSPG2-208ENST00000471322 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
HSPG2-208ENST00000471322 PANK1Q8TE04 598 aa22.28■■□□□ 1.16
HSPG2-208ENST00000471322 BABAM1Q9NWV8 329 aa22.28■■□□□ 1.16
HSPG2-208ENST00000471322 DZIP1LQ8IYY4 767 aaKnown RBP22.28■■□□□ 1.16
HSPG2-208ENST00000471322 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
HSPG2-208ENST00000471322 C5P01031 1676 aa22.27■■□□□ 1.16
HSPG2-208ENST00000471322 ZNF790Q6PG37 636 aa22.27■■□□□ 1.16
HSPG2-208ENST00000471322 ATF7IPQ6VMQ6 1270 aa22.27■■□□□ 1.16
HSPG2-208ENST00000471322 FTSJ3Q8IY81 847 aaKnown RBP22.27■■□□□ 1.16
HSPG2-208ENST00000471322 AMIGO3Q86WK7 504 aa22.25■■□□□ 1.15
HSPG2-208ENST00000471322 C8orf58Q8NAV2 365 aa22.25■■□□□ 1.15
HSPG2-208ENST00000471322 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
HSPG2-208ENST00000471322 COG6Q9Y2V7 657 aa22.25■■□□□ 1.15
HSPG2-208ENST00000471322 SIPA1L3O60292 1781 aaPredicted RBP22.25■■□□□ 1.15
HSPG2-208ENST00000471322 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
HSPG2-208ENST00000471322 TSPYL6Q8N831 410 aa22.24■■□□□ 1.15
HSPG2-208ENST00000471322 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
HSPG2-208ENST00000471322 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
HSPG2-208ENST00000471322 AK7Q96M32 723 aa22.24■■□□□ 1.15
HSPG2-208ENST00000471322 PHF14O94880 888 aa22.24■■□□□ 1.15
HSPG2-208ENST00000471322 TAF7Q15545 349 aaPredicted RBP22.24■■□□□ 1.15
HSPG2-208ENST00000471322 KCPQ6ZWJ8 1503 aa22.23■■□□□ 1.15
HSPG2-208ENST00000471322 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
HSPG2-208ENST00000471322 CENPQQ7L2Z9 268 aaPredicted RBP22.23■■□□□ 1.15
HSPG2-208ENST00000471322 DNAJC10Q8IXB1 793 aa22.23■■□□□ 1.15
HSPG2-208ENST00000471322 TSPYL4Q9UJ04 414 aa22.23■■□□□ 1.15
HSPG2-208ENST00000471322 C4BP0C0L5 1744 aa22.22■■□□□ 1.15
HSPG2-208ENST00000471322 MSH5O43196 834 aa22.22■■□□□ 1.15
HSPG2-208ENST00000471322 TRIM27P14373 513 aa22.22■■□□□ 1.15
HSPG2-208ENST00000471322 MVPQ14764 893 aaKnown RBP22.22■■□□□ 1.15
HSPG2-208ENST00000471322 MRPL50Q8N5N7 158 aaKnown RBP22.22■■□□□ 1.15
HSPG2-208ENST00000471322 CLUAP1Q96AJ1 413 aa22.22■■□□□ 1.15
HSPG2-208ENST00000471322 PNPLA7Q6ZV29 1317 aa22.22■■□□□ 1.15
HSPG2-208ENST00000471322 GNPATO15228 680 aa22.21■■□□□ 1.15
HSPG2-208ENST00000471322 RLBP1P12271 317 aa22.21■■□□□ 1.15
HSPG2-208ENST00000471322 TSHZ2Q9NRE2 1034 aa22.21■■□□□ 1.15
HSPG2-208ENST00000471322 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.15
HSPG2-208ENST00000471322 ELL2O00472 640 aaPredicted RBP22.2■■□□□ 1.15
HSPG2-208ENST00000471322 TUBGCP6Q96RT7 1819 aa22.19■■□□□ 1.14
HSPG2-208ENST00000471322 CRKLP46109 303 aaKnown RBP22.19■■□□□ 1.14
HSPG2-208ENST00000471322 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
HSPG2-208ENST00000471322 DDX19BQ9UMR2 479 aa22.19■■□□□ 1.14
HSPG2-208ENST00000471322 ATF5Q9Y2D1 282 aaPredicted RBP22.19■■□□□ 1.14
HSPG2-208ENST00000471322 GOLGB1Q14789 3259 aaKnown RBP22.19■■□□□ 1.14
HSPG2-208ENST00000471322 KDM2BQ8NHM5 1336 aa22.18■■□□□ 1.14
HSPG2-208ENST00000471322 PRAMEF22A3QJZ6 481 aa22.18■■□□□ 1.14
HSPG2-208ENST00000471322 FMNL2Q96PY5 1086 aa22.18■■□□□ 1.14
HSPG2-208ENST00000471322 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.17■■□□□ 1.14
HSPG2-208ENST00000471322 CHMP4BQ9H444 224 aaKnown RBP22.17■■□□□ 1.14
HSPG2-208ENST00000471322 UBR2Q8IWV8 1755 aa22.17■■□□□ 1.14
HSPG2-208ENST00000471322 TJP1Q07157 1748 aa22.17■■□□□ 1.14
HSPG2-208ENST00000471322 HEG1Q9ULI3 1381 aa22.17■■□□□ 1.14
HSPG2-208ENST00000471322 API5Q9BZZ5 524 aaKnown RBP22.17■■□□□ 1.14
HSPG2-208ENST00000471322 TNNQ9UQP3 1299 aa22.17■■□□□ 1.14
HSPG2-208ENST00000471322 CYP19A1P11511 503 aaPredicted RBP22.16■■□□□ 1.14
HSPG2-208ENST00000471322 CASZ1Q86V15 1759 aa22.16■■□□□ 1.14
HSPG2-208ENST00000471322 COL5A3P25940 1745 aaPredicted RBP22.15■■□□□ 1.14
HSPG2-208ENST00000471322 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
HSPG2-208ENST00000471322 INTS5Q6P9B9 1019 aaKnown RBP22.14■■□□□ 1.14
HSPG2-208ENST00000471322 VSIG10Q8N0Z9 540 aa22.14■■□□□ 1.14
HSPG2-208ENST00000471322 CHMP4AQ9BY43 222 aa22.14■■□□□ 1.14
HSPG2-208ENST00000471322 RTCBQ9Y3I0 505 aaKnown RBP22.14■■□□□ 1.14
HSPG2-208ENST00000471322 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.13
HSPG2-208ENST00000471322 CNTNAP4Q9C0A0 1308 aa22.14■■□□□ 1.13
HSPG2-208ENST00000471322 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
HSPG2-208ENST00000471322 MSL1Q68DK7 614 aa22.13■■□□□ 1.13
HSPG2-208ENST00000471322 RC3H1Q5TC82 1133 aaKnown RBP22.13■■□□□ 1.13
HSPG2-208ENST00000471322 ITPRIPQ8IWB1 547 aa22.13■■□□□ 1.13
HSPG2-208ENST00000471322 USP16Q9Y5T5 823 aa22.13■■□□□ 1.13
HSPG2-208ENST00000471322 UBR3Q6ZT12 1888 aa22.13■■□□□ 1.13
HSPG2-208ENST00000471322 TCERG1O14776 1098 aaKnown RBP22.12■■□□□ 1.13
HSPG2-208ENST00000471322 PIP4K2AP48426 406 aaPredicted RBP22.12■■□□□ 1.13
HSPG2-208ENST00000471322 SPON1Q9HCB6 807 aa22.12■■□□□ 1.13
HSPG2-208ENST00000471322 CCDC87Q9NVE4 849 aa22.12■■□□□ 1.13
HSPG2-208ENST00000471322 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
HSPG2-208ENST00000471322 UTRNP46939 3433 aa22.11■■□□□ 1.13
HSPG2-208ENST00000471322 STARD3NLO95772 234 aa22.11■■□□□ 1.13
HSPG2-208ENST00000471322 SSFA2P28290 1259 aa22.11■■□□□ 1.13
HSPG2-208ENST00000471322 EIF4A1P60842 406 aaKnown RBP22.11■■□□□ 1.13
HSPG2-208ENST00000471322 TMEM57Q8N5G2 664 aa22.11■■□□□ 1.13
HSPG2-208ENST00000471322 RPS6KA4O75676 772 aa22.1■■□□□ 1.13
HSPG2-208ENST00000471322 A1BGP04217 495 aa22.1■■□□□ 1.13
HSPG2-208ENST00000471322 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
HSPG2-208ENST00000471322 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms