RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
FDPS-209ENST00000471117 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
FDPS-209ENST00000471117 NBPF4Q96M43 638 aa10.86□□□□□ -0.67
FDPS-209ENST00000471117 NLRP2Q9NX02 1062 aa10.86□□□□□ -0.67
FDPS-209ENST00000471117 C5P01031 1676 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 DOT1LQ8TEK3 1739 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 PHF14O94880 888 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
FDPS-209ENST00000471117 RIPK4P57078 832 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 USHBP1Q8N6Y0 703 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 KIF13BQ9NQT8 1826 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 CNTNAP1P78357 1384 aa10.85□□□□□ -0.67
FDPS-209ENST00000471117 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
FDPS-209ENST00000471117 NCAPD2Q15021 1401 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 IL2RBP14784 551 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 DPEP1P16444 411 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 RRP1P56182 461 aaKnown RBP10.84□□□□□ -0.67
FDPS-209ENST00000471117 NFE2L2Q16236 605 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 AMIGO3Q86WK7 504 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 PHACTR3Q96KR7 559 aa10.84□□□□□ -0.67
FDPS-209ENST00000471117 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
FDPS-209ENST00000471117 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
FDPS-209ENST00000471117 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
FDPS-209ENST00000471117 RAPGEF4Q8WZA2 1011 aa10.82□□□□□ -0.68
FDPS-209ENST00000471117 CASP8AP2Q9UKL3 1982 aa10.82□□□□□ -0.68
FDPS-209ENST00000471117 CCDC88AQ3V6T2 1871 aa10.82□□□□□ -0.68
FDPS-209ENST00000471117 TATP17735 454 aaPredicted RBP10.81□□□□□ -0.68
FDPS-209ENST00000471117 PLEKHO1Q53GL0 409 aaPredicted RBP10.81□□□□□ -0.68
FDPS-209ENST00000471117 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
FDPS-209ENST00000471117 IL16Q14005 1332 aa10.81□□□□□ -0.68
FDPS-209ENST00000471117 TOGARAM1Q9Y4F4 1720 aa10.81□□□□□ -0.68
FDPS-209ENST00000471117 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
FDPS-209ENST00000471117 TGFB2P61812 414 aa10.8□□□□□ -0.68
FDPS-209ENST00000471117 AMOTQ4VCS5 1084 aa10.8□□□□□ -0.68
FDPS-209ENST00000471117 PPP4R2Q9NY27 417 aa10.8□□□□□ -0.68
FDPS-209ENST00000471117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.79□□□□□ -0.68
FDPS-209ENST00000471117 MMP10P09238 476 aa10.79□□□□□ -0.68
FDPS-209ENST00000471117 CALD1Q05682 793 aaKnown RBP10.79□□□□□ -0.68
FDPS-209ENST00000471117 MTHFSDQ2M296 383 aaKnown RBP10.79□□□□□ -0.68
FDPS-209ENST00000471117 AK7Q96M32 723 aa10.79□□□□□ -0.68
FDPS-209ENST00000471117 MCOLN1Q9GZU1 580 aa10.79□□□□□ -0.68
FDPS-209ENST00000471117 GLTPD2A6NH11 291 aa10.78□□□□□ -0.68
FDPS-209ENST00000471117 PLIN1O60240 522 aa10.78□□□□□ -0.68
FDPS-209ENST00000471117 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
FDPS-209ENST00000471117 SPG7Q9UQ90 795 aa10.78□□□□□ -0.68
FDPS-209ENST00000471117 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
FDPS-209ENST00000471117 CUL9Q8IWT3 2517 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 GNAT3A8MTJ3 354 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 POTECB2RU33 542 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 HTATSF1O43719 755 aaKnown RBP10.77□□□□□ -0.69
FDPS-209ENST00000471117 C1orf141Q5JVX7 400 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 ZNF530Q6P9A1 599 aaPredicted RBP10.77□□□□□ -0.69
FDPS-209ENST00000471117 TSR2Q969E8 191 aaKnown RBP10.77□□□□□ -0.69
FDPS-209ENST00000471117 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
FDPS-209ENST00000471117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.691e-8■□□□□ 9.7
FDPS-209ENST00000471117 TSKSQ9UJT2 592 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 MEGF6O75095 1541 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 FANCIQ9NVI1 1328 aa10.77□□□□□ -0.69
FDPS-209ENST00000471117 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 KCNA3P22001 575 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 SOX10P56693 466 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 RASSF7Q02833 373 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 AKAP4Q5JQC9 854 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.76□□□□□ -0.69
FDPS-209ENST00000471117 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
FDPS-209ENST00000471117 DLL1O00548 723 aa10.75□□□□□ -0.69
FDPS-209ENST00000471117 BCAR3O75815 825 aa10.75□□□□□ -0.69
FDPS-209ENST00000471117 EXOSC9Q06265 439 aaKnown RBP10.75□□□□□ -0.69
FDPS-209ENST00000471117 LAS1LQ9Y4W2 734 aaKnown RBP10.75□□□□□ -0.69
FDPS-209ENST00000471117 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
FDPS-209ENST00000471117 CT47B1P0C2W7 299 aaPredicted RBP10.74□□□□□ -0.69
FDPS-209ENST00000471117 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 RARSP54136 660 aaKnown RBP10.74□□□□□ -0.69
FDPS-209ENST00000471117 GNAI1P63096 354 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 MAP2K1Q02750 393 aaPredicted RBP10.74□□□□□ -0.69
FDPS-209ENST00000471117 DCTN1Q14203 1278 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 DALRD3Q5D0E6 543 aaKnown RBP10.74□□□□□ -0.69
FDPS-209ENST00000471117 MCM10Q7L590 875 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 EXOC6Q8TAG9 804 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 IFT57Q9NWB7 429 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 PIM2Q9P1W9 311 aa10.74□□□□□ -0.69
FDPS-209ENST00000471117 TIAM2Q8IVF5 1701 aa10.73□□□□□ -0.69
FDPS-209ENST00000471117 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
FDPS-209ENST00000471117 B4GALNT3Q6L9W6 998 aa10.73□□□□□ -0.69
FDPS-209ENST00000471117 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
FDPS-209ENST00000471117 ZCRB1Q8TBF4 217 aaKnown RBP10.73□□□□□ -0.69
FDPS-209ENST00000471117 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
FDPS-209ENST00000471117 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
FDPS-209ENST00000471117 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
FDPS-209ENST00000471117 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
FDPS-209ENST00000471117 DGKZQ13574 1117 aa10.72□□□□□ -0.69
FDPS-209ENST00000471117 CCDC87Q9NVE4 849 aa10.72□□□□□ -0.69
FDPS-209ENST00000471117 PCDH11XQ9BZA7 1347 aa10.72□□□□□ -0.69
FDPS-209ENST00000471117 PCDH11YQ9BZA8 1340 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms